RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 MT2AP02795 61 aa4.82□□□□□ -1.64
NEK9-210ENST00000557026 ANK3Q12955 4377 aaKnown RBP4.82□□□□□ -1.64
NEK9-210ENST00000557026 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
NEK9-210ENST00000557026 CUBNO60494 3623 aa4.8□□□□□ -1.64
NEK9-210ENST00000557026 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
NEK9-210ENST00000557026 DNAH1Q9P2D7 4330 aa4.76□□□□□ -1.65
NEK9-210ENST00000557026 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
NEK9-210ENST00000557026 DNAH2Q9P225 4427 aa4.75□□□□□ -1.65
NEK9-210ENST00000557026 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
NEK9-210ENST00000557026 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
NEK9-210ENST00000557026 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
NEK9-210ENST00000557026 SVEP1Q4LDE5 3571 aa4.68□□□□□ -1.66
NEK9-210ENST00000557026 DNAH11Q96DT5 4516 aa4.67□□□□□ -1.66
NEK9-210ENST00000557026 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
NEK9-210ENST00000557026 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
NEK9-210ENST00000557026 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
NEK9-210ENST00000557026 DNHD1Q96M86 4753 aa4.63□□□□□ -1.67
NEK9-210ENST00000557026 MT1FP04733 61 aa4.61□□□□□ -1.67
NEK9-210ENST00000557026 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
NEK9-210ENST00000557026 HERC1Q15751 4861 aa4.54□□□□□ -1.68
NEK9-210ENST00000557026 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
NEK9-210ENST00000557026 PLECQ15149 4684 aaKnown RBP4.52□□□□□ -1.69
NEK9-210ENST00000557026 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
NEK9-210ENST00000557026 KRTAP19-5Q3LI72 72 aa4.49□□□□□ -1.69
NEK9-210ENST00000557026 ANK2Q01484 3957 aa4.49□□□□□ -1.69
NEK9-210ENST00000557026 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
NEK9-210ENST00000557026 SPRR2EP22531 72 aa4.47□□□□□ -1.69
NEK9-210ENST00000557026 SPRR2BP35325 72 aa4.47□□□□□ -1.69
NEK9-210ENST00000557026 SPRR2AP35326 72 aa4.47□□□□□ -1.69
NEK9-210ENST00000557026 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
NEK9-210ENST00000557026 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
NEK9-210ENST00000557026 DNAH9Q9NYC9 4486 aa4.4□□□□□ -1.71
NEK9-210ENST00000557026 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.71
NEK9-210ENST00000557026 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
NEK9-210ENST00000557026 SPRR2DP22532 72 aa4.38□□□□□ -1.71
NEK9-210ENST00000557026 LCE2BO14633 110 aa4.37□□□□□ -1.71
NEK9-210ENST00000557026 MT1GP13640 62 aa4.36□□□□□ -1.71
NEK9-210ENST00000557026 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
NEK9-210ENST00000557026 HSPG2P98160 4391 aa4.35□□□□□ -1.71
NEK9-210ENST00000557026 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.72
NEK9-210ENST00000557026 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
NEK9-210ENST00000557026 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
NEK9-210ENST00000557026 DNAH17Q9UFH2 4485 aa4.27□□□□□ -1.73
NEK9-210ENST00000557026 PRKDCP78527 4128 aaKnown RBP4.26□□□□□ -1.73
NEK9-210ENST00000557026 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
NEK9-210ENST00000557026 MT1XP80297 61 aa4.22□□□□□ -1.73
NEK9-210ENST00000557026 MT1BP07438 61 aa4.21□□□□□ -1.74
NEK9-210ENST00000557026 KRTAP9-8Q9BYQ0 159 aa4.21□□□□□ -1.74
NEK9-210ENST00000557026 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
NEK9-210ENST00000557026 FAT1Q14517 4588 aa4.19□□□□□ -1.74
NEK9-210ENST00000557026 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
NEK9-210ENST00000557026 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
NEK9-210ENST00000557026 RYR1P21817 5038 aa4.17□□□□□ -1.74
NEK9-210ENST00000557026 SACSQ9NZJ4 4579 aa4.17□□□□□ -1.74
NEK9-210ENST00000557026 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
NEK9-210ENST00000557026 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
NEK9-210ENST00000557026 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
NEK9-210ENST00000557026 CSMD3Q7Z407 3707 aa4.13□□□□□ -1.75
NEK9-210ENST00000557026 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
NEK9-210ENST00000557026 BIRC6Q9NR09 4857 aa4.1□□□□□ -1.75
NEK9-210ENST00000557026 RYR2Q92736 4967 aa4.1□□□□□ -1.75
NEK9-210ENST00000557026 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.75
NEK9-210ENST00000557026 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.76
NEK9-210ENST00000557026 LYSTQ99698 3801 aa4.08□□□□□ -1.76
NEK9-210ENST00000557026 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
NEK9-210ENST00000557026 LCE2DQ5TA82 110 aaPredicted RBP4.08□□□□□ -1.76
NEK9-210ENST00000557026 RYR3Q15413 4870 aa4.07□□□□□ -1.76
NEK9-210ENST00000557026 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
NEK9-210ENST00000557026 MT1LQ93083 61 aa4.05□□□□□ -1.76
NEK9-210ENST00000557026 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
NEK9-210ENST00000557026 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
NEK9-210ENST00000557026 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
NEK9-210ENST00000557026 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
NEK9-210ENST00000557026 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
NEK9-210ENST00000557026 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
NEK9-210ENST00000557026 STARD9Q9P2P6 4700 aa3.95□□□□□ -1.78
NEK9-210ENST00000557026 MT3P25713 68 aa3.94□□□□□ -1.78
NEK9-210ENST00000557026 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
NEK9-210ENST00000557026 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
NEK9-210ENST00000557026 HERC2O95714 4834 aa3.91□□□□□ -1.78
NEK9-210ENST00000557026 MT1EP04732 61 aa3.91□□□□□ -1.78
NEK9-210ENST00000557026 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.78
NEK9-210ENST00000557026 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
NEK9-210ENST00000557026 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
NEK9-210ENST00000557026 PKD1P98161 4303 aa3.89□□□□□ -1.79
NEK9-210ENST00000557026 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
NEK9-210ENST00000557026 LRP2P98164 4655 aa3.89□□□□□ -1.79
NEK9-210ENST00000557026 KRTAP9-6A0A140TA67 174 aa3.86□□□□□ -1.79
NEK9-210ENST00000557026 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
NEK9-210ENST00000557026 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
NEK9-210ENST00000557026 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
NEK9-210ENST00000557026 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
NEK9-210ENST00000557026 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
NEK9-210ENST00000557026 MT1MQ8N339 61 aa3.8□□□□□ -1.8
NEK9-210ENST00000557026 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
NEK9-210ENST00000557026 VPS13BQ7Z7G8 4022 aa3.78□□□□□ -1.8
NEK9-210ENST00000557026 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
NEK9-210ENST00000557026 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
NEK9-210ENST00000557026 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
NEK9-210ENST00000557026 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms