RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 DNAH3Q8TD57 4116 aa4.74□□□□□ -1.65
SPTB-208ENST00000556626 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SPTB-208ENST00000556626 ANK2Q01484 3957 aa4.73□□□□□ -1.65
SPTB-208ENST00000556626 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
SPTB-208ENST00000556626 KMT2AQ03164 3969 aa4.68□□□□□ -1.66
SPTB-208ENST00000556626 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
SPTB-208ENST00000556626 ANK3Q12955 4377 aaKnown RBP4.68□□□□□ -1.66
SPTB-208ENST00000556626 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
SPTB-208ENST00000556626 DNAH2Q9P225 4427 aa4.66□□□□□ -1.66
SPTB-208ENST00000556626 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
SPTB-208ENST00000556626 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
SPTB-208ENST00000556626 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
SPTB-208ENST00000556626 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
SPTB-208ENST00000556626 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
SPTB-208ENST00000556626 LORP23490 312 aaPredicted RBP4.41□□□□□ -1.7
SPTB-208ENST00000556626 DNAH1Q9P2D7 4330 aa4.39□□□□□ -1.71
SPTB-208ENST00000556626 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
SPTB-208ENST00000556626 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
SPTB-208ENST00000556626 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
SPTB-208ENST00000556626 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
SPTB-208ENST00000556626 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
SPTB-208ENST00000556626 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
SPTB-208ENST00000556626 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
SPTB-208ENST00000556626 DNAH9Q9NYC9 4486 aa4.14□□□□□ -1.75
SPTB-208ENST00000556626 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
SPTB-208ENST00000556626 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
SPTB-208ENST00000556626 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
SPTB-208ENST00000556626 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
SPTB-208ENST00000556626 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
SPTB-208ENST00000556626 DNAH17Q9UFH2 4485 aa4.07□□□□□ -1.76
SPTB-208ENST00000556626 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
SPTB-208ENST00000556626 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
SPTB-208ENST00000556626 STARD9Q9P2P6 4700 aa4.05□□□□□ -1.76
SPTB-208ENST00000556626 MT1HP80294 61 aa4.04□□□□□ -1.76
SPTB-208ENST00000556626 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
SPTB-208ENST00000556626 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
SPTB-208ENST00000556626 KRTAP4-1Q9BYQ7 146 aa4.01□□□□□ -1.77
SPTB-208ENST00000556626 MT2AP02795 61 aa3.98□□□□□ -1.77
SPTB-208ENST00000556626 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
SPTB-208ENST00000556626 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
SPTB-208ENST00000556626 PLECQ15149 4684 aaKnown RBP3.96□□□□□ -1.78
SPTB-208ENST00000556626 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
SPTB-208ENST00000556626 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
SPTB-208ENST00000556626 MT1FP04733 61 aa3.9□□□□□ -1.79
SPTB-208ENST00000556626 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
SPTB-208ENST00000556626 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
SPTB-208ENST00000556626 PKD1P98161 4303 aa3.8□□□□□ -1.8
SPTB-208ENST00000556626 MT3P25713 68 aa3.74□□□□□ -1.81
SPTB-208ENST00000556626 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
SPTB-208ENST00000556626 LRP1BQ9NZR2 4599 aa3.72□□□□□ -1.81
SPTB-208ENST00000556626 MT1XP80297 61 aa3.72□□□□□ -1.81
SPTB-208ENST00000556626 KRTAP19-1Q8IUB9 90 aa3.71□□□□□ -1.82
SPTB-208ENST00000556626 MT1GP13640 62 aa3.71□□□□□ -1.82
SPTB-208ENST00000556626 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
SPTB-208ENST00000556626 SPRR2EP22531 72 aa3.67□□□□□ -1.82
SPTB-208ENST00000556626 SPRR2BP35325 72 aa3.67□□□□□ -1.82
SPTB-208ENST00000556626 SPRR2AP35326 72 aa3.67□□□□□ -1.82
SPTB-208ENST00000556626 APOBP04114 4563 aaKnown RBP3.66□□□□□ -1.82
SPTB-208ENST00000556626 TNXBP22105 4242 aa3.65□□□□□ -1.83
SPTB-208ENST00000556626 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SPTB-208ENST00000556626 LCE2BO14633 110 aa3.62□□□□□ -1.83
SPTB-208ENST00000556626 FAT1Q14517 4588 aa3.61□□□□□ -1.83
SPTB-208ENST00000556626 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
SPTB-208ENST00000556626 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
SPTB-208ENST00000556626 SPRR2DP22532 72 aa3.56□□□□□ -1.84
SPTB-208ENST00000556626 LRP1Q07954 4544 aaKnown RBP3.55□□□□□ -1.84
SPTB-208ENST00000556626 DYNC1H1Q14204 4646 aaKnown RBP3.54□□□□□ -1.84
SPTB-208ENST00000556626 HSPG2P98160 4391 aa3.54□□□□□ -1.84
SPTB-208ENST00000556626 MT1BP07438 61 aa3.51□□□□□ -1.85
SPTB-208ENST00000556626 SACSQ9NZJ4 4579 aa3.51□□□□□ -1.85
SPTB-208ENST00000556626 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
SPTB-208ENST00000556626 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
SPTB-208ENST00000556626 MT1LQ93083 61 aa3.48□□□□□ -1.85
SPTB-208ENST00000556626 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
SPTB-208ENST00000556626 PRM1P04553 51 aa3.45□□□□□ -1.86
SPTB-208ENST00000556626 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
SPTB-208ENST00000556626 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
SPTB-208ENST00000556626 LPAP08519 4548 aa3.37□□□□□ -1.87
SPTB-208ENST00000556626 MT1EP04732 61 aa3.34□□□□□ -1.87
SPTB-208ENST00000556626 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SPTB-208ENST00000556626 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
SPTB-208ENST00000556626 LRP2P98164 4655 aa3.29□□□□□ -1.88
SPTB-208ENST00000556626 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
SPTB-208ENST00000556626 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
SPTB-208ENST00000556626 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
SPTB-208ENST00000556626 MT1MQ8N339 61 aa3.24□□□□□ -1.89
SPTB-208ENST00000556626 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
SPTB-208ENST00000556626 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
SPTB-208ENST00000556626 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
SPTB-208ENST00000556626 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
SPTB-208ENST00000556626 RYR1P21817 5038 aa3.19□□□□□ -1.9
SPTB-208ENST00000556626 DNHD1Q96M86 4753 aa3.18□□□□□ -1.9
SPTB-208ENST00000556626 MT4P47944 62 aa3.16□□□□□ -1.9
SPTB-208ENST00000556626 LCE1DQ5T752 114 aa3.15□□□□□ -1.9
SPTB-208ENST00000556626 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SPTB-208ENST00000556626 RYR3Q15413 4870 aa3.11□□□□□ -1.91
SPTB-208ENST00000556626 MT1AP04731 61 aa3.08□□□□□ -1.92
SPTB-208ENST00000556626 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SPTB-208ENST00000556626 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
SPTB-208ENST00000556626 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms