RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
CHD8-213ENST00000557364 CUBNO60494 3623 aa3.57□□□□□ -1.84
CHD8-213ENST00000557364 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
CHD8-213ENST00000557364 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
CHD8-213ENST00000557364 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CHD8-213ENST00000557364 MT1HP80294 61 aa3.4□□□□□ -1.86
CHD8-213ENST00000557364 SPRR2GQ9BYE4 73 aa3.4□□□□□ -1.87
CHD8-213ENST00000557364 LORP23490 312 aaPredicted RBP3.38□□□□□ -1.87
CHD8-213ENST00000557364 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
CHD8-213ENST00000557364 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
CHD8-213ENST00000557364 MT2AP02795 61 aa3.33□□□□□ -1.88
CHD8-213ENST00000557364 DNAH9Q9NYC9 4486 aa3.31□□□□□ -1.88
CHD8-213ENST00000557364 LYSTQ99698 3801 aa3.3□□□□□ -1.88
CHD8-213ENST00000557364 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
CHD8-213ENST00000557364 CSMD3Q7Z407 3707 aa3.29□□□□□ -1.88
CHD8-213ENST00000557364 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
CHD8-213ENST00000557364 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
CHD8-213ENST00000557364 DNAH10Q8IVF4 4471 aa3.26□□□□□ -1.89
CHD8-213ENST00000557364 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
CHD8-213ENST00000557364 FRAS1Q86XX4 4008 aa3.25□□□□□ -1.89
CHD8-213ENST00000557364 DNAH7Q8WXX0 4024 aa3.25□□□□□ -1.89
CHD8-213ENST00000557364 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
CHD8-213ENST00000557364 DNAH6Q9C0G6 4158 aa3.24□□□□□ -1.89
CHD8-213ENST00000557364 DNAH11Q96DT5 4516 aa3.24□□□□□ -1.89
CHD8-213ENST00000557364 DNAH5Q8TE73 4624 aa3.23□□□□□ -1.89
CHD8-213ENST00000557364 FAT2Q9NYQ8 4349 aa3.21□□□□□ -1.9
CHD8-213ENST00000557364 MT1FP04733 61 aa3.2□□□□□ -1.9
CHD8-213ENST00000557364 ANK2Q01484 3957 aa3.18□□□□□ -1.9
CHD8-213ENST00000557364 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
CHD8-213ENST00000557364 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
CHD8-213ENST00000557364 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CHD8-213ENST00000557364 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
CHD8-213ENST00000557364 PLECQ15149 4684 aaKnown RBP3.15□□□□□ -1.91
CHD8-213ENST00000557364 SPRR2EP22531 72 aa3.14□□□□□ -1.91
CHD8-213ENST00000557364 SPRR2BP35325 72 aa3.14□□□□□ -1.91
CHD8-213ENST00000557364 SPRR2AP35326 72 aa3.14□□□□□ -1.91
CHD8-213ENST00000557364 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
CHD8-213ENST00000557364 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
CHD8-213ENST00000557364 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
CHD8-213ENST00000557364 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
CHD8-213ENST00000557364 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
CHD8-213ENST00000557364 DYNC1H1Q14204 4646 aaKnown RBP3.08□□□□□ -1.92
CHD8-213ENST00000557364 LCE2BO14633 110 aa3.07□□□□□ -1.92
CHD8-213ENST00000557364 SPRR2DP22532 72 aa3.07□□□□□ -1.92
CHD8-213ENST00000557364 PRKDCP78527 4128 aaKnown RBP3.06□□□□□ -1.92
CHD8-213ENST00000557364 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
CHD8-213ENST00000557364 HECTD4Q9Y4D8 3996 aa3.03□□□□□ -1.92
CHD8-213ENST00000557364 LRP1BQ9NZR2 4599 aa3.03□□□□□ -1.92
CHD8-213ENST00000557364 MT1GP13640 62 aa3□□□□□ -1.93
CHD8-213ENST00000557364 DNAH8Q96JB1 4490 aa3□□□□□ -1.93
CHD8-213ENST00000557364 KRTAP19-1Q8IUB9 90 aa2.99□□□□□ -1.93
CHD8-213ENST00000557364 PKHD1L1Q86WI1 4243 aa2.98□□□□□ -1.93
CHD8-213ENST00000557364 STARD9Q9P2P6 4700 aa2.97□□□□□ -1.93
CHD8-213ENST00000557364 SACSQ9NZJ4 4579 aa2.97□□□□□ -1.93
CHD8-213ENST00000557364 MT1XP80297 61 aa2.94□□□□□ -1.94
CHD8-213ENST00000557364 FAT1Q14517 4588 aa2.93□□□□□ -1.94
CHD8-213ENST00000557364 DNHD1Q96M86 4753 aa2.93□□□□□ -1.94
CHD8-213ENST00000557364 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
CHD8-213ENST00000557364 FAT3Q8TDW7 4589 aa2.89□□□□□ -1.95
CHD8-213ENST00000557364 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
CHD8-213ENST00000557364 MT1BP07438 61 aa2.89□□□□□ -1.95
CHD8-213ENST00000557364 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
CHD8-213ENST00000557364 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
CHD8-213ENST00000557364 LCE2CQ5TA81 110 aa2.86□□□□□ -1.95
CHD8-213ENST00000557364 RYR1P21817 5038 aa2.86□□□□□ -1.95
CHD8-213ENST00000557364 PKD1P98161 4303 aa2.85□□□□□ -1.95
CHD8-213ENST00000557364 FLGP20930 4061 aaPredicted RBP2.84□□□□□ -1.95
CHD8-213ENST00000557364 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.96
CHD8-213ENST00000557364 RYR3Q15413 4870 aa2.83□□□□□ -1.96
CHD8-213ENST00000557364 MT1LQ93083 61 aa2.8□□□□□ -1.96
CHD8-213ENST00000557364 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
CHD8-213ENST00000557364 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
CHD8-213ENST00000557364 HSPG2P98160 4391 aa2.8□□□□□ -1.96
CHD8-213ENST00000557364 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
CHD8-213ENST00000557364 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CHD8-213ENST00000557364 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
CHD8-213ENST00000557364 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
CHD8-213ENST00000557364 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
CHD8-213ENST00000557364 KRTAP17-1Q9BYP8 105 aa2.74□□□□□ -1.97
CHD8-213ENST00000557364 RYR2Q92736 4967 aa2.72□□□□□ -1.97
CHD8-213ENST00000557364 MT3P25713 68 aa2.72□□□□□ -1.97
CHD8-213ENST00000557364 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
CHD8-213ENST00000557364 MT1EP04732 61 aa2.71□□□□□ -1.98
CHD8-213ENST00000557364 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
CHD8-213ENST00000557364 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
CHD8-213ENST00000557364 KRTAP9-6A0A140TA67 174 aa2.67□□□□□ -1.98
CHD8-213ENST00000557364 HERC1Q15751 4861 aa2.66□□□□□ -1.98
CHD8-213ENST00000557364 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
CHD8-213ENST00000557364 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CHD8-213ENST00000557364 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
CHD8-213ENST00000557364 MT4P47944 62 aa2.6□□□□□ -1.99
CHD8-213ENST00000557364 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
CHD8-213ENST00000557364 LCE1AQ5T7P2 110 aa2.59□□□□□ -2
CHD8-213ENST00000557364 TNXBP22105 4242 aa2.58□□□□□ -2
CHD8-213ENST00000557364 HERC2O95714 4834 aa2.57□□□□□ -2
CHD8-213ENST00000557364 BIRC6Q9NR09 4857 aa2.57□□□□□ -2
CHD8-213ENST00000557364 LCE2AQ5TA79 106 aaPredicted RBP2.55□□□□□ -2
CHD8-213ENST00000557364 KIAA1109Q2LD37 5005 aa2.54□□□□□ -2
CHD8-213ENST00000557364 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
CHD8-213ENST00000557364 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms