RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
USP44-208ENST00000552440 PKHD1P08F94 4074 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 DNAH10Q8IVF4 4471 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 LYNX1G3V0Z9 82 aa1.61□□□□□ -2.15
USP44-208ENST00000552440 COX6A2Q02221 97 aa1.6□□□□□ -2.15
USP44-208ENST00000552440 COX6B2Q6YFQ2 88 aa1.6□□□□□ -2.15
USP44-208ENST00000552440 DMBT1Q9UGM3 2413 aaPredicted RBP1.6□□□□□ -2.15
USP44-208ENST00000552440 HMCN2Q8NDA2 5059 aa1.6□□□□□ -2.15
USP44-208ENST00000552440 HSPG2P98160 4391 aa1.59□□□□□ -2.15
USP44-208ENST00000552440 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
USP44-208ENST00000552440 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.15
USP44-208ENST00000552440 MUC2Q02817 5179 aa1.59□□□□□ -2.16
USP44-208ENST00000552440 SRRM2Q9UQ35 2752 aaKnown RBP1.58□□□□□ -2.16
USP44-208ENST00000552440 CCL22O00626 93 aa1.58□□□□□ -2.16
USP44-208ENST00000552440 LINC00158P58513 81 aa1.58□□□□□ -2.16
USP44-208ENST00000552440 SNRPGP62308 76 aaKnown RBP1.58□□□□□ -2.16
USP44-208ENST00000552440 TIMM8BQ9Y5J9 83 aaPredicted RBP1.58□□□□□ -2.16
USP44-208ENST00000552440 NDUFA3O95167 84 aa1.57□□□□□ -2.16
USP44-208ENST00000552440 Q8IZM0 81 aa1.57□□□□□ -2.16
USP44-208ENST00000552440 PRO0255Q9UI72 69 aa1.57□□□□□ -2.16
USP44-208ENST00000552440 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
USP44-208ENST00000552440 SPINK4O60575 86 aa1.56□□□□□ -2.16
USP44-208ENST00000552440 VPS13DQ5THJ4 4388 aa1.56□□□□□ -2.16
USP44-208ENST00000552440 FAT2Q9NYQ8 4349 aa1.56□□□□□ -2.16
USP44-208ENST00000552440 DNAH11Q96DT5 4516 aa1.56□□□□□ -2.16
USP44-208ENST00000552440 Q6ZSA8 131 aa1.56□□□□□ -2.16
USP44-208ENST00000552440 DNAH2Q9P225 4427 aa1.55□□□□□ -2.16
USP44-208ENST00000552440 MYCBP2O75592 4640 aa1.55□□□□□ -2.16
USP44-208ENST00000552440 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
USP44-208ENST00000552440 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
USP44-208ENST00000552440 PKD1P98161 4303 aa1.54□□□□□ -2.16
USP44-208ENST00000552440 APOBP04114 4563 aaKnown RBP1.53□□□□□ -2.16
USP44-208ENST00000552440 FSIP2Q5CZC0 6907 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 DNAH17Q9UFH2 4485 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 DNAH6Q9C0G6 4158 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 H0YAA0 97 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 LELP1Q5T871 98 aa1.52□□□□□ -2.17
USP44-208ENST00000552440 A0A0D9SG42 100 aa1.51□□□□□ -2.17
USP44-208ENST00000552440 H3BUX3 64 aa1.51□□□□□ -2.17
USP44-208ENST00000552440 SPRR1AP35321 89 aa1.51□□□□□ -2.17
USP44-208ENST00000552440 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
USP44-208ENST00000552440 LINC00308Q8TCZ7 52 aa1.5□□□□□ -2.17
USP44-208ENST00000552440 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
USP44-208ENST00000552440 SORL1Q92673 2214 aa1.5□□□□□ -2.17
USP44-208ENST00000552440 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
USP44-208ENST00000552440 Q5VSD8 79 aa1.5□□□□□ -2.17
USP44-208ENST00000552440 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
USP44-208ENST00000552440 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
USP44-208ENST00000552440 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
USP44-208ENST00000552440 APLNQ9ULZ1 77 aa1.48□□□□□ -2.17
USP44-208ENST00000552440 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
USP44-208ENST00000552440 LRP2P98164 4655 aa1.47□□□□□ -2.17
USP44-208ENST00000552440 MINOS1Q5TGZ0 78 aa1.47□□□□□ -2.17
USP44-208ENST00000552440 KAAG1Q9UBP8 84 aa1.47□□□□□ -2.17
USP44-208ENST00000552440 FAT1Q14517 4588 aa1.47□□□□□ -2.17
USP44-208ENST00000552440 DEFB105AQ8NG35 78 aa1.46□□□□□ -2.18
USP44-208ENST00000552440 SPRR1BP22528 89 aa1.45□□□□□ -2.18
USP44-208ENST00000552440 PRB3Q04118 309 aaPredicted RBP1.45□□□□□ -2.18
USP44-208ENST00000552440 WFDC13Q8IUB5 93 aa1.45□□□□□ -2.18
USP44-208ENST00000552440 H3BSH0 61 aa1.44□□□□□ -2.18
USP44-208ENST00000552440 KRTAP10-4P60372 401 aaPredicted RBP1.44□□□□□ -2.18
USP44-208ENST00000552440 C6orf48Q9UBA6 75 aa1.44□□□□□ -2.18
USP44-208ENST00000552440 DEFB136Q30KP8 78 aa1.43□□□□□ -2.18
USP44-208ENST00000552440 DEFB104AQ8WTQ1 72 aa1.43□□□□□ -2.18
USP44-208ENST00000552440 PKHD1L1Q86WI1 4243 aa1.43□□□□□ -2.18
USP44-208ENST00000552440 LRP1Q07954 4544 aaKnown RBP1.41□□□□□ -2.18
USP44-208ENST00000552440 IAPPP10997 89 aa1.41□□□□□ -2.18
USP44-208ENST00000552440 DEFB130BP0DP73 79 aa1.4□□□□□ -2.18
USP44-208ENST00000552440 DEFB130AP0DP74 79 aa1.4□□□□□ -2.18
USP44-208ENST00000552440 SMIM2Q9BVW6 85 aa1.4□□□□□ -2.18
USP44-208ENST00000552440 SMR3BP02814 79 aaPredicted RBP1.4□□□□□ -2.19
USP44-208ENST00000552440 TNXBP22105 4242 aa1.39□□□□□ -2.19
USP44-208ENST00000552440 FAT3Q8TDW7 4589 aa1.39□□□□□ -2.19
USP44-208ENST00000552440 KLK9Q2XQG4 91 aa1.38□□□□□ -2.19
USP44-208ENST00000552440 RPS27P42677 84 aaKnown RBP1.38□□□□□ -2.19
USP44-208ENST00000552440 RPS27LQ71UM5 84 aaKnown RBP1.38□□□□□ -2.19
USP44-208ENST00000552440 DEFB135Q30KP9 77 aa1.37□□□□□ -2.19
USP44-208ENST00000552440 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
USP44-208ENST00000552440 NDUFA1O15239 70 aa1.36□□□□□ -2.19
USP44-208ENST00000552440 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
USP44-208ENST00000552440 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
USP44-208ENST00000552440 DEFB4AO15263 64 aa1.33□□□□□ -2.2
USP44-208ENST00000552440 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
USP44-208ENST00000552440 LPAP08519 4548 aa1.32□□□□□ -2.2
USP44-208ENST00000552440 H3BUA1 57 aa1.32□□□□□ -2.2
USP44-208ENST00000552440 WT1-ASQ06250 92 aa1.31□□□□□ -2.2
USP44-208ENST00000552440 ARHGAP5-AS1Q96IT6 56 aa1.31□□□□□ -2.2
USP44-208ENST00000552440 DNAH8Q96JB1 4490 aa1.3□□□□□ -2.2
USP44-208ENST00000552440 SPART-AS1P0CW21 52 aa1.3□□□□□ -2.2
USP44-208ENST00000552440 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
USP44-208ENST00000552440 WFDC10BQ8IUB3 73 aa1.29□□□□□ -2.2
USP44-208ENST00000552440 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
USP44-208ENST00000552440 USH2AO75445 5202 aa1.28□□□□□ -2.2
USP44-208ENST00000552440 LEAP2Q969E1 77 aa1.27□□□□□ -2.21
USP44-208ENST00000552440 TTTY10Q9BZA0 68 aa1.26□□□□□ -2.21
USP44-208ENST00000552440 NEBP20929 6669 aa1.26□□□□□ -2.21
USP44-208ENST00000552440 LINC01590Q5TEZ4 76 aa1.26□□□□□ -2.21
USP44-208ENST00000552440 HTN3P15516 51 aa1.25□□□□□ -2.21
USP44-208ENST00000552440 H3BNG1 76 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms