RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SMR3BP02814 79 aaPredicted RBP-0.01□□□□□ -2.41
SRP54-204ENST00000553923 KRTAP19-8Q3LI54 63 aa-0.01□□□□□ -2.41
SRP54-204ENST00000553923 KRTAP6-1Q3LI64 71 aa-0.01□□□□□ -2.41
SRP54-204ENST00000553923 LAMA5O15230 3695 aa-0.01□□□□□ -2.41
SRP54-204ENST00000553923 LEAP2Q969E1 77 aa-0.02□□□□□ -2.41
SRP54-204ENST00000553923 RPL39LQ96EH5 51 aaKnown RBP-0.02□□□□□ -2.41
SRP54-204ENST00000553923 FAT1Q14517 4588 aa-0.02□□□□□ -2.41
SRP54-204ENST00000553923 TGP01266 2768 aa-0.02□□□□□ -2.41
SRP54-204ENST00000553923 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
SRP54-204ENST00000553923 LAMA1P25391 3075 aa-0.03□□□□□ -2.41
SRP54-204ENST00000553923 SNRPGP62308 76 aaKnown RBP-0.03□□□□□ -2.41
SRP54-204ENST00000553923 KRTAP19-5Q3LI72 72 aa-0.03□□□□□ -2.41
SRP54-204ENST00000553923 PCLOQ9Y6V0 5065 aa-0.03□□□□□ -2.41
SRP54-204ENST00000553923 NBPF19A0A087WUL8 3843 aa-0.03□□□□□ -2.41
SRP54-204ENST00000553923 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.42
SRP54-204ENST00000553923 FASNP49327 2511 aaKnown RBP-0.04□□□□□ -2.42
SRP54-204ENST00000553923 SPENQ96T58 3664 aaKnown RBP-0.05□□□□□ -2.42
SRP54-204ENST00000553923 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
SRP54-204ENST00000553923 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.05□□□□□ -2.42
SRP54-204ENST00000553923 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
SRP54-204ENST00000553923 DNAH1Q9P2D7 4330 aa-0.05□□□□□ -2.42
SRP54-204ENST00000553923 TEP1Q99973 2627 aaKnown RBP-0.05□□□□□ -2.42
SRP54-204ENST00000553923 COL6A5A8TX70 2615 aa-0.06□□□□□ -2.42
SRP54-204ENST00000553923 HERC1Q15751 4861 aa-0.06□□□□□ -2.42
SRP54-204ENST00000553923 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.06□□□□□ -2.42
SRP54-204ENST00000553923 ACACBO00763 2458 aa-0.07□□□□□ -2.42
SRP54-204ENST00000553923 FRYQ5TBA9 3013 aa-0.07□□□□□ -2.42
SRP54-204ENST00000553923 SPG11Q96JI7 2443 aa-0.07□□□□□ -2.42
SRP54-204ENST00000553923 LRRK2Q5S007 2527 aa-0.08□□□□□ -2.42
SRP54-204ENST00000553923 CELSR3Q9NYQ7 3312 aa-0.08□□□□□ -2.42
SRP54-204ENST00000553923 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
SRP54-204ENST00000553923 COL12A1Q99715 3063 aa-0.08□□□□□ -2.42
SRP54-204ENST00000553923 DNAH8Q96JB1 4490 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 MGAM2Q2M2H8 2515 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 MUC12Q9UKN1 5478 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 DNAH7Q8WXX0 4024 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 LINC01590Q5TEZ4 76 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 MYO18BQ8IUG5 2567 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 CHD7Q9P2D1 2997 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 STARD9Q9P2P6 4700 aa-0.09□□□□□ -2.42
SRP54-204ENST00000553923 SPTBN5Q9NRC6 3674 aaKnown RBP-0.1□□□□□ -2.42
SRP54-204ENST00000553923 MT1HP80294 61 aa-0.1□□□□□ -2.43
SRP54-204ENST00000553923 DEFB104AQ8WTQ1 72 aa-0.1□□□□□ -2.43
SRP54-204ENST00000553923 ACACAQ13085 2346 aa-0.1□□□□□ -2.43
SRP54-204ENST00000553923 MROH2BQ7Z745 1585 aa-0.11□□□□□ -2.43
SRP54-204ENST00000553923 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
SRP54-204ENST00000553923 STAB2Q8WWQ8 2551 aa-0.11□□□□□ -2.43
SRP54-204ENST00000553923 CRYBG3Q68DQ2 2970 aa-0.12□□□□□ -2.43
SRP54-204ENST00000553923 ITPR1Q14643 2758 aa-0.12□□□□□ -2.43
SRP54-204ENST00000553923 DUOX1Q9NRD9 1551 aa-0.13□□□□□ -2.43
SRP54-204ENST00000553923 KRTAP20-2Q3LI61 65 aa-0.13□□□□□ -2.43
SRP54-204ENST00000553923 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
SRP54-204ENST00000553923 USH2AO75445 5202 aa-0.14□□□□□ -2.43
SRP54-204ENST00000553923 CCDC168Q8NDH2 2452 aa-0.14□□□□□ -2.43
SRP54-204ENST00000553923 ADGRG4Q8IZF6 3080 aa-0.15□□□□□ -2.43
SRP54-204ENST00000553923 PLECQ15149 4684 aaKnown RBP-0.15□□□□□ -2.43
SRP54-204ENST00000553923 ITPR3Q14573 2671 aa-0.15□□□□□ -2.43
SRP54-204ENST00000553923 RIF1Q5UIP0 2472 aaKnown RBP-0.15□□□□□ -2.43
SRP54-204ENST00000553923 DEFB136Q30KP8 78 aa-0.15□□□□□ -2.43
SRP54-204ENST00000553923 RHPN1-AS1Q9BWJ2 59 aa-0.15□□□□□ -2.43
SRP54-204ENST00000553923 MUC17Q685J3 4493 aa-0.15□□□□□ -2.43
SRP54-204ENST00000553923 MGAQ8IWI9 3026 aa-0.16□□□□□ -2.43
SRP54-204ENST00000553923 CMYA5Q8N3K9 4069 aa-0.16□□□□□ -2.43
SRP54-204ENST00000553923 DYNC1H1Q14204 4646 aaKnown RBP-0.16□□□□□ -2.44
SRP54-204ENST00000553923 A0A096LNI7 61 aa-0.16□□□□□ -2.44
SRP54-204ENST00000553923 ARHGAP5-AS1Q96IT6 56 aa-0.16□□□□□ -2.44
SRP54-204ENST00000553923 DEFB4AO15263 64 aa-0.17□□□□□ -2.44
SRP54-204ENST00000553923 MT1EP04732 61 aa-0.17□□□□□ -2.44
SRP54-204ENST00000553923 MT4P47944 62 aa-0.17□□□□□ -2.44
SRP54-204ENST00000553923 FAM186AA6NE01 2351 aa-0.17□□□□□ -2.44
SRP54-204ENST00000553923 DNAH10Q8IVF4 4471 aa-0.18□□□□□ -2.44
SRP54-204ENST00000553923 USP9YO00507 2555 aaPredicted RBP-0.18□□□□□ -2.44
SRP54-204ENST00000553923 ZFHX4Q86UP3 3567 aa-0.18□□□□□ -2.44
SRP54-204ENST00000553923 MT1XP80297 61 aa-0.18□□□□□ -2.44
SRP54-204ENST00000553923 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
SRP54-204ENST00000553923 C5orf42Q9H799 3197 aa-0.19□□□□□ -2.44
SRP54-204ENST00000553923 MT1LQ93083 61 aa-0.19□□□□□ -2.44
SRP54-204ENST00000553923 CSMD1Q96PZ7 3565 aa-0.2□□□□□ -2.44
SRP54-204ENST00000553923 RELNP78509 3460 aa-0.2□□□□□ -2.44
SRP54-204ENST00000553923 RYR1P21817 5038 aa-0.2□□□□□ -2.44
SRP54-204ENST00000553923 GCC2Q8IWJ2 1684 aa-0.21□□□□□ -2.44
SRP54-204ENST00000553923 USP9XQ93008 2570 aaPredicted RBP-0.21□□□□□ -2.44
SRP54-204ENST00000553923 HTN1P15515 57 aa-0.21□□□□□ -2.44
SRP54-204ENST00000553923 DNAH17Q9UFH2 4485 aa-0.22□□□□□ -2.44
SRP54-204ENST00000553923 LAMA2P24043 3122 aaKnown RBP-0.22□□□□□ -2.44
SRP54-204ENST00000553923 SRCAPQ6ZRS2 3230 aa-0.23□□□□□ -2.45
SRP54-204ENST00000553923 TTTY10Q9BZA0 68 aa-0.23□□□□□ -2.45
SRP54-204ENST00000553923 EPPK1P58107 5090 aaKnown RBP-0.23□□□□□ -2.45
SRP54-204ENST00000553923 LAMA3Q16787 3333 aa-0.24□□□□□ -2.45
SRP54-204ENST00000553923 PRCDQ00LT1 54 aa-0.24□□□□□ -2.45
SRP54-204ENST00000553923 DMXL2Q8TDJ6 3036 aa-0.24□□□□□ -2.45
SRP54-204ENST00000553923 DNHD1Q96M86 4753 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 BIRC6Q9NR09 4857 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 H3BSH0 61 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 MT1GP13640 62 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 DEFB133Q30KQ1 61 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 HERC2O95714 4834 aa-0.25□□□□□ -2.45
SRP54-204ENST00000553923 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
SRP54-204ENST00000553923 K7EIM0 57 aa-0.26□□□□□ -2.45
SRP54-204ENST00000553923 TRRAPQ9Y4A5 3859 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms