RNA–Protein interactions for RNA: ENST00000553312.1

AL079307.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL079307.1, Length 5,982 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.1-201ENST00000553312 SVEP1Q4LDE5 3571 aa3.54□□□□□ -1.84
AL079307.1-201ENST00000553312 MT1HP80294 61 aa3.54□□□□□ -1.84
AL079307.1-201ENST00000553312 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
AL079307.1-201ENST00000553312 ZNF469Q96JG9 3925 aaPredicted RBP3.53□□□□□ -1.84
AL079307.1-201ENST00000553312 CUBNO60494 3623 aa3.51□□□□□ -1.85
AL079307.1-201ENST00000553312 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
AL079307.1-201ENST00000553312 TRRAPQ9Y4A5 3859 aa3.47□□□□□ -1.85
AL079307.1-201ENST00000553312 DNAH9Q9NYC9 4486 aa3.46□□□□□ -1.86
AL079307.1-201ENST00000553312 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
AL079307.1-201ENST00000553312 VPS13CQ709C8 3753 aa3.45□□□□□ -1.86
AL079307.1-201ENST00000553312 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
AL079307.1-201ENST00000553312 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
AL079307.1-201ENST00000553312 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
AL079307.1-201ENST00000553312 DNHD1Q96M86 4753 aa3.4□□□□□ -1.87
AL079307.1-201ENST00000553312 MT2AP02795 61 aa3.4□□□□□ -1.87
AL079307.1-201ENST00000553312 DNAH10Q8IVF4 4471 aa3.39□□□□□ -1.87
AL079307.1-201ENST00000553312 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
AL079307.1-201ENST00000553312 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
AL079307.1-201ENST00000553312 DNAH2Q9P225 4427 aa3.37□□□□□ -1.87
AL079307.1-201ENST00000553312 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
AL079307.1-201ENST00000553312 ANK2Q01484 3957 aa3.35□□□□□ -1.87
AL079307.1-201ENST00000553312 SPRR2EP22531 72 aa3.35□□□□□ -1.87
AL079307.1-201ENST00000553312 SPRR2BP35325 72 aa3.35□□□□□ -1.87
AL079307.1-201ENST00000553312 SPRR2AP35326 72 aa3.35□□□□□ -1.87
AL079307.1-201ENST00000553312 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
AL079307.1-201ENST00000553312 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
AL079307.1-201ENST00000553312 MT1FP04733 61 aa3.29□□□□□ -1.88
AL079307.1-201ENST00000553312 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
AL079307.1-201ENST00000553312 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
AL079307.1-201ENST00000553312 PLECQ15149 4684 aaKnown RBP3.27□□□□□ -1.89
AL079307.1-201ENST00000553312 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
AL079307.1-201ENST00000553312 DYNC1H1Q14204 4646 aaKnown RBP3.26□□□□□ -1.89
AL079307.1-201ENST00000553312 SPRR2DP22532 72 aa3.26□□□□□ -1.89
AL079307.1-201ENST00000553312 DNAH17Q9UFH2 4485 aa3.26□□□□□ -1.89
AL079307.1-201ENST00000553312 FAT2Q9NYQ8 4349 aa3.25□□□□□ -1.89
AL079307.1-201ENST00000553312 FAT1Q14517 4588 aa3.23□□□□□ -1.89
AL079307.1-201ENST00000553312 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
AL079307.1-201ENST00000553312 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.9
AL079307.1-201ENST00000553312 VPS13DQ5THJ4 4388 aa3.21□□□□□ -1.9
AL079307.1-201ENST00000553312 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
AL079307.1-201ENST00000553312 PRKDCP78527 4128 aaKnown RBP3.2□□□□□ -1.9
AL079307.1-201ENST00000553312 HERC1Q15751 4861 aa3.19□□□□□ -1.9
AL079307.1-201ENST00000553312 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
AL079307.1-201ENST00000553312 LCE2BO14633 110 aa3.16□□□□□ -1.9
AL079307.1-201ENST00000553312 MT1GP13640 62 aa3.16□□□□□ -1.9
AL079307.1-201ENST00000553312 LRP1BQ9NZR2 4599 aa3.15□□□□□ -1.9
AL079307.1-201ENST00000553312 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.9
AL079307.1-201ENST00000553312 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
AL079307.1-201ENST00000553312 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
AL079307.1-201ENST00000553312 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
AL079307.1-201ENST00000553312 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
AL079307.1-201ENST00000553312 RYR2Q92736 4967 aa3.11□□□□□ -1.91
AL079307.1-201ENST00000553312 SACSQ9NZJ4 4579 aa3.11□□□□□ -1.91
AL079307.1-201ENST00000553312 CMYA5Q8N3K9 4069 aa3.1□□□□□ -1.91
AL079307.1-201ENST00000553312 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
AL079307.1-201ENST00000553312 RYR1P21817 5038 aa3.08□□□□□ -1.92
AL079307.1-201ENST00000553312 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
AL079307.1-201ENST00000553312 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
AL079307.1-201ENST00000553312 KRTAP19-8Q3LI54 63 aa3.06□□□□□ -1.92
AL079307.1-201ENST00000553312 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
AL079307.1-201ENST00000553312 RYR3Q15413 4870 aa3.06□□□□□ -1.92
AL079307.1-201ENST00000553312 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
AL079307.1-201ENST00000553312 DNAH7Q8WXX0 4024 aa3.05□□□□□ -1.92
AL079307.1-201ENST00000553312 MT1XP80297 61 aa3.05□□□□□ -1.92
AL079307.1-201ENST00000553312 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
AL079307.1-201ENST00000553312 HSPG2P98160 4391 aa3.01□□□□□ -1.93
AL079307.1-201ENST00000553312 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
AL079307.1-201ENST00000553312 PRM1P04553 51 aa2.99□□□□□ -1.93
AL079307.1-201ENST00000553312 LCE2CQ5TA81 110 aa2.98□□□□□ -1.93
AL079307.1-201ENST00000553312 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
AL079307.1-201ENST00000553312 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
AL079307.1-201ENST00000553312 LCE2DQ5TA82 110 aaPredicted RBP2.96□□□□□ -1.94
AL079307.1-201ENST00000553312 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
AL079307.1-201ENST00000553312 KRTAP4-8A0A0G2JLE6 195 aa2.95□□□□□ -1.94
AL079307.1-201ENST00000553312 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
AL079307.1-201ENST00000553312 KRTAP9-3Q9BYQ3 159 aa2.94□□□□□ -1.94
AL079307.1-201ENST00000553312 APOBP04114 4563 aaKnown RBP2.94□□□□□ -1.94
AL079307.1-201ENST00000553312 LRP1Q07954 4544 aaKnown RBP2.94□□□□□ -1.94
AL079307.1-201ENST00000553312 HERC2O95714 4834 aa2.94□□□□□ -1.94
AL079307.1-201ENST00000553312 MT1BP07438 61 aa2.94□□□□□ -1.94
AL079307.1-201ENST00000553312 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
AL079307.1-201ENST00000553312 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
AL079307.1-201ENST00000553312 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
AL079307.1-201ENST00000553312 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
AL079307.1-201ENST00000553312 FRAS1Q86XX4 4008 aa2.87□□□□□ -1.95
AL079307.1-201ENST00000553312 LYSTQ99698 3801 aa2.87□□□□□ -1.95
AL079307.1-201ENST00000553312 MT1LQ93083 61 aa2.86□□□□□ -1.95
AL079307.1-201ENST00000553312 PKD1P98161 4303 aa2.86□□□□□ -1.95
AL079307.1-201ENST00000553312 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
AL079307.1-201ENST00000553312 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
AL079307.1-201ENST00000553312 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
AL079307.1-201ENST00000553312 MT4P47944 62 aa2.83□□□□□ -1.96
AL079307.1-201ENST00000553312 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
AL079307.1-201ENST00000553312 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
AL079307.1-201ENST00000553312 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
AL079307.1-201ENST00000553312 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
AL079307.1-201ENST00000553312 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
AL079307.1-201ENST00000553312 MT3P25713 68 aa2.8□□□□□ -1.96
AL079307.1-201ENST00000553312 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
AL079307.1-201ENST00000553312 MT1EP04732 61 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms