RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-218ENST00000553309 RNASE3P12724 160 aaKnown RBP2.77□□□□□ -1.97
ATXN3-218ENST00000553309 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
ATXN3-218ENST00000553309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-218ENST00000553309 COA5Q86WW8 74 aa2.77□□□□□ -1.97
ATXN3-218ENST00000553309 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
ATXN3-218ENST00000553309 IGLV10-54A0A075B6I4 117 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 A0A096LPF7 62 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 TRGV4A0A0C4DH28 118 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 TRBV6-4A0A1B0GX49 114 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 A8MWP4 228 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 C1orf137Q5JT78 98 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 WFDC10BQ8IUB3 73 aa2.76□□□□□ -1.97
ATXN3-218ENST00000553309 A8MTW9 85 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 P0C880 135 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 COX7BP24311 80 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 PRR9Q5T870 116 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 CHCHD7Q9BUK0 85 aa2.75□□□□□ -1.97
ATXN3-218ENST00000553309 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
ATXN3-218ENST00000553309 M0QY20 66 aa2.74□□□□□ -1.97
ATXN3-218ENST00000553309 LINC00483Q53H64 154 aa2.74□□□□□ -1.97
ATXN3-218ENST00000553309 LINC00575Q6W349 94 aa2.74□□□□□ -1.97
ATXN3-218ENST00000553309 C20orf166-AS1Q96NR2 134 aa2.74□□□□□ -1.97
ATXN3-218ENST00000553309 CDKN2A-AS1Q9UH64 79 aa2.74□□□□□ -1.97
ATXN3-218ENST00000553309 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 UQCR11O14957 56 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 INSP01308 110 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 HTN1P15515 57 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 LINC00158P58513 81 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 DMAC1Q96GE9 116 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
ATXN3-218ENST00000553309 NOP10Q9NPE3 64 aaKnown RBP2.73□□□□□ -1.97
ATXN3-218ENST00000553309 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
ATXN3-218ENST00000553309 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-218ENST00000553309 SPINK13Q1W4C9 94 aa2.71□□□□□ -1.98
ATXN3-218ENST00000553309 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
ATXN3-218ENST00000553309 H3BNG1 76 aa2.7□□□□□ -1.98
ATXN3-218ENST00000553309 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
ATXN3-218ENST00000553309 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
ATXN3-218ENST00000553309 Q6ZQY7 126 aa2.68□□□□□ -1.98
ATXN3-218ENST00000553309 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
ATXN3-218ENST00000553309 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
ATXN3-218ENST00000553309 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
ATXN3-218ENST00000553309 COX6A2Q02221 97 aa2.67□□□□□ -1.98
ATXN3-218ENST00000553309 NEBP20929 6669 aa2.65□□□□□ -1.98
ATXN3-218ENST00000553309 A0A1B0GVX0 72 aa2.65□□□□□ -1.99
ATXN3-218ENST00000553309 A8MUU9 505 aa2.65□□□□□ -1.99
ATXN3-218ENST00000553309 Q5W150 140 aa2.65□□□□□ -1.99
ATXN3-218ENST00000553309 Q8IZM0 81 aa2.65□□□□□ -1.99
ATXN3-218ENST00000553309 USH2AO75445 5202 aa2.65□□□□□ -1.99
ATXN3-218ENST00000553309 TRGV1A0A0A0MS02 117 aa2.64□□□□□ -1.99
ATXN3-218ENST00000553309 TLX1NBP0CAT3 122 aa2.64□□□□□ -1.99
ATXN3-218ENST00000553309 COX17Q14061 63 aa2.64□□□□□ -1.99
ATXN3-218ENST00000553309 LINC01556Q5JQF7 62 aa2.64□□□□□ -1.99
ATXN3-218ENST00000553309 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
ATXN3-218ENST00000553309 IGKV3OR2-268A0A0C4DH90 116 aa2.63□□□□□ -1.99
ATXN3-218ENST00000553309 A0A1B0GU69 56 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 HRES1P13985 223 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 C15orf56Q8N910 161 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
ATXN3-218ENST00000553309 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
ATXN3-218ENST00000553309 IGLV6-57P01721 117 aa2.6□□□□□ -1.99
ATXN3-218ENST00000553309 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
ATXN3-218ENST00000553309 KRTAP4-1Q9BYQ7 146 aa2.6□□□□□ -1.99
ATXN3-218ENST00000553309 K7EQZ3 153 aa2.59□□□□□ -1.99
ATXN3-218ENST00000553309 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
ATXN3-218ENST00000553309 TOMM7Q9P0U1 55 aa2.59□□□□□ -1.99
ATXN3-218ENST00000553309 PSORS1C2Q9UIG4 136 aa2.59□□□□□ -1.99
ATXN3-218ENST00000553309 ACYP2P14621 99 aa2.58□□□□□ -2
ATXN3-218ENST00000553309 MT1HP80294 61 aa2.58□□□□□ -2
ATXN3-218ENST00000553309 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
ATXN3-218ENST00000553309 IGLV7-43P04211 117 aa2.57□□□□□ -2
ATXN3-218ENST00000553309 SPACA4Q8TDM5 124 aa2.57□□□□□ -2
ATXN3-218ENST00000553309 GVQW2A0A096LPI5 108 aaPredicted RBP2.55□□□□□ -2
ATXN3-218ENST00000553309 IGKV2-24A0A0C4DH68 120 aa2.55□□□□□ -2
ATXN3-218ENST00000553309 ANGP03950 147 aaKnown RBP2.55□□□□□ -2
ATXN3-218ENST00000553309 WFDC13Q8IUB5 93 aa2.55□□□□□ -2
ATXN3-218ENST00000553309 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
ATXN3-218ENST00000553309 LINC00304Q8N9R0 145 aa2.54□□□□□ -2
ATXN3-218ENST00000553309 IGFL1Q6UW32 110 aa2.53□□□□□ -2
ATXN3-218ENST00000553309 Q96NJ1 140 aa2.53□□□□□ -2
ATXN3-218ENST00000553309 A0A1B0GU33 70 aa2.52□□□□□ -2.01
ATXN3-218ENST00000553309 M0R2T5 61 aa2.52□□□□□ -2.01
ATXN3-218ENST00000553309 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
ATXN3-218ENST00000553309 PCOTHQ58A44 107 aa2.52□□□□□ -2.01
ATXN3-218ENST00000553309 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
ATXN3-218ENST00000553309 KRTAP19-2Q3LHN2 52 aa2.51□□□□□ -2.01
ATXN3-218ENST00000553309 TPRXLQ17RH7 258 aa2.5□□□□□ -2.01
ATXN3-218ENST00000553309 C6orf48Q9UBA6 75 aa2.5□□□□□ -2.01
ATXN3-218ENST00000553309 SSBP3-AS1Q7Z2R9 100 aa2.49□□□□□ -2.01
ATXN3-218ENST00000553309 A0A096LNI7 61 aa2.48□□□□□ -2.01
ATXN3-218ENST00000553309 CLPSL2Q6UWE3 100 aa2.48□□□□□ -2.01
ATXN3-218ENST00000553309 A0A1W2PNN7 141 aa2.47□□□□□ -2.01
ATXN3-218ENST00000553309 UNQ6190/PRO20217Q6UXQ8 127 aa2.47□□□□□ -2.01
ATXN3-218ENST00000553309 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms