RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 HIVEP1P15822 2718 aa0.92□□□□□ -2.26
FCF1-208ENST00000556814 ABCA2Q9BZC7 2435 aa0.92□□□□□ -2.26
FCF1-208ENST00000556814 NBPF19A0A087WUL8 3843 aa0.92□□□□□ -2.26
FCF1-208ENST00000556814 A0A096LNI7 61 aa0.92□□□□□ -2.26
FCF1-208ENST00000556814 SPINK6Q6UWN8 80 aa0.92□□□□□ -2.26
FCF1-208ENST00000556814 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
FCF1-208ENST00000556814 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
FCF1-208ENST00000556814 HTN3P15516 51 aa0.91□□□□□ -2.26
FCF1-208ENST00000556814 RPS29P62273 56 aaKnown RBP0.91□□□□□ -2.26
FCF1-208ENST00000556814 Q5VSD8 79 aa0.91□□□□□ -2.26
FCF1-208ENST00000556814 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
FCF1-208ENST00000556814 HIVEP3Q5T1R4 2406 aa0.91□□□□□ -2.26
FCF1-208ENST00000556814 NSD1Q96L73 2696 aaPredicted RBP0.91□□□□□ -2.26
FCF1-208ENST00000556814 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.9□□□□□ -2.26
FCF1-208ENST00000556814 PCNX1Q96RV3 2341 aa0.9□□□□□ -2.26
FCF1-208ENST00000556814 SETD2Q9BYW2 2564 aaPredicted RBP0.9□□□□□ -2.27
FCF1-208ENST00000556814 ITPR3Q14573 2671 aa0.9□□□□□ -2.27
FCF1-208ENST00000556814 CREBBPQ92793 2442 aa0.9□□□□□ -2.27
FCF1-208ENST00000556814 MAP1AP78559 2803 aaPredicted RBP0.9□□□□□ -2.27
FCF1-208ENST00000556814 MXRA5Q9NR99 2828 aa0.9□□□□□ -2.27
FCF1-208ENST00000556814 POLQO75417 2590 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 A0A0D9SG42 100 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 DEFB135Q30KP9 77 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 CUBNO60494 3623 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 VPS13CQ709C8 3753 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 NBASA2RRP1 2371 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 F8P00451 2351 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 PKDREJQ9NTG1 2253 aa0.89□□□□□ -2.27
FCF1-208ENST00000556814 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
FCF1-208ENST00000556814 ZANQ9Y493 2812 aa0.88□□□□□ -2.27
FCF1-208ENST00000556814 MTORP42345 2549 aa0.88□□□□□ -2.27
FCF1-208ENST00000556814 ANKHD1Q8IWZ3 2542 aaKnown RBP0.88□□□□□ -2.27
FCF1-208ENST00000556814 SPG11Q96JI7 2443 aa0.88□□□□□ -2.27
FCF1-208ENST00000556814 AKAP6Q13023 2319 aa0.88□□□□□ -2.27
FCF1-208ENST00000556814 ANK2Q01484 3957 aa0.87□□□□□ -2.27
FCF1-208ENST00000556814 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
FCF1-208ENST00000556814 JMJD1CQ15652 2540 aa0.87□□□□□ -2.27
FCF1-208ENST00000556814 COL6A5A8TX70 2615 aa0.86□□□□□ -2.27
FCF1-208ENST00000556814 STAB1Q9NY15 2570 aa0.86□□□□□ -2.27
FCF1-208ENST00000556814 DEFB4AO15263 64 aa0.86□□□□□ -2.27
FCF1-208ENST00000556814 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
FCF1-208ENST00000556814 ATRQ13535 2644 aa0.85□□□□□ -2.27
FCF1-208ENST00000556814 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
FCF1-208ENST00000556814 FLNAP21333 2647 aaKnown RBP0.85□□□□□ -2.27
FCF1-208ENST00000556814 CCDC168Q8NDH2 2452 aa0.84□□□□□ -2.27
FCF1-208ENST00000556814 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.27
FCF1-208ENST00000556814 NOTCH1P46531 2555 aa0.84□□□□□ -2.27
FCF1-208ENST00000556814 SVEP1Q4LDE5 3571 aa0.84□□□□□ -2.27
FCF1-208ENST00000556814 NBEAL1Q6ZS30 2694 aa0.84□□□□□ -2.28
FCF1-208ENST00000556814 COL7A1Q02388 2944 aa0.84□□□□□ -2.28
FCF1-208ENST00000556814 ACANP16112 2415 aa0.84□□□□□ -2.28
FCF1-208ENST00000556814 TGP01266 2768 aa0.83□□□□□ -2.28
FCF1-208ENST00000556814 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
FCF1-208ENST00000556814 TNP1P09430 55 aa0.83□□□□□ -2.28
FCF1-208ENST00000556814 TRRAPQ9Y4A5 3859 aa0.83□□□□□ -2.28
FCF1-208ENST00000556814 KMT2CQ8NEZ4 4911 aaKnown RBP0.82□□□□□ -2.28
FCF1-208ENST00000556814 VWFP04275 2813 aa0.82□□□□□ -2.28
FCF1-208ENST00000556814 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
FCF1-208ENST00000556814 PRKDCP78527 4128 aaKnown RBP0.82□□□□□ -2.28
FCF1-208ENST00000556814 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
FCF1-208ENST00000556814 MGAM2Q2M2H8 2515 aa0.81□□□□□ -2.28
FCF1-208ENST00000556814 TLN2Q9Y4G6 2542 aa0.81□□□□□ -2.28
FCF1-208ENST00000556814 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
FCF1-208ENST00000556814 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
FCF1-208ENST00000556814 NBEAL2Q6ZNJ1 2754 aa0.79□□□□□ -2.28
FCF1-208ENST00000556814 DNAH1Q9P2D7 4330 aa0.78□□□□□ -2.28
FCF1-208ENST00000556814 RYR3Q15413 4870 aa0.78□□□□□ -2.28
FCF1-208ENST00000556814 TENM2Q9NT68 2774 aa0.78□□□□□ -2.28
FCF1-208ENST00000556814 SMR3AQ99954 134 aa0.78□□□□□ -2.28
FCF1-208ENST00000556814 CMYA5Q8N3K9 4069 aa0.77□□□□□ -2.29
FCF1-208ENST00000556814 DNAH3Q8TD57 4116 aa0.77□□□□□ -2.29
FCF1-208ENST00000556814 LYSTQ99698 3801 aa0.77□□□□□ -2.29
FCF1-208ENST00000556814 SACSQ9NZJ4 4579 aa0.77□□□□□ -2.29
FCF1-208ENST00000556814 FRAS1Q86XX4 4008 aa0.76□□□□□ -2.29
FCF1-208ENST00000556814 CSMD3Q7Z407 3707 aa0.75□□□□□ -2.29
FCF1-208ENST00000556814 DNAH7Q8WXX0 4024 aa0.75□□□□□ -2.29
FCF1-208ENST00000556814 PCLOQ9Y6V0 5065 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 DNAH9Q9NYC9 4486 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 STAB2Q8WWQ8 2551 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 BIRC6Q9NR09 4857 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 RYR1P21817 5038 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 DNAH8Q96JB1 4490 aa0.74□□□□□ -2.29
FCF1-208ENST00000556814 HERC2O95714 4834 aa0.73□□□□□ -2.29
FCF1-208ENST00000556814 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
FCF1-208ENST00000556814 DMBT1Q9UGM3 2413 aaPredicted RBP0.73□□□□□ -2.29
FCF1-208ENST00000556814 RYR2Q92736 4967 aa0.73□□□□□ -2.29
FCF1-208ENST00000556814 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
FCF1-208ENST00000556814 PKHD1P08F94 4074 aa0.73□□□□□ -2.29
FCF1-208ENST00000556814 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
FCF1-208ENST00000556814 EPPK1P58107 5090 aaKnown RBP0.73□□□□□ -2.29
FCF1-208ENST00000556814 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
FCF1-208ENST00000556814 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
FCF1-208ENST00000556814 DNAH6Q9C0G6 4158 aa0.72□□□□□ -2.29
FCF1-208ENST00000556814 DNAH10Q8IVF4 4471 aa0.71□□□□□ -2.3
FCF1-208ENST00000556814 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
FCF1-208ENST00000556814 DNAH17Q9UFH2 4485 aa0.71□□□□□ -2.3
FCF1-208ENST00000556814 HYDINQ4G0P3 5121 aa0.71□□□□□ -2.3
FCF1-208ENST00000556814 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms