RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 HFM1A2PYH4 1435 aa-4.95□□□□□ -3.2
LINC00648-203ENST00000556923 UMAD1C9J7I0 102 aa-4.96□□□□□ -3.2
LINC00648-203ENST00000556923 FANCAO15360 1455 aa-4.96□□□□□ -3.2
LINC00648-203ENST00000556923 CFAP43Q8NDM7 1665 aa-4.96□□□□□ -3.2
LINC00648-203ENST00000556923 WFDC10BQ8IUB3 73 aa-4.97□□□□□ -3.21
LINC00648-203ENST00000556923 TTC37Q6PGP7 1564 aa-4.97□□□□□ -3.21
LINC00648-203ENST00000556923 EIF2AK4Q9P2K8 1649 aaKnown RBP-4.97□□□□□ -3.21
LINC00648-203ENST00000556923 DEFB104AQ8WTQ1 72 aa-4.98□□□□□ -3.21
LINC00648-203ENST00000556923 DPY30Q9C005 99 aa-4.98□□□□□ -3.21
LINC00648-203ENST00000556923 EPRSP07814 1512 aaKnown RBP-4.98□□□□□ -3.21
LINC00648-203ENST00000556923 SMIM27A0A1W2PRY6 76 aa-4.99□□□□□ -3.21
LINC00648-203ENST00000556923 CORTO00230 105 aa-4.99□□□□□ -3.21
LINC00648-203ENST00000556923 MROH1Q8NDA8 1641 aa-4.99□□□□□ -3.21
LINC00648-203ENST00000556923 VPS8Q8N3P4 1428 aa-5□□□□□ -3.21
LINC00648-203ENST00000556923 GLI2P10070 1586 aa-5□□□□□ -3.21
LINC00648-203ENST00000556923 DIP2AQ14689 1571 aa-5□□□□□ -3.21
LINC00648-203ENST00000556923 GNGT2O14610 69 aa-5.01□□□□□ -3.21
LINC00648-203ENST00000556923 HTN1P15515 57 aa-5.01□□□□□ -3.21
LINC00648-203ENST00000556923 ETDCA0A1B0GVM5 59 aa-5.02□□□□□ -3.21
LINC00648-203ENST00000556923 RBP2P50120 134 aa-5.03□□□□□ -3.21
LINC00648-203ENST00000556923 NREPQ16612 68 aa-5.03□□□□□ -3.21
LINC00648-203ENST00000556923 S100A1P23297 94 aa-5.04□□□□□ -3.22
LINC00648-203ENST00000556923 RABAC1Q9UI14 185 aa-5.04□□□□□ -3.22
LINC00648-203ENST00000556923 CLTCQ00610 1675 aaKnown RBP-5.06□□□□□ -3.22
LINC00648-203ENST00000556923 URB2Q14146 1524 aaKnown RBP-5.07□□□□□ -3.22
LINC00648-203ENST00000556923 HMGN2P05204 90 aaKnown RBP-5.07□□□□□ -3.22
LINC00648-203ENST00000556923 C2orf88Q9BSF0 95 aa-5.08□□□□□ -3.22
LINC00648-203ENST00000556923 RALGAPBQ86X10 1494 aa-5.08□□□□□ -3.22
LINC00648-203ENST00000556923 GOLGB1Q14789 3259 aaKnown RBP-5.08□□□□□ -3.22
LINC00648-203ENST00000556923 RHPN1-AS1Q9BWJ2 59 aa-5.09□□□□□ -3.22
LINC00648-203ENST00000556923 ABCC6O95255 1503 aa-5.09□□□□□ -3.22
LINC00648-203ENST00000556923 AKAP12Q02952 1782 aa-5.09□□□□□ -3.22
LINC00648-203ENST00000556923 S100A12P80511 92 aa-5.1□□□□□ -3.23
LINC00648-203ENST00000556923 PMCHL2Q9BQD1 86 aa-5.1□□□□□ -3.23
LINC00648-203ENST00000556923 MROH2AA6NES4 1674 aa-5.11□□□□□ -3.23
LINC00648-203ENST00000556923 ANKARQ7Z5J8 1434 aa-5.11□□□□□ -3.23
LINC00648-203ENST00000556923 DLEU1O43261 78 aa-5.11□□□□□ -3.23
LINC00648-203ENST00000556923 TIAM1Q13009 1591 aa-5.12□□□□□ -3.23
LINC00648-203ENST00000556923 DEFB131AP59861 70 aa-5.12□□□□□ -3.23
LINC00648-203ENST00000556923 ALS2Q96Q42 1657 aa-5.13□□□□□ -3.23
LINC00648-203ENST00000556923 A0A096LNI7 61 aa-5.14□□□□□ -3.23
LINC00648-203ENST00000556923 UQCRHLA0A096LP55 91 aa-5.14□□□□□ -3.23
LINC00648-203ENST00000556923 GTF2H5Q6ZYL4 71 aa-5.14□□□□□ -3.23
LINC00648-203ENST00000556923 SARNPP82979 210 aaKnown RBP-5.15□□□□□ -3.23
LINC00648-203ENST00000556923 MYMXA0A1B0GTQ4 84 aa-5.16□□□□□ -3.24
LINC00648-203ENST00000556923 HMGN1P05114 100 aa-5.16□□□□□ -3.24
LINC00648-203ENST00000556923 A0A1B0GV90 55 aa-5.17□□□□□ -3.24
LINC00648-203ENST00000556923 PEA15Q15121 130 aa-5.19□□□□□ -3.24
LINC00648-203ENST00000556923 NMES1Q9C002 83 aa-5.19□□□□□ -3.24
LINC00648-203ENST00000556923 NFAT5O94916 1531 aa-5.19□□□□□ -3.24
LINC00648-203ENST00000556923 MADDQ8WXG6 1647 aa-5.21□□□□□ -3.24
LINC00648-203ENST00000556923 CEBPZOSA8MTT3 80 aa-5.21□□□□□ -3.24
LINC00648-203ENST00000556923 ENHOQ6UWT2 76 aa-5.21□□□□□ -3.24
LINC00648-203ENST00000556923 TMEM203Q969S6 136 aa-5.21□□□□□ -3.24
LINC00648-203ENST00000556923 MYO3AQ8NEV4 1616 aa-5.23□□□□□ -3.25
LINC00648-203ENST00000556923 COL5A1-AS1Q5SY13 56 aa-5.23□□□□□ -3.25
LINC00648-203ENST00000556923 LINC00308Q8TCZ7 52 aa-5.24□□□□□ -3.25
LINC00648-203ENST00000556923 GNG8Q9UK08 70 aa-5.24□□□□□ -3.25
LINC00648-203ENST00000556923 DEFB114Q30KQ6 69 aa-5.25□□□□□ -3.25
LINC00648-203ENST00000556923 FAUP35544 74 aaKnown RBP-5.26□□□□□ -3.25
LINC00648-203ENST00000556923 SMIM11AP58511 58 aa-5.27□□□□□ -3.25
LINC00648-203ENST00000556923 SMIM2Q9BVW6 85 aa-5.27□□□□□ -3.25
LINC00648-203ENST00000556923 PVALEFA0A1B0GWK0 134 aa-5.3□□□□□ -3.26
LINC00648-203ENST00000556923 DUOX2Q9NRD8 1548 aa-5.3□□□□□ -3.26
LINC00648-203ENST00000556923 H3BUT2 72 aa-5.31□□□□□ -3.26
LINC00648-203ENST00000556923 TMEM167BQ9NRX6 74 aa-5.31□□□□□ -3.26
LINC00648-203ENST00000556923 GYPAP02724 150 aa-5.33□□□□□ -3.26
LINC00648-203ENST00000556923 LINC01556Q5JQF7 62 aa-5.33□□□□□ -3.26
LINC00648-203ENST00000556923 EFCAB6Q5THR3 1501 aa-5.33□□□□□ -3.26
LINC00648-203ENST00000556923 KDM5DQ9BY66 1539 aa-5.33□□□□□ -3.26
LINC00648-203ENST00000556923 DEFB124Q8NES8 71 aa-5.34□□□□□ -3.26
LINC00648-203ENST00000556923 DDX60Q8IY21 1712 aaKnown RBP-5.35□□□□□ -3.27
LINC00648-203ENST00000556923 A0A087WXM4 84 aa-5.36□□□□□ -3.27
LINC00648-203ENST00000556923 ATP5EP2Q5VTU8 51 aa-5.38□□□□□ -3.27
LINC00648-203ENST00000556923 SMIM13P0DJ93 91 aa-5.39□□□□□ -3.27
LINC00648-203ENST00000556923 LINC01590Q5TEZ4 76 aa-5.39□□□□□ -3.27
LINC00648-203ENST00000556923 LMTK2Q8IWU2 1503 aa-5.41□□□□□ -3.28
LINC00648-203ENST00000556923 CEP162Q5TB80 1403 aa-5.41□□□□□ -3.28
LINC00648-203ENST00000556923 EFCAB10A6NFE3 127 aa-5.42□□□□□ -3.28
LINC00648-203ENST00000556923 LINC00643Q86TS7 51 aa-5.42□□□□□ -3.28
LINC00648-203ENST00000556923 PEG3Q9GZU2 1588 aa-5.43□□□□□ -3.28
LINC00648-203ENST00000556923 SYCP2Q9BX26 1530 aa-5.43□□□□□ -3.28
LINC00648-203ENST00000556923 RB1CC1Q8TDY2 1594 aa-5.45□□□□□ -3.28
LINC00648-203ENST00000556923 SNHG12Q9BXW3 62 aa-5.45□□□□□ -3.28
LINC00648-203ENST00000556923 SNRPFP62306 86 aaKnown RBP-5.48□□□□□ -3.29
LINC00648-203ENST00000556923 K7EMI3 77 aa-5.51□□□□□ -3.29
LINC00648-203ENST00000556923 TOMM7Q9P0U1 55 aa-5.51□□□□□ -3.29
LINC00648-203ENST00000556923 M0R1W7 72 aa-5.54□□□□□ -3.3
LINC00648-203ENST00000556923 S100A10P60903 97 aa-5.54□□□□□ -3.3
LINC00648-203ENST00000556923 TFF3Q07654 80 aa-5.54□□□□□ -3.3
LINC00648-203ENST00000556923 LINC00587B1AMM8 73 aa-5.56□□□□□ -3.3
LINC00648-203ENST00000556923 DEFB121Q5J5C9 76 aa-5.59□□□□□ -3.3
LINC00648-203ENST00000556923 TCEAL7Q9BRU2 100 aa-5.59□□□□□ -3.3
LINC00648-203ENST00000556923 AGLP35573 1532 aa-5.59□□□□□ -3.3
LINC00648-203ENST00000556923 ABCC1P33527 1531 aa-5.6□□□□□ -3.31
LINC00648-203ENST00000556923 ADCY10Q96PN6 1610 aa-5.6□□□□□ -3.31
LINC00648-203ENST00000556923 H3BVH4 76 aa-5.63□□□□□ -3.31
LINC00648-203ENST00000556923 ABCC3O15438 1527 aa-5.64□□□□□ -3.31
LINC00648-203ENST00000556923 CLTCL1P53675 1640 aa-5.64□□□□□ -3.31
LINC00648-203ENST00000556923 ABCA8O94911 1581 aa-5.65□□□□□ -3.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms