RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 MT1MQ8N339 61 aa-1.19□□□□□ -2.6
SCFD1-218ENST00000556256 CRYBG3Q68DQ2 2970 aa-1.19□□□□□ -2.6
SCFD1-218ENST00000556256 TLN1Q9Y490 2541 aaKnown RBP-1.19□□□□□ -2.6
SCFD1-218ENST00000556256 CFAP54Q96N23 3096 aa-1.19□□□□□ -2.6
SCFD1-218ENST00000556256 MT2AP02795 61 aa-1.2□□□□□ -2.6
SCFD1-218ENST00000556256 ADIRFQ15847 76 aa-1.2□□□□□ -2.6
SCFD1-218ENST00000556256 LMTK2Q8IWU2 1503 aa-1.2□□□□□ -2.6
SCFD1-218ENST00000556256 SMARCA2P51531 1590 aa-1.21□□□□□ -2.6
SCFD1-218ENST00000556256 FREM2Q5SZK8 3169 aa-1.21□□□□□ -2.6
SCFD1-218ENST00000556256 DIP2AQ14689 1571 aa-1.21□□□□□ -2.6
SCFD1-218ENST00000556256 PRUNE2Q8WUY3 3088 aa-1.21□□□□□ -2.6
SCFD1-218ENST00000556256 DCAF1Q9Y4B6 1507 aa-1.22□□□□□ -2.6
SCFD1-218ENST00000556256 C3P01024 1663 aa-1.23□□□□□ -2.61
SCFD1-218ENST00000556256 ABCC6O95255 1503 aa-1.23□□□□□ -2.61
SCFD1-218ENST00000556256 H3BVH4 76 aa-1.23□□□□□ -2.61
SCFD1-218ENST00000556256 M0QY20 66 aa-1.23□□□□□ -2.61
SCFD1-218ENST00000556256 ERVK-7P63135 1459 aa-1.24□□□□□ -2.61
SCFD1-218ENST00000556256 ABCC1P33527 1531 aa-1.24□□□□□ -2.61
SCFD1-218ENST00000556256 CFAP74Q9C0B2 1584 aa-1.24□□□□□ -2.61
SCFD1-218ENST00000556256 M0QZ58 72 aa-1.24□□□□□ -2.61
SCFD1-218ENST00000556256 CLASP1Q7Z460 1538 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 MROH1Q8NDA8 1641 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 LINC01546A6NGU7 62 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 C18orf32Q8TCD1 76 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 S100A13Q99584 98 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 MED14O60244 1454 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 DNMBPQ6XZF7 1577 aa-1.25□□□□□ -2.61
SCFD1-218ENST00000556256 VPS13CQ709C8 3753 aa-1.26□□□□□ -2.61
SCFD1-218ENST00000556256 BOD1L1Q8NFC6 3051 aa-1.26□□□□□ -2.61
SCFD1-218ENST00000556256 MT1BP07438 61 aa-1.27□□□□□ -2.61
SCFD1-218ENST00000556256 DEFB114Q30KQ6 69 aa-1.27□□□□□ -2.61
SCFD1-218ENST00000556256 FAM208AQ9UK61 1670 aaKnown RBP-1.27□□□□□ -2.61
SCFD1-218ENST00000556256 CROCC2H7BZ55 1655 aa-1.28□□□□□ -2.61
SCFD1-218ENST00000556256 ABCA8O94911 1581 aa-1.28□□□□□ -2.61
SCFD1-218ENST00000556256 A8MTW9 85 aa-1.28□□□□□ -2.61
SCFD1-218ENST00000556256 DEFB4AO15263 64 aa-1.28□□□□□ -2.61
SCFD1-218ENST00000556256 SPART-AS1P0CW21 52 aa-1.28□□□□□ -2.61
SCFD1-218ENST00000556256 ANKARQ7Z5J8 1434 aa-1.29□□□□□ -2.62
SCFD1-218ENST00000556256 GNG2P59768 71 aa-1.3□□□□□ -2.62
SCFD1-218ENST00000556256 KAAG1Q9UBP8 84 aa-1.3□□□□□ -2.62
SCFD1-218ENST00000556256 HILPDAQ9Y5L2 63 aa-1.3□□□□□ -2.62
SCFD1-218ENST00000556256 MADDQ8WXG6 1647 aa-1.3□□□□□ -2.62
SCFD1-218ENST00000556256 GLI2P10070 1586 aa-1.3□□□□□ -2.62
SCFD1-218ENST00000556256 ATXN8Q156A1 80 aa-1.31□□□□□ -2.62
SCFD1-218ENST00000556256 TIAM1Q13009 1591 aa-1.31□□□□□ -2.62
SCFD1-218ENST00000556256 IQGAP3Q86VI3 1631 aa-1.33□□□□□ -2.62
SCFD1-218ENST00000556256 ABCA9Q8IUA7 1624 aa-1.33□□□□□ -2.62
SCFD1-218ENST00000556256 FRYLO94915 3013 aa-1.33□□□□□ -2.62
SCFD1-218ENST00000556256 CCDC18Q5T9S5 1454 aa-1.34□□□□□ -2.62
SCFD1-218ENST00000556256 ABRACLQ9P1F3 81 aa-1.34□□□□□ -2.62
SCFD1-218ENST00000556256 PREX2Q70Z35 1606 aa-1.34□□□□□ -2.62
SCFD1-218ENST00000556256 ALS2Q96Q42 1657 aa-1.35□□□□□ -2.63
SCFD1-218ENST00000556256 KIF21BO75037 1637 aa-1.35□□□□□ -2.63
SCFD1-218ENST00000556256 RRBP1Q9P2E9 1410 aaKnown RBP-1.35□□□□□ -2.63
SCFD1-218ENST00000556256 RB1CC1Q8TDY2 1594 aa-1.35□□□□□ -2.63
SCFD1-218ENST00000556256 WDFY3Q8IZQ1 3526 aa-1.36□□□□□ -2.63
SCFD1-218ENST00000556256 GNG13Q9P2W3 67 aa-1.36□□□□□ -2.63
SCFD1-218ENST00000556256 PCNTO95613 3336 aa-1.37□□□□□ -2.63
SCFD1-218ENST00000556256 LINC01549A6NIU2 74 aa-1.37□□□□□ -2.63
SCFD1-218ENST00000556256 LINC00308Q8TCZ7 52 aa-1.37□□□□□ -2.63
SCFD1-218ENST00000556256 SMIM27A0A1W2PRY6 76 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 K7EMI3 77 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 M0R1W7 72 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 WFDC10BQ8IUB3 73 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 LEAP2Q969E1 77 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 CEP350Q5VT06 3117 aa-1.38□□□□□ -2.63
SCFD1-218ENST00000556256 SPEGQ15772 3267 aa-1.39□□□□□ -2.63
SCFD1-218ENST00000556256 UGGT2Q9NYU1 1516 aa-1.4□□□□□ -2.63
SCFD1-218ENST00000556256 TMEM167BQ9NRX6 74 aa-1.41□□□□□ -2.64
SCFD1-218ENST00000556256 EFCAB6Q5THR3 1501 aa-1.42□□□□□ -2.64
SCFD1-218ENST00000556256 DMDP11532 3685 aa-1.42□□□□□ -2.64
SCFD1-218ENST00000556256 EEA1Q15075 1411 aa-1.42□□□□□ -2.64
SCFD1-218ENST00000556256 ABCA6Q8N139 1617 aa-1.43□□□□□ -2.64
SCFD1-218ENST00000556256 DUOX2Q9NRD8 1548 aa-1.43□□□□□ -2.64
SCFD1-218ENST00000556256 POLR2KP53803 58 aaKnown RBP-1.43□□□□□ -2.64
SCFD1-218ENST00000556256 DEFB136Q30KP8 78 aa-1.43□□□□□ -2.64
SCFD1-218ENST00000556256 CENPEQ02224 2701 aa-1.43□□□□□ -2.64
SCFD1-218ENST00000556256 IGIPA6NJ69 53 aa-1.44□□□□□ -2.64
SCFD1-218ENST00000556256 SZT2Q5T011 3432 aa-1.44□□□□□ -2.64
SCFD1-218ENST00000556256 LMO7Q8WWI1 1683 aa-1.47□□□□□ -2.64
SCFD1-218ENST00000556256 NMES1Q9C002 83 aa-1.47□□□□□ -2.64
SCFD1-218ENST00000556256 RPS29P62273 56 aaKnown RBP-1.48□□□□□ -2.65
SCFD1-218ENST00000556256 MT1FP04733 61 aa-1.49□□□□□ -2.65
SCFD1-218ENST00000556256 SERF2P84101 59 aa-1.49□□□□□ -2.65
SCFD1-218ENST00000556256 CEP250Q9BV73 2442 aa-1.49□□□□□ -2.65
SCFD1-218ENST00000556256 SMCO4Q9NRQ5 59 aa-1.5□□□□□ -2.65
SCFD1-218ENST00000556256 WDFY4Q6ZS81 3184 aa-1.5□□□□□ -2.65
SCFD1-218ENST00000556256 PDCD5O14737 125 aa-1.51□□□□□ -2.65
SCFD1-218ENST00000556256 DEFB131AP59861 70 aa-1.51□□□□□ -2.65
SCFD1-218ENST00000556256 TFF3Q07654 80 aa-1.52□□□□□ -2.65
SCFD1-218ENST00000556256 SYCP2Q9BX26 1530 aa-1.52□□□□□ -2.65
SCFD1-218ENST00000556256 UGGT1Q9NYU2 1555 aa-1.52□□□□□ -2.65
SCFD1-218ENST00000556256 MROH2AA6NES4 1674 aa-1.52□□□□□ -2.65
SCFD1-218ENST00000556256 LOC400499M0QZD8 3231 aa-1.53□□□□□ -2.65
SCFD1-218ENST00000556256 H0YGX0 51 aa-1.53□□□□□ -2.65
SCFD1-218ENST00000556256 CCDC180Q9P1Z9 1646 aa-1.55□□□□□ -2.66
SCFD1-218ENST00000556256 DCHS1Q96JQ0 3298 aa-1.56□□□□□ -2.66
SCFD1-218ENST00000556256 EFCAB5A4FU69 1503 aa-1.56□□□□□ -2.66
SCFD1-218ENST00000556256 AGLP35573 1532 aa-1.56□□□□□ -2.66
SCFD1-218ENST00000556256 MUC3AQ02505 3323 aa-1.56□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms