RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 C14orf132Q9NPU4 83 aa5.29□□□□□ -1.56
VPS29-211ENST00000553128 VAMP8Q9BV40 100 aa5.28□□□□□ -1.56
VPS29-211ENST00000553128 A0A087WVE0 104 aa5.27□□□□□ -1.57
VPS29-211ENST00000553128 JMJD7-PLA2G4BH0Y9G9 81 aa5.26□□□□□ -1.57
VPS29-211ENST00000553128 S100A6P06703 90 aa5.26□□□□□ -1.57
VPS29-211ENST00000553128 HSD52Q0P140 79 aa5.26□□□□□ -1.57
VPS29-211ENST00000553128 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
VPS29-211ENST00000553128 Q8N9L7 120 aa5.24□□□□□ -1.57
VPS29-211ENST00000553128 PDE6GP18545 87 aa5.23□□□□□ -1.57
VPS29-211ENST00000553128 CXCL6P80162 114 aa5.23□□□□□ -1.57
VPS29-211ENST00000553128 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
VPS29-211ENST00000553128 A8MUN3 132 aa5.19□□□□□ -1.58
VPS29-211ENST00000553128 BPY2O14599 106 aa5.19□□□□□ -1.58
VPS29-211ENST00000553128 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
VPS29-211ENST00000553128 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
VPS29-211ENST00000553128 ATXN8Q156A1 80 aa5.17□□□□□ -1.58
VPS29-211ENST00000553128 S100A1P23297 94 aa5.16□□□□□ -1.58
VPS29-211ENST00000553128 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
VPS29-211ENST00000553128 H0YAA0 97 aa5.13□□□□□ -1.59
VPS29-211ENST00000553128 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
VPS29-211ENST00000553128 NAA38Q9BRA0 125 aaKnown RBP5.13□□□□□ -1.59
VPS29-211ENST00000553128 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
VPS29-211ENST00000553128 C9orf118A6NHY6 69 aa5.09□□□□□ -1.59
VPS29-211ENST00000553128 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
VPS29-211ENST00000553128 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
VPS29-211ENST00000553128 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
VPS29-211ENST00000553128 NDUFC1O43677 76 aa5.03□□□□□ -1.6
VPS29-211ENST00000553128 K7EP34 96 aa5.02□□□□□ -1.61
VPS29-211ENST00000553128 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
VPS29-211ENST00000553128 PYY3Q5JQD4 70 aa5.01□□□□□ -1.61
VPS29-211ENST00000553128 UQCR10Q9UDW1 63 aa5.01□□□□□ -1.61
VPS29-211ENST00000553128 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
VPS29-211ENST00000553128 R4GN34 69 aa4.99□□□□□ -1.61
VPS29-211ENST00000553128 MT4P47944 62 aa4.97□□□□□ -1.61
VPS29-211ENST00000553128 P0C880 135 aa4.96□□□□□ -1.62
VPS29-211ENST00000553128 M0QZ58 72 aa4.95□□□□□ -1.62
VPS29-211ENST00000553128 TP53AIP1Q9HCN2 124 aa4.95□□□□□ -1.62
VPS29-211ENST00000553128 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
VPS29-211ENST00000553128 H3BT86 120 aa4.89□□□□□ -1.63
VPS29-211ENST00000553128 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
VPS29-211ENST00000553128 TSTD3H0UI37 97 aa4.88□□□□□ -1.63
VPS29-211ENST00000553128 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
VPS29-211ENST00000553128 LOC101927531A0A1B0GV80 90 aa4.85□□□□□ -1.63
VPS29-211ENST00000553128 MT1EP04732 61 aa4.85□□□□□ -1.63
VPS29-211ENST00000553128 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
VPS29-211ENST00000553128 UBL5Q9BZL1 73 aa4.83□□□□□ -1.64
VPS29-211ENST00000553128 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
VPS29-211ENST00000553128 M0R143 59 aa4.82□□□□□ -1.64
VPS29-211ENST00000553128 ACYP1P07311 99 aa4.82□□□□□ -1.64
VPS29-211ENST00000553128 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
VPS29-211ENST00000553128 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
VPS29-211ENST00000553128 C20orf197Q8N268 126 aa4.79□□□□□ -1.64
VPS29-211ENST00000553128 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
VPS29-211ENST00000553128 SPCS1Q9Y6A9 102 aa4.78□□□□□ -1.64
VPS29-211ENST00000553128 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
VPS29-211ENST00000553128 BATFQ16520 125 aa4.73□□□□□ -1.65
VPS29-211ENST00000553128 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
VPS29-211ENST00000553128 A0A1W2PPM0 123 aa4.7□□□□□ -1.66
VPS29-211ENST00000553128 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
VPS29-211ENST00000553128 H0Y9P7 68 aa4.69□□□□□ -1.66
VPS29-211ENST00000553128 MT1GP13640 62 aa4.68□□□□□ -1.66
VPS29-211ENST00000553128 TAX1BP3O14907 124 aa4.66□□□□□ -1.66
VPS29-211ENST00000553128 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
VPS29-211ENST00000553128 MT1MQ8N339 61 aa4.65□□□□□ -1.67
VPS29-211ENST00000553128 ATOX1O00244 68 aa4.63□□□□□ -1.67
VPS29-211ENST00000553128 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
VPS29-211ENST00000553128 UQCRQO14949 82 aa4.62□□□□□ -1.67
VPS29-211ENST00000553128 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
VPS29-211ENST00000553128 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
VPS29-211ENST00000553128 PRO0461Q9UI25 63 aa4.59□□□□□ -1.67
VPS29-211ENST00000553128 LINC00208Q96KT6 92 aa4.57□□□□□ -1.68
VPS29-211ENST00000553128 MT1LQ93083 61 aa4.54□□□□□ -1.68
VPS29-211ENST00000553128 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
VPS29-211ENST00000553128 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
VPS29-211ENST00000553128 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
VPS29-211ENST00000553128 A0A0D9SG42 100 aa4.48□□□□□ -1.69
VPS29-211ENST00000553128 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
VPS29-211ENST00000553128 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
VPS29-211ENST00000553128 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
VPS29-211ENST00000553128 MP68P56378 58 aa4.4□□□□□ -1.71
VPS29-211ENST00000553128 PCP4P48539 62 aa4.39□□□□□ -1.71
VPS29-211ENST00000553128 ETDBQ3ZM63 59 aa4.39□□□□□ -1.71
VPS29-211ENST00000553128 SMIM6P0DI80 62 aa4.37□□□□□ -1.71
VPS29-211ENST00000553128 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
VPS29-211ENST00000553128 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
VPS29-211ENST00000553128 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
VPS29-211ENST00000553128 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
VPS29-211ENST00000553128 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
VPS29-211ENST00000553128 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
VPS29-211ENST00000553128 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
VPS29-211ENST00000553128 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
VPS29-211ENST00000553128 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
VPS29-211ENST00000553128 F8W1H4 67 aa4.27□□□□□ -1.73
VPS29-211ENST00000553128 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
VPS29-211ENST00000553128 H3BPC8 53 aa4.25□□□□□ -1.73
VPS29-211ENST00000553128 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
VPS29-211ENST00000553128 ACYP2P14621 99 aa4.24□□□□□ -1.73
VPS29-211ENST00000553128 COL5A1-AS1Q5SY13 56 aa4.23□□□□□ -1.73
VPS29-211ENST00000553128 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
VPS29-211ENST00000553128 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms