RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	IGKV4-1	P06312	121 aa		3.57	□□□□□ -1.84
PFKM-231	ENST00000553055	VPS13B	Q7Z7G8	4022 aa		3.56	□□□□□ -1.84
PFKM-231	ENST00000553055	FSIP2	Q5CZC0	6907 aa		3.56	□□□□□ -1.84
PFKM-231	ENST00000553055	ANG	P03950	147 aa	Known RBP	3.56	□□□□□ -1.84
PFKM-231	ENST00000553055	CLPSL2	Q6UWE3	100 aa		3.56	□□□□□ -1.84
PFKM-231	ENST00000553055	RPL37A	P61513	92 aa	Known RBP	3.55	□□□□□ -1.84
PFKM-231	ENST00000553055	LRP2	P98164	4655 aa		3.55	□□□□□ -1.84
PFKM-231	ENST00000553055	LOC101927531	A0A1B0GV80	90 aa		3.54	□□□□□ -1.84
PFKM-231	ENST00000553055	DEFB130B	P0DP73	79 aa		3.54	□□□□□ -1.84
PFKM-231	ENST00000553055	DEFB130A	P0DP74	79 aa		3.54	□□□□□ -1.84
PFKM-231	ENST00000553055	LELP1	Q5T871	98 aa		3.54	□□□□□ -1.84
PFKM-231	ENST00000553055	NDUFB1	O75438	58 aa		3.53	□□□□□ -1.84
PFKM-231	ENST00000553055	UNQ6190/PRO20217	Q6UXQ8	127 aa		3.53	□□□□□ -1.84
PFKM-231	ENST00000553055	C6orf48	Q9UBA6	75 aa		3.52	□□□□□ -1.85
PFKM-231	ENST00000553055	IGLV5-48	A0A075B6I7	105 aa		3.51	□□□□□ -1.85
PFKM-231	ENST00000553055	ETDC	A0A1B0GVM5	59 aa		3.51	□□□□□ -1.85
PFKM-231	ENST00000553055	CHKB-CPT1B	H3BT56	60 aa		3.51	□□□□□ -1.85
PFKM-231	ENST00000553055	SMR3B	P02814	79 aa	Predicted RBP	3.51	□□□□□ -1.85
PFKM-231	ENST00000553055	ZCCHC13	Q8WW36	166 aa	Known RBP	3.51	□□□□□ -1.85
PFKM-231	ENST00000553055		A0A096LPF7	62 aa		3.5	□□□□□ -1.85
PFKM-231	ENST00000553055	KRTAP10-6	P60371	365 aa	Predicted RBP	3.5	□□□□□ -1.85
PFKM-231	ENST00000553055	TRAV22	A0A0B4J277	110 aa		3.48	□□□□□ -1.85
PFKM-231	ENST00000553055	SPRR4	Q96PI1	79 aa		3.48	□□□□□ -1.85
PFKM-231	ENST00000553055	KCNQ1DN	Q9H478	68 aa		3.48	□□□□□ -1.85
PFKM-231	ENST00000553055	PKHD1L1	Q86WI1	4243 aa		3.47	□□□□□ -1.85
PFKM-231	ENST00000553055	LRP1	Q07954	4544 aa	Known RBP	3.46	□□□□□ -1.86
PFKM-231	ENST00000553055	NBDY	A0A0U1RRE5	68 aa		3.46	□□□□□ -1.86
PFKM-231	ENST00000553055	SPART-AS1	P0CW21	52 aa		3.46	□□□□□ -1.86
PFKM-231	ENST00000553055		Q5VV11	94 aa		3.46	□□□□□ -1.86
PFKM-231	ENST00000553055		H3BNG1	76 aa		3.45	□□□□□ -1.86
PFKM-231	ENST00000553055	DEFB135	Q30KP9	77 aa		3.45	□□□□□ -1.86
PFKM-231	ENST00000553055	SPAG11A	Q6PDA7	123 aa		3.45	□□□□□ -1.86
PFKM-231	ENST00000553055		Q6ZRX8	168 aa		3.45	□□□□□ -1.86
PFKM-231	ENST00000553055	SPRR1A	P35321	89 aa		3.43	□□□□□ -1.86
PFKM-231	ENST00000553055	KRTAP13-4	Q3LI77	160 aa		3.43	□□□□□ -1.86
PFKM-231	ENST00000553055		K7EQZ3	153 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	KRTAP12-2	P59991	146 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	KRTAP10-8	P60410	259 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	PP632	Q6XCG6	107 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	DEFB105A	Q8NG35	78 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	LINC00208	Q96KT6	92 aa		3.42	□□□□□ -1.86
PFKM-231	ENST00000553055	HTN3	P15516	51 aa		3.41	□□□□□ -1.86
PFKM-231	ENST00000553055	KRTAP10-1	P60331	282 aa		3.41	□□□□□ -1.86
PFKM-231	ENST00000553055	LINC01556	Q5JQF7	62 aa		3.41	□□□□□ -1.86
PFKM-231	ENST00000553055	KRTAP13-3	Q3SY46	172 aa		3.4	□□□□□ -1.87
PFKM-231	ENST00000553055	UBE2DNL	Q8IWF7	75 aa		3.4	□□□□□ -1.87
PFKM-231	ENST00000553055		H0Y9P7	68 aa		3.39	□□□□□ -1.87
PFKM-231	ENST00000553055	DEFB4A	O15263	64 aa		3.39	□□□□□ -1.87
PFKM-231	ENST00000553055	LCE3E	Q5T5B0	92 aa		3.39	□□□□□ -1.87
PFKM-231	ENST00000553055	WFDC10B	Q8IUB3	73 aa		3.39	□□□□□ -1.87
PFKM-231	ENST00000553055	MT1HL1	P0DM35	61 aa		3.38	□□□□□ -1.87
PFKM-231	ENST00000553055	WFDC13	Q8IUB5	93 aa		3.38	□□□□□ -1.87
PFKM-231	ENST00000553055	PRR15L	Q9BU68	103 aa		3.38	□□□□□ -1.87
PFKM-231	ENST00000553055	FAT3	Q8TDW7	4589 aa		3.37	□□□□□ -1.87
PFKM-231	ENST00000553055	DEFB131B	A0A096LNP1	70 aa		3.35	□□□□□ -1.87
PFKM-231	ENST00000553055	KRTAP10-4	P60372	401 aa	Predicted RBP	3.35	□□□□□ -1.87
PFKM-231	ENST00000553055	TP53AIP1	Q9HCN2	124 aa		3.35	□□□□□ -1.87
PFKM-231	ENST00000553055	LINC01558	Q9Y6Z2	57 aa		3.35	□□□□□ -1.87
PFKM-231	ENST00000553055	TNXB	P22105	4242 aa		3.35	□□□□□ -1.87
PFKM-231	ENST00000553055	SPRR1B	P22528	89 aa		3.33	□□□□□ -1.88
PFKM-231	ENST00000553055	PLAC8	Q9NZF1	115 aa		3.32	□□□□□ -1.88
PFKM-231	ENST00000553055		A0A087WTM6	91 aa		3.31	□□□□□ -1.88
PFKM-231	ENST00000553055	MMP24-AS1	A0A0U1RRL7	71 aa		3.31	□□□□□ -1.88
PFKM-231	ENST00000553055	KRTAP10-5	P60370	271 aa		3.31	□□□□□ -1.88
PFKM-231	ENST00000553055	LINC00472	Q9H8W2	130 aa		3.31	□□□□□ -1.88
PFKM-231	ENST00000553055	UQCR11	O14957	56 aa		3.28	□□□□□ -1.88
PFKM-231	ENST00000553055	PCOTH	Q58A44	107 aa		3.28	□□□□□ -1.88
PFKM-231	ENST00000553055	PRLH	P81277	87 aa		3.27	□□□□□ -1.89
PFKM-231	ENST00000553055		A0A096LNI7	61 aa		3.24	□□□□□ -1.89
PFKM-231	ENST00000553055		Q96NJ1	140 aa		3.24	□□□□□ -1.89
PFKM-231	ENST00000553055	MRPL34	Q9BQ48	92 aa	Known RBP	3.24	□□□□□ -1.89
PFKM-231	ENST00000553055	LPA	P08519	4548 aa		3.23	□□□□□ -1.89
PFKM-231	ENST00000553055		Q6ZSA8	131 aa		3.23	□□□□□ -1.89
PFKM-231	ENST00000553055	ACYP2	P14621	99 aa		3.22	□□□□□ -1.89
PFKM-231	ENST00000553055	SPINK7	P58062	85 aa		3.22	□□□□□ -1.89
PFKM-231	ENST00000553055	KRTAP13-1	Q8IUC0	172 aa		3.2	□□□□□ -1.9
PFKM-231	ENST00000553055	DNAH8	Q96JB1	4490 aa		3.18	□□□□□ -1.9
PFKM-231	ENST00000553055	KRTAP10-10	P60014	251 aa		3.18	□□□□□ -1.9
PFKM-231	ENST00000553055		A0A1B0GU69	56 aa		3.17	□□□□□ -1.9
PFKM-231	ENST00000553055	KRTAP12-1	P59990	96 aa		3.17	□□□□□ -1.9
PFKM-231	ENST00000553055	KRTAP10-7	P60409	375 aa	Predicted RBP	3.17	□□□□□ -1.9
PFKM-231	ENST00000553055	SPATA8	Q6RVD6	105 aa		3.17	□□□□□ -1.9
PFKM-231	ENST00000553055	LCE1E	Q5T753	118 aa		3.14	□□□□□ -1.91
PFKM-231	ENST00000553055	SSPO	A2VEC9	5147 aa		3.14	□□□□□ -1.91
PFKM-231	ENST00000553055	SYNE2	Q8WXH0	6885 aa	Known RBP	3.13	□□□□□ -1.91
PFKM-231	ENST00000553055	PLAC4	Q8WY50	150 aa		3.1	□□□□□ -1.91
PFKM-231	ENST00000553055	SSBP3-AS1	Q7Z2R9	100 aa		3.08	□□□□□ -1.92
PFKM-231	ENST00000553055	SPINK6	Q6UWN8	80 aa		3.07	□□□□□ -1.92
PFKM-231	ENST00000553055	LCE3D	Q9BYE3	92 aa		3.06	□□□□□ -1.92
PFKM-231	ENST00000553055	NEB	P20929	6669 aa		3.05	□□□□□ -1.92
PFKM-231	ENST00000553055	MACF1	Q9UPN3	7388 aa	Known RBP	3.04	□□□□□ -1.92
PFKM-231	ENST00000553055	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.03	□□□□□ -1.92
PFKM-231	ENST00000553055	KRTAP6-3	Q3LI67	103 aa		3.03	□□□□□ -1.92
PFKM-231	ENST00000553055	USH2A	O75445	5202 aa		3.02	□□□□□ -1.93
PFKM-231	ENST00000553055	RPL37	P61927	97 aa	Known RBP	3.01	□□□□□ -1.93
PFKM-231	ENST00000553055	KRTAP20-1	Q3LI63	56 aa		3.01	□□□□□ -1.93
PFKM-231	ENST00000553055		H0YAA0	97 aa		2.95	□□□□□ -1.94
PFKM-231	ENST00000553055	SPINK1	P00995	79 aa		2.94	□□□□□ -1.94
PFKM-231	ENST00000553055	RPS29	P62273	56 aa	Known RBP	2.94	□□□□□ -1.94
PFKM-231	ENST00000553055	H1FX-AS1	Q4G0G2	97 aa		2.94	□□□□□ -1.94

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