RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 A6NED7 52 aa2.22□□□□□ -2.05
TGFB3-205ENST00000556507 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
TGFB3-205ENST00000556507 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
TGFB3-205ENST00000556507 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
TGFB3-205ENST00000556507 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
TGFB3-205ENST00000556507 FBN3Q75N90 2809 aa2.21□□□□□ -2.06
TGFB3-205ENST00000556507 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
TGFB3-205ENST00000556507 LYSTQ99698 3801 aa2.21□□□□□ -2.06
TGFB3-205ENST00000556507 RETNLBQ9BQ08 111 aa2.21□□□□□ -2.06
TGFB3-205ENST00000556507 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
TGFB3-205ENST00000556507 CDC42SE1Q9NRR8 79 aa2.2□□□□□ -2.06
TGFB3-205ENST00000556507 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
TGFB3-205ENST00000556507 MGAM2Q2M2H8 2515 aa2.19□□□□□ -2.06
TGFB3-205ENST00000556507 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
TGFB3-205ENST00000556507 STAB2Q8WWQ8 2551 aa2.18□□□□□ -2.06
TGFB3-205ENST00000556507 SMR3BP02814 79 aaPredicted RBP2.18□□□□□ -2.06
TGFB3-205ENST00000556507 C7orf65Q6ZTY9 151 aa2.18□□□□□ -2.06
TGFB3-205ENST00000556507 ADM2Q7Z4H4 148 aa2.18□□□□□ -2.06
TGFB3-205ENST00000556507 HECTD4Q9Y4D8 3996 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 A0A1B0GU69 56 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 A8MUU9 505 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 K7ERS5 55 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 SPINK7P58062 85 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 KRTAP10-4P60372 401 aaPredicted RBP2.17□□□□□ -2.06
TGFB3-205ENST00000556507 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
TGFB3-205ENST00000556507 DNAH11Q96DT5 4516 aa2.16□□□□□ -2.06
TGFB3-205ENST00000556507 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
TGFB3-205ENST00000556507 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
TGFB3-205ENST00000556507 PKD1P98161 4303 aa2.16□□□□□ -2.06
TGFB3-205ENST00000556507 KMT2AQ03164 3969 aa2.15□□□□□ -2.06
TGFB3-205ENST00000556507 SPATA8Q6RVD6 105 aa2.15□□□□□ -2.07
TGFB3-205ENST00000556507 A6NN06 94 aa2.14□□□□□ -2.07
TGFB3-205ENST00000556507 UQCR11O14957 56 aa2.14□□□□□ -2.07
TGFB3-205ENST00000556507 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
TGFB3-205ENST00000556507 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
TGFB3-205ENST00000556507 KRTAP10-8P60410 259 aa2.13□□□□□ -2.07
TGFB3-205ENST00000556507 FRAS1Q86XX4 4008 aa2.12□□□□□ -2.07
TGFB3-205ENST00000556507 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
TGFB3-205ENST00000556507 TGP01266 2768 aa2.12□□□□□ -2.07
TGFB3-205ENST00000556507 DNAH5Q8TE73 4624 aa2.12□□□□□ -2.07
TGFB3-205ENST00000556507 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
TGFB3-205ENST00000556507 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
TGFB3-205ENST00000556507 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
TGFB3-205ENST00000556507 COX6B2Q6YFQ2 88 aa2.1□□□□□ -2.07
TGFB3-205ENST00000556507 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
TGFB3-205ENST00000556507 Q5VSD8 79 aa2.08□□□□□ -2.08
TGFB3-205ENST00000556507 A0A1B0GU33 70 aa2.07□□□□□ -2.08
TGFB3-205ENST00000556507 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
TGFB3-205ENST00000556507 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
TGFB3-205ENST00000556507 H1FX-AS1Q4G0G2 97 aa2.06□□□□□ -2.08
TGFB3-205ENST00000556507 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
TGFB3-205ENST00000556507 VPS13BQ7Z7G8 4022 aa2.05□□□□□ -2.08
TGFB3-205ENST00000556507 ROMO1P60602 79 aa2.04□□□□□ -2.08
TGFB3-205ENST00000556507 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
TGFB3-205ENST00000556507 H0YAA0 97 aa2.03□□□□□ -2.08
TGFB3-205ENST00000556507 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
TGFB3-205ENST00000556507 S4R3F8 94 aa2.02□□□□□ -2.09
TGFB3-205ENST00000556507 APOBP04114 4563 aaKnown RBP2.01□□□□□ -2.09
TGFB3-205ENST00000556507 PKHD1P08F94 4074 aa2.01□□□□□ -2.09
TGFB3-205ENST00000556507 TPRXLQ17RH7 258 aa2.01□□□□□ -2.09
TGFB3-205ENST00000556507 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
TGFB3-205ENST00000556507 CSAG1Q6PB30 78 aa1.98□□□□□ -2.09
TGFB3-205ENST00000556507 FAT1Q14517 4588 aa1.98□□□□□ -2.09
TGFB3-205ENST00000556507 FAT3Q8TDW7 4589 aa1.97□□□□□ -2.09
TGFB3-205ENST00000556507 FLG2Q5D862 2391 aaPredicted RBP1.97□□□□□ -2.09
TGFB3-205ENST00000556507 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
TGFB3-205ENST00000556507 M0QZ58 72 aa1.95□□□□□ -2.1
TGFB3-205ENST00000556507 P0C880 135 aa1.95□□□□□ -2.1
TGFB3-205ENST00000556507 KRTAP25-1Q3LHN0 102 aa1.95□□□□□ -2.1
TGFB3-205ENST00000556507 HSPG2P98160 4391 aa1.94□□□□□ -2.1
TGFB3-205ENST00000556507 TNXBP22105 4242 aa1.93□□□□□ -2.1
TGFB3-205ENST00000556507 A0A0D9SG42 100 aa1.93□□□□□ -2.1
TGFB3-205ENST00000556507 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
TGFB3-205ENST00000556507 RYR2Q92736 4967 aa1.92□□□□□ -2.1
TGFB3-205ENST00000556507 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
TGFB3-205ENST00000556507 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
TGFB3-205ENST00000556507 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
TGFB3-205ENST00000556507 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
TGFB3-205ENST00000556507 R4GN34 69 aa1.89□□□□□ -2.11
TGFB3-205ENST00000556507 CRIPTQ9P021 101 aa1.88□□□□□ -2.11
TGFB3-205ENST00000556507 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
TGFB3-205ENST00000556507 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
TGFB3-205ENST00000556507 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
TGFB3-205ENST00000556507 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
TGFB3-205ENST00000556507 RYR1P21817 5038 aa1.86□□□□□ -2.11
TGFB3-205ENST00000556507 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
TGFB3-205ENST00000556507 MYCBP2O75592 4640 aa1.85□□□□□ -2.11
TGFB3-205ENST00000556507 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
TGFB3-205ENST00000556507 KRTAP19-2Q3LHN2 52 aa1.83□□□□□ -2.12
TGFB3-205ENST00000556507 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
TGFB3-205ENST00000556507 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
TGFB3-205ENST00000556507 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
TGFB3-205ENST00000556507 RYR3Q15413 4870 aa1.81□□□□□ -2.12
TGFB3-205ENST00000556507 KIAA1109Q2LD37 5005 aa1.81□□□□□ -2.12
TGFB3-205ENST00000556507 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
TGFB3-205ENST00000556507 LRP2P98164 4655 aa1.79□□□□□ -2.12
TGFB3-205ENST00000556507 LPAP08519 4548 aa1.79□□□□□ -2.12
TGFB3-205ENST00000556507 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms