RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-223ENST00000553686 NDUFC2O95298 119 aa2.61□□□□□ -1.99
ATXN3-223ENST00000553686 DNAL4O96015 105 aa2.61□□□□□ -1.99
ATXN3-223ENST00000553686 MT1BP07438 61 aa2.61□□□□□ -1.99
ATXN3-223ENST00000553686 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-223ENST00000553686 NPC2P61916 151 aa2.61□□□□□ -1.99
ATXN3-223ENST00000553686 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-223ENST00000553686 CLEC2BQ92478 149 aa2.6□□□□□ -1.99
ATXN3-223ENST00000553686 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-223ENST00000553686 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-223ENST00000553686 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-223ENST00000553686 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
ATXN3-223ENST00000553686 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-223ENST00000553686 Q6JHZ5 121 aa2.58□□□□□ -2
ATXN3-223ENST00000553686 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
ATXN3-223ENST00000553686 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
ATXN3-223ENST00000553686 ORMDL1Q9P0S3 153 aa2.58□□□□□ -2
ATXN3-223ENST00000553686 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-223ENST00000553686 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-223ENST00000553686 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-223ENST00000553686 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
ATXN3-223ENST00000553686 SMIM11BQ8TCY0 68 aa2.57□□□□□ -2
ATXN3-223ENST00000553686 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
ATXN3-223ENST00000553686 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 A0A1W2PNM2 257 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 F8WEM9 126 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 COX7BP24311 80 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
ATXN3-223ENST00000553686 TRBV7-6A0A0J9YX20 115 aa2.55□□□□□ -2
ATXN3-223ENST00000553686 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-223ENST00000553686 IGLV5-48A0A075B6I7 105 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 hADV29S1A0JD25 119 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
ATXN3-223ENST00000553686 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
ATXN3-223ENST00000553686 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-223ENST00000553686 LINC00313P59037 77 aa2.53□□□□□ -2
ATXN3-223ENST00000553686 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-223ENST00000553686 LINC00575Q6W349 94 aa2.53□□□□□ -2
ATXN3-223ENST00000553686 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-223ENST00000553686 SPINK7P58062 85 aa2.52□□□□□ -2.01
ATXN3-223ENST00000553686 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
ATXN3-223ENST00000553686 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-223ENST00000553686 SPRR2GQ9BYE4 73 aa2.52□□□□□ -2.01
ATXN3-223ENST00000553686 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-223ENST00000553686 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
ATXN3-223ENST00000553686 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
ATXN3-223ENST00000553686 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-223ENST00000553686 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
ATXN3-223ENST00000553686 Q6ZQT0 140 aa2.5□□□□□ -2.01
ATXN3-223ENST00000553686 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
ATXN3-223ENST00000553686 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-223ENST00000553686 H1FX-AS1Q4G0G2 97 aa2.49□□□□□ -2.01
ATXN3-223ENST00000553686 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
ATXN3-223ENST00000553686 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
ATXN3-223ENST00000553686 Q6ZQY7 126 aa2.48□□□□□ -2.01
ATXN3-223ENST00000553686 WFDC13Q8IUB5 93 aa2.48□□□□□ -2.01
ATXN3-223ENST00000553686 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
ATXN3-223ENST00000553686 KLKP1Q107X0 134 aa2.47□□□□□ -2.01
ATXN3-223ENST00000553686 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
ATXN3-223ENST00000553686 A0A1B0GVX0 72 aa2.46□□□□□ -2.02
ATXN3-223ENST00000553686 A0A087WVE0 104 aa2.45□□□□□ -2.02
ATXN3-223ENST00000553686 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
ATXN3-223ENST00000553686 SERP1Q9Y6X1 66 aa2.45□□□□□ -2.02
ATXN3-223ENST00000553686 NREPQ16612 68 aa2.44□□□□□ -2.02
ATXN3-223ENST00000553686 H7BZZ5 65 aa2.43□□□□□ -2.02
ATXN3-223ENST00000553686 C20orf197Q8N268 126 aa2.43□□□□□ -2.02
ATXN3-223ENST00000553686 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
ATXN3-223ENST00000553686 BPY2O14599 106 aa2.42□□□□□ -2.02
ATXN3-223ENST00000553686 A0A087WSZ3 146 aa2.41□□□□□ -2.02
ATXN3-223ENST00000553686 TMEM254Q8TBM7 123 aa2.41□□□□□ -2.02
ATXN3-223ENST00000553686 IGKV4-1P06312 121 aa2.4□□□□□ -2.03
ATXN3-223ENST00000553686 Q5W150 140 aa2.4□□□□□ -2.03
ATXN3-223ENST00000553686 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
ATXN3-223ENST00000553686 NDUFB1O75438 58 aa2.39□□□□□ -2.03
ATXN3-223ENST00000553686 IGHV6-1A0A0B4J1U7 121 aa2.38□□□□□ -2.03
ATXN3-223ENST00000553686 H3BPC8 53 aa2.38□□□□□ -2.03
ATXN3-223ENST00000553686 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
ATXN3-223ENST00000553686 MT4P47944 62 aa2.38□□□□□ -2.03
ATXN3-223ENST00000553686 C8orf87E5RJ46 101 aa2.37□□□□□ -2.03
ATXN3-223ENST00000553686 PRR15Q8IV56 129 aa2.37□□□□□ -2.03
ATXN3-223ENST00000553686 CRIPTQ9P021 101 aa2.37□□□□□ -2.03
ATXN3-223ENST00000553686 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
ATXN3-223ENST00000553686 CYP4F30PQ9H0H9 118 aa2.36□□□□□ -2.03
ATXN3-223ENST00000553686 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
ATXN3-223ENST00000553686 SNURFQ9Y675 71 aa2.36□□□□□ -2.03
ATXN3-223ENST00000553686 V9GYY9 64 aa2.36□□□□□ -2.03
ATXN3-223ENST00000553686 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
ATXN3-223ENST00000553686 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
ATXN3-223ENST00000553686 C4orf26Q17RF5 130 aa2.35□□□□□ -2.03
ATXN3-223ENST00000553686 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
ATXN3-223ENST00000553686 MP68P56378 58 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms