RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
NEDD1-205ENST00000553609 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
NEDD1-205ENST00000553609 CASC2Q6XLA1 102 aa6.09□□□□□ -1.43
NEDD1-205ENST00000553609 Q8N9L7 120 aa6.09□□□□□ -1.43
NEDD1-205ENST00000553609 BPY2O14599 106 aa6.08□□□□□ -1.44
NEDD1-205ENST00000553609 CXCL6P80162 114 aa6.08□□□□□ -1.44
NEDD1-205ENST00000553609 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
NEDD1-205ENST00000553609 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
NEDD1-205ENST00000553609 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
NEDD1-205ENST00000553609 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
NEDD1-205ENST00000553609 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
NEDD1-205ENST00000553609 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
NEDD1-205ENST00000553609 MT1XP80297 61 aa5.99□□□□□ -1.45
NEDD1-205ENST00000553609 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
NEDD1-205ENST00000553609 A0A087WVE0 104 aa5.96□□□□□ -1.46
NEDD1-205ENST00000553609 M0R143 59 aa5.94□□□□□ -1.46
NEDD1-205ENST00000553609 SPRR2DP22532 72 aa5.94□□□□□ -1.46
NEDD1-205ENST00000553609 H3BT86 120 aa5.93□□□□□ -1.46
NEDD1-205ENST00000553609 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
NEDD1-205ENST00000553609 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
NEDD1-205ENST00000553609 H0YAA0 97 aa5.87□□□□□ -1.47
NEDD1-205ENST00000553609 TSTD3H0UI37 97 aa5.83□□□□□ -1.48
NEDD1-205ENST00000553609 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
NEDD1-205ENST00000553609 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
NEDD1-205ENST00000553609 A8MUN3 132 aa5.82□□□□□ -1.48
NEDD1-205ENST00000553609 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
NEDD1-205ENST00000553609 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
NEDD1-205ENST00000553609 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
NEDD1-205ENST00000553609 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
NEDD1-205ENST00000553609 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
NEDD1-205ENST00000553609 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
NEDD1-205ENST00000553609 NDUFC1O43677 76 aa5.75□□□□□ -1.49
NEDD1-205ENST00000553609 K7EP34 96 aa5.74□□□□□ -1.49
NEDD1-205ENST00000553609 TAX1BP3O14907 124 aa5.74□□□□□ -1.49
NEDD1-205ENST00000553609 BATFQ16520 125 aa5.74□□□□□ -1.49
NEDD1-205ENST00000553609 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
NEDD1-205ENST00000553609 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
NEDD1-205ENST00000553609 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
NEDD1-205ENST00000553609 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
NEDD1-205ENST00000553609 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
NEDD1-205ENST00000553609 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
NEDD1-205ENST00000553609 P0C880 135 aa5.63□□□□□ -1.51
NEDD1-205ENST00000553609 R4GN34 69 aa5.63□□□□□ -1.51
NEDD1-205ENST00000553609 SMIM6P0DI80 62 aa5.61□□□□□ -1.51
NEDD1-205ENST00000553609 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
NEDD1-205ENST00000553609 M0QZ58 72 aa5.58□□□□□ -1.52
NEDD1-205ENST00000553609 ACYP1P07311 99 aa5.58□□□□□ -1.52
NEDD1-205ENST00000553609 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
NEDD1-205ENST00000553609 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
NEDD1-205ENST00000553609 H0Y9P7 68 aa5.53□□□□□ -1.52
NEDD1-205ENST00000553609 ATOX1O00244 68 aa5.51□□□□□ -1.53
NEDD1-205ENST00000553609 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
NEDD1-205ENST00000553609 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
NEDD1-205ENST00000553609 UQCRQO14949 82 aa5.5□□□□□ -1.53
NEDD1-205ENST00000553609 ETDBQ3ZM63 59 aa5.4□□□□□ -1.54
NEDD1-205ENST00000553609 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
NEDD1-205ENST00000553609 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
NEDD1-205ENST00000553609 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
NEDD1-205ENST00000553609 COL5A1-AS1Q5SY13 56 aa5.36□□□□□ -1.55
NEDD1-205ENST00000553609 HIST1H4AP62805 103 aaKnown RBP5.35□□□□□ -1.55
NEDD1-205ENST00000553609 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
NEDD1-205ENST00000553609 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
NEDD1-205ENST00000553609 F8W1H4 67 aa5.33□□□□□ -1.56
NEDD1-205ENST00000553609 MT1EP04732 61 aa5.33□□□□□ -1.56
NEDD1-205ENST00000553609 DMAC1Q96GE9 116 aa5.33□□□□□ -1.56
NEDD1-205ENST00000553609 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
NEDD1-205ENST00000553609 OCR1Q9BZK8 76 aa5.29□□□□□ -1.56
NEDD1-205ENST00000553609 MT-ATP8P03928 68 aa5.28□□□□□ -1.56
NEDD1-205ENST00000553609 GTF2H5Q6ZYL4 71 aa5.28□□□□□ -1.56
NEDD1-205ENST00000553609 MP68P56378 58 aa5.27□□□□□ -1.57
NEDD1-205ENST00000553609 FAM240AA0A1B0GVK7 77 aa5.26□□□□□ -1.57
NEDD1-205ENST00000553609 LOC105371267A0A1B0GV96 52 aa5.25□□□□□ -1.57
NEDD1-205ENST00000553609 MT4P47944 62 aa5.23□□□□□ -1.57
NEDD1-205ENST00000553609 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
NEDD1-205ENST00000553609 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
NEDD1-205ENST00000553609 TRAV7A0A075B6U4 112 aa5.16□□□□□ -1.58
NEDD1-205ENST00000553609 H3BPC8 53 aa5.16□□□□□ -1.58
NEDD1-205ENST00000553609 MT1GP13640 62 aa5.16□□□□□ -1.58
NEDD1-205ENST00000553609 LINC00643Q86TS7 51 aa5.14□□□□□ -1.59
NEDD1-205ENST00000553609 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
NEDD1-205ENST00000553609 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
NEDD1-205ENST00000553609 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
NEDD1-205ENST00000553609 MT1MQ8N339 61 aa5.1□□□□□ -1.59
NEDD1-205ENST00000553609 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
NEDD1-205ENST00000553609 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
NEDD1-205ENST00000553609 ACYP2P14621 99 aa5.05□□□□□ -1.6
NEDD1-205ENST00000553609 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
NEDD1-205ENST00000553609 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
NEDD1-205ENST00000553609 MT1LQ93083 61 aa5.03□□□□□ -1.6
NEDD1-205ENST00000553609 A0A0D9SG42 100 aa5.02□□□□□ -1.61
NEDD1-205ENST00000553609 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
NEDD1-205ENST00000553609 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
NEDD1-205ENST00000553609 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
NEDD1-205ENST00000553609 PCP4L1A6NKN8 68 aa4.88□□□□□ -1.63
NEDD1-205ENST00000553609 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
NEDD1-205ENST00000553609 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
NEDD1-205ENST00000553609 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
NEDD1-205ENST00000553609 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
NEDD1-205ENST00000553609 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
NEDD1-205ENST00000553609 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms