RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 RPS29P62273 56 aaKnown RBP-0.22□□□□□ -2.44
CDKN3-210ENST00000556305 DEFB107AQ8IZN7 70 aa-0.22□□□□□ -2.44
CDKN3-210ENST00000556305 TRGV9Q99603 122 aa-0.22□□□□□ -2.44
CDKN3-210ENST00000556305 CRIPTQ9P021 101 aa-0.22□□□□□ -2.44
CDKN3-210ENST00000556305 CPSF4LA6NMK7 179 aaKnown RBP-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 H7BZZ5 65 aa-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 MT-ATP8P03928 68 aa-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 KLK9Q2XQG4 91 aa-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 DEFB110Q30KQ9 67 aa-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 ACBD7Q8N6N7 88 aa-0.23□□□□□ -2.45
CDKN3-210ENST00000556305 SERP2Q8N6R1 65 aa-0.24□□□□□ -2.45
CDKN3-210ENST00000556305 TTTY10Q9BZA0 68 aa-0.24□□□□□ -2.45
CDKN3-210ENST00000556305 I3L3M4 83 aa-0.25□□□□□ -2.45
CDKN3-210ENST00000556305 HTN3P15516 51 aa-0.25□□□□□ -2.45
CDKN3-210ENST00000556305 DPY30Q9C005 99 aa-0.25□□□□□ -2.45
CDKN3-210ENST00000556305 ARMS2P0C7Q2 107 aa-0.26□□□□□ -2.45
CDKN3-210ENST00000556305 COL5A1-AS1Q5SY13 56 aa-0.27□□□□□ -2.45
CDKN3-210ENST00000556305 COX14Q96I36 57 aa-0.27□□□□□ -2.45
CDKN3-210ENST00000556305 UQCRHLA0A096LP55 91 aa-0.28□□□□□ -2.45
CDKN3-210ENST00000556305 HMGN3Q15651 99 aa-0.28□□□□□ -2.45
CDKN3-210ENST00000556305 ZNF720Q7Z2F6 126 aa-0.28□□□□□ -2.45
CDKN3-210ENST00000556305 FAUP35544 74 aaKnown RBP-0.29□□□□□ -2.46
CDKN3-210ENST00000556305 KRTAP19-5Q3LI72 72 aa-0.29□□□□□ -2.46
CDKN3-210ENST00000556305 ETDBQ3ZM63 59 aa-0.29□□□□□ -2.46
CDKN3-210ENST00000556305 ALKAL2Q6UX46 152 aa-0.3□□□□□ -2.46
CDKN3-210ENST00000556305 M0R143 59 aa-0.31□□□□□ -2.46
CDKN3-210ENST00000556305 TDRG1Q3Y452 100 aa-0.31□□□□□ -2.46
CDKN3-210ENST00000556305 TRBV7-7A0A0K0K1E9 115 aa-0.32□□□□□ -2.46
CDKN3-210ENST00000556305 D6R8Y8 96 aa-0.32□□□□□ -2.46
CDKN3-210ENST00000556305 MUSTN1Q8IVN3 82 aa-0.32□□□□□ -2.46
CDKN3-210ENST00000556305 CCL22O00626 93 aa-0.33□□□□□ -2.46
CDKN3-210ENST00000556305 LEPROTL1O95214 131 aa-0.33□□□□□ -2.46
CDKN3-210ENST00000556305 SPART-AS1P0CW21 52 aa-0.33□□□□□ -2.46
CDKN3-210ENST00000556305 H1FX-AS1Q4G0G2 97 aa-0.33□□□□□ -2.46
CDKN3-210ENST00000556305 UBE2D4Q9Y2X8 147 aa-0.33□□□□□ -2.46
CDKN3-210ENST00000556305 C9orf92A6NGG3 77 aa-0.34□□□□□ -2.46
CDKN3-210ENST00000556305 F8WEM9 126 aa-0.34□□□□□ -2.46
CDKN3-210ENST00000556305 DEFB114Q30KQ6 69 aa-0.34□□□□□ -2.46
CDKN3-210ENST00000556305 MRPL34Q9BQ48 92 aaKnown RBP-0.34□□□□□ -2.46
CDKN3-210ENST00000556305 PSENENQ9NZ42 101 aa-0.34□□□□□ -2.46
CDKN3-210ENST00000556305 S100A8P05109 93 aa-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 IGLC2P0DOY2 106 aa-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 IGLC3P0DOY3 106 aa-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 RPS27LQ71UM5 84 aaKnown RBP-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 WFDC10BQ8IUB3 73 aa-0.37□□□□□ -2.47
CDKN3-210ENST00000556305 SMIM11AP58511 58 aa-0.38□□□□□ -2.47
CDKN3-210ENST00000556305 DEFA5Q01523 94 aa-0.38□□□□□ -2.47
CDKN3-210ENST00000556305 LINC01556Q5JQF7 62 aa-0.39□□□□□ -2.47
CDKN3-210ENST00000556305 A0A096LPF7 62 aa-0.4□□□□□ -2.47
CDKN3-210ENST00000556305 GYPAP02724 150 aa-0.4□□□□□ -2.47
CDKN3-210ENST00000556305 PKIAP61925 76 aa-0.4□□□□□ -2.47
CDKN3-210ENST00000556305 CDKN2A-AS1Q9UH64 79 aa-0.4□□□□□ -2.47
CDKN3-210ENST00000556305 APELAP0DMC3 54 aa-0.41□□□□□ -2.48
CDKN3-210ENST00000556305 C9orf62Q8N4C0 152 aa-0.41□□□□□ -2.48
CDKN3-210ENST00000556305 LEAP2Q969E1 77 aa-0.41□□□□□ -2.48
CDKN3-210ENST00000556305 PEA15Q15121 130 aa-0.42□□□□□ -2.48
CDKN3-210ENST00000556305 SNHG12Q9BXW3 62 aa-0.42□□□□□ -2.48
CDKN3-210ENST00000556305 HIGD1BQ9P298 99 aa-0.42□□□□□ -2.48
CDKN3-210ENST00000556305 HILPDAQ9Y5L2 63 aa-0.42□□□□□ -2.48
CDKN3-210ENST00000556305 H0YGG7 62 aa-0.43□□□□□ -2.48
CDKN3-210ENST00000556305 M0R1W7 72 aa-0.43□□□□□ -2.48
CDKN3-210ENST00000556305 HMGN2P05204 90 aaKnown RBP-0.43□□□□□ -2.48
CDKN3-210ENST00000556305 DEFB130BP0DP73 79 aa-0.44□□□□□ -2.48
CDKN3-210ENST00000556305 DEFB130AP0DP74 79 aa-0.44□□□□□ -2.48
CDKN3-210ENST00000556305 PLGLAQ15195 96 aa-0.44□□□□□ -2.48
CDKN3-210ENST00000556305 H3BNG1 76 aa-0.45□□□□□ -2.48
CDKN3-210ENST00000556305 COX7BP24311 80 aa-0.45□□□□□ -2.48
CDKN3-210ENST00000556305 RPL38P63173 70 aaKnown RBP-0.45□□□□□ -2.48
CDKN3-210ENST00000556305 NMSQ5H8A3 153 aa-0.45□□□□□ -2.48
CDKN3-210ENST00000556305 A0A096LNI7 61 aa-0.46□□□□□ -2.48
CDKN3-210ENST00000556305 A0A1B0GUT8 65 aa-0.46□□□□□ -2.48
CDKN3-210ENST00000556305 WFDC13Q8IUB5 93 aa-0.46□□□□□ -2.48
CDKN3-210ENST00000556305 C20orf78Q9BR46 151 aa-0.46□□□□□ -2.48
CDKN3-210ENST00000556305 CYB5AP00167 134 aa-0.47□□□□□ -2.48
CDKN3-210ENST00000556305 Q9H521 79 aa-0.48□□□□□ -2.49
CDKN3-210ENST00000556305 IQCF6A8MYZ5 107 aa-0.49□□□□□ -2.49
CDKN3-210ENST00000556305 MINOS1Q5TGZ0 78 aa-0.49□□□□□ -2.49
CDKN3-210ENST00000556305 KAAG1Q9UBP8 84 aa-0.49□□□□□ -2.49
CDKN3-210ENST00000556305 DEFB1P60022 68 aa-0.5□□□□□ -2.49
CDKN3-210ENST00000556305 GAFA1Q96PS6 74 aa-0.5□□□□□ -2.49
CDKN3-210ENST00000556305 MRPL33O75394 65 aaKnown RBP-0.51□□□□□ -2.49
CDKN3-210ENST00000556305 DEFB131AP59861 70 aa-0.52□□□□□ -2.49
CDKN3-210ENST00000556305 PYY3Q5JQD4 70 aa-0.52□□□□□ -2.49
CDKN3-210ENST00000556305 V9GYS6 101 aa-0.53□□□□□ -2.49
CDKN3-210ENST00000556305 MYMXA0A1B0GTQ4 84 aa-0.55□□□□□ -2.5
CDKN3-210ENST00000556305 SNRPFP62306 86 aaKnown RBP-0.55□□□□□ -2.5
CDKN3-210ENST00000556305 S4R3F8 94 aa-0.55□□□□□ -2.5
CDKN3-210ENST00000556305 NDUFA4O00483 81 aa-0.56□□□□□ -2.5
CDKN3-210ENST00000556305 S100A16Q96FQ6 103 aaKnown RBP-0.56□□□□□ -2.5
CDKN3-210ENST00000556305 TRAV21A0A0B4J279 112 aa-0.57□□□□□ -2.5
CDKN3-210ENST00000556305 K7EP34 96 aa-0.57□□□□□ -2.5
CDKN3-210ENST00000556305 NDUFA3O95167 84 aa-0.57□□□□□ -2.5
CDKN3-210ENST00000556305 NOP10Q9NPE3 64 aaKnown RBP-0.57□□□□□ -2.5
CDKN3-210ENST00000556305 PVALEFA0A1B0GWK0 134 aa-0.58□□□□□ -2.5
CDKN3-210ENST00000556305 NDUFB1O75438 58 aa-0.58□□□□□ -2.5
CDKN3-210ENST00000556305 LINC00643Q86TS7 51 aa-0.58□□□□□ -2.5
CDKN3-210ENST00000556305 RABAC1Q9UI14 185 aa-0.59□□□□□ -2.5
CDKN3-210ENST00000556305 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.59□□□□□ -2.5
CDKN3-210ENST00000556305 CEBPZOSA8MTT3 80 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms