RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 S100A13Q99584 98 aa-1.79□□□□□ -2.7
GPN3-209ENST00000551079 SMG1Q96Q15 3661 aaKnown RBP-1.79□□□□□ -2.7
GPN3-209ENST00000551079 MT1GP13640 62 aa-1.8□□□□□ -2.7
GPN3-209ENST00000551079 GNG2P59768 71 aa-1.8□□□□□ -2.7
GPN3-209ENST00000551079 ABCC6O95255 1503 aa-1.81□□□□□ -2.7
GPN3-209ENST00000551079 C18orf32Q8TCD1 76 aa-1.81□□□□□ -2.7
GPN3-209ENST00000551079 ABCA8O94911 1581 aa-1.81□□□□□ -2.7
GPN3-209ENST00000551079 MROH1Q8NDA8 1641 aa-1.83□□□□□ -2.7
GPN3-209ENST00000551079 CDC42BPGQ6DT37 1551 aa-1.83□□□□□ -2.7
GPN3-209ENST00000551079 H3BUA1 57 aa-1.83□□□□□ -2.7
GPN3-209ENST00000551079 NOP10Q9NPE3 64 aaKnown RBP-1.83□□□□□ -2.7
GPN3-209ENST00000551079 KRTAP19-6Q3LI70 58 aa-1.85□□□□□ -2.71
GPN3-209ENST00000551079 TLN1Q9Y490 2541 aaKnown RBP-1.85□□□□□ -2.71
GPN3-209ENST00000551079 SMARCA2P51531 1590 aa-1.85□□□□□ -2.71
GPN3-209ENST00000551079 RB1CC1Q8TDY2 1594 aa-1.85□□□□□ -2.71
GPN3-209ENST00000551079 DNMBPQ6XZF7 1577 aa-1.86□□□□□ -2.71
GPN3-209ENST00000551079 DMXL2Q8TDJ6 3036 aa-1.86□□□□□ -2.71
GPN3-209ENST00000551079 CLASP1Q7Z460 1538 aa-1.86□□□□□ -2.71
GPN3-209ENST00000551079 IQGAP3Q86VI3 1631 aa-1.87□□□□□ -2.71
GPN3-209ENST00000551079 MT1MQ8N339 61 aa-1.87□□□□□ -2.71
GPN3-209ENST00000551079 CCDC18Q5T9S5 1454 aa-1.88□□□□□ -2.71
GPN3-209ENST00000551079 MT2AP02795 61 aa-1.88□□□□□ -2.71
GPN3-209ENST00000551079 HILPDAQ9Y5L2 63 aa-1.88□□□□□ -2.71
GPN3-209ENST00000551079 CROCC2H7BZ55 1655 aa-1.89□□□□□ -2.71
GPN3-209ENST00000551079 ANKARQ7Z5J8 1434 aa-1.89□□□□□ -2.71
GPN3-209ENST00000551079 DEFB114Q30KQ6 69 aa-1.89□□□□□ -2.71
GPN3-209ENST00000551079 ABCA9Q8IUA7 1624 aa-1.89□□□□□ -2.71
GPN3-209ENST00000551079 M0QY20 66 aa-1.9□□□□□ -2.71
GPN3-209ENST00000551079 CSMD2Q7Z408 3487 aa-1.91□□□□□ -2.72
GPN3-209ENST00000551079 RRBP1Q9P2E9 1410 aaKnown RBP-1.92□□□□□ -2.72
GPN3-209ENST00000551079 FAM208AQ9UK61 1670 aaKnown RBP-1.93□□□□□ -2.72
GPN3-209ENST00000551079 MADDQ8WXG6 1647 aa-1.93□□□□□ -2.72
GPN3-209ENST00000551079 ATMQ13315 3056 aa-1.94□□□□□ -2.72
GPN3-209ENST00000551079 M0QZ58 72 aa-1.94□□□□□ -2.72
GPN3-209ENST00000551079 ATXN8Q156A1 80 aa-1.94□□□□□ -2.72
GPN3-209ENST00000551079 TIAM1Q13009 1591 aa-1.94□□□□□ -2.72
GPN3-209ENST00000551079 LINC01546A6NGU7 62 aa-1.96□□□□□ -2.72
GPN3-209ENST00000551079 GLI2P10070 1586 aa-1.97□□□□□ -2.72
GPN3-209ENST00000551079 KAAG1Q9UBP8 84 aa-1.97□□□□□ -2.72
GPN3-209ENST00000551079 GNG13Q9P2W3 67 aa-2.01□□□□□ -2.73
GPN3-209ENST00000551079 ZFHX4Q86UP3 3567 aa-2.01□□□□□ -2.73
GPN3-209ENST00000551079 UGGT2Q9NYU1 1516 aa-2.01□□□□□ -2.73
GPN3-209ENST00000551079 BOD1L1Q8NFC6 3051 aa-2.02□□□□□ -2.73
GPN3-209ENST00000551079 ALS2Q96Q42 1657 aa-2.02□□□□□ -2.73
GPN3-209ENST00000551079 A8MTW9 85 aa-2.02□□□□□ -2.73
GPN3-209ENST00000551079 CRYBG3Q68DQ2 2970 aa-2.03□□□□□ -2.73
GPN3-209ENST00000551079 SPART-AS1P0CW21 52 aa-2.03□□□□□ -2.73
GPN3-209ENST00000551079 LINC01549A6NIU2 74 aa-2.04□□□□□ -2.74
GPN3-209ENST00000551079 DEFB4AO15263 64 aa-2.04□□□□□ -2.74
GPN3-209ENST00000551079 PREX2Q70Z35 1606 aa-2.04□□□□□ -2.74
GPN3-209ENST00000551079 M0R1W7 72 aa-2.05□□□□□ -2.74
GPN3-209ENST00000551079 MYO15AQ9UKN7 3530 aa-2.05□□□□□ -2.74
GPN3-209ENST00000551079 ABRACLQ9P1F3 81 aa-2.06□□□□□ -2.74
GPN3-209ENST00000551079 CFAP54Q96N23 3096 aa-2.08□□□□□ -2.74
GPN3-209ENST00000551079 KIF21BO75037 1637 aa-2.09□□□□□ -2.74
GPN3-209ENST00000551079 K7EMI3 77 aa-2.09□□□□□ -2.74
GPN3-209ENST00000551079 LINC00308Q8TCZ7 52 aa-2.09□□□□□ -2.74
GPN3-209ENST00000551079 DUOX2Q9NRD8 1548 aa-2.09□□□□□ -2.74
GPN3-209ENST00000551079 PRUNE2Q8WUY3 3088 aa-2.1□□□□□ -2.75
GPN3-209ENST00000551079 WFDC10BQ8IUB3 73 aa-2.1□□□□□ -2.75
GPN3-209ENST00000551079 EEA1Q15075 1411 aa-2.11□□□□□ -2.75
GPN3-209ENST00000551079 FREM2Q5SZK8 3169 aa-2.12□□□□□ -2.75
GPN3-209ENST00000551079 EFCAB6Q5THR3 1501 aa-2.12□□□□□ -2.75
GPN3-209ENST00000551079 ABCA6Q8N139 1617 aa-2.13□□□□□ -2.75
GPN3-209ENST00000551079 SMIM27A0A1W2PRY6 76 aa-2.13□□□□□ -2.75
GPN3-209ENST00000551079 VPS13CQ709C8 3753 aa-2.14□□□□□ -2.75
GPN3-209ENST00000551079 MT1FP04733 61 aa-2.16□□□□□ -2.76
GPN3-209ENST00000551079 TMEM167BQ9NRX6 74 aa-2.16□□□□□ -2.76
GPN3-209ENST00000551079 IGIPA6NJ69 53 aa-2.17□□□□□ -2.76
GPN3-209ENST00000551079 LEAP2Q969E1 77 aa-2.18□□□□□ -2.76
GPN3-209ENST00000551079 SMCO4Q9NRQ5 59 aa-2.19□□□□□ -2.76
GPN3-209ENST00000551079 LMO7Q8WWI1 1683 aa-2.2□□□□□ -2.76
GPN3-209ENST00000551079 CENPEQ02224 2701 aa-2.2□□□□□ -2.76
GPN3-209ENST00000551079 POLR2KP53803 58 aaKnown RBP-2.22□□□□□ -2.76
GPN3-209ENST00000551079 PDCD5O14737 125 aa-2.23□□□□□ -2.77
GPN3-209ENST00000551079 RPS29P62273 56 aaKnown RBP-2.24□□□□□ -2.77
GPN3-209ENST00000551079 NMES1Q9C002 83 aa-2.24□□□□□ -2.77
GPN3-209ENST00000551079 UGGT1Q9NYU2 1555 aa-2.25□□□□□ -2.77
GPN3-209ENST00000551079 CCDC180Q9P1Z9 1646 aa-2.25□□□□□ -2.77
GPN3-209ENST00000551079 SERF2P84101 59 aa-2.28□□□□□ -2.77
GPN3-209ENST00000551079 FRYLO94915 3013 aa-2.28□□□□□ -2.77
GPN3-209ENST00000551079 EFCAB5A4FU69 1503 aa-2.28□□□□□ -2.77
GPN3-209ENST00000551079 DEFB136Q30KP8 78 aa-2.29□□□□□ -2.78
GPN3-209ENST00000551079 PCNTO95613 3336 aa-2.3□□□□□ -2.78
GPN3-209ENST00000551079 SYCP2Q9BX26 1530 aa-2.31□□□□□ -2.78
GPN3-209ENST00000551079 TFF3Q07654 80 aa-2.31□□□□□ -2.78
GPN3-209ENST00000551079 WDFY3Q8IZQ1 3526 aa-2.31□□□□□ -2.78
GPN3-209ENST00000551079 MROH2AA6NES4 1674 aa-2.33□□□□□ -2.78
GPN3-209ENST00000551079 CEP250Q9BV73 2442 aa-2.34□□□□□ -2.78
GPN3-209ENST00000551079 AGLP35573 1532 aa-2.35□□□□□ -2.79
GPN3-209ENST00000551079 H0YGX0 51 aa-2.36□□□□□ -2.79
GPN3-209ENST00000551079 DEFB131AP59861 70 aa-2.36□□□□□ -2.79
GPN3-209ENST00000551079 CPS1P31327 1500 aa-2.37□□□□□ -2.79
GPN3-209ENST00000551079 DMDP11532 3685 aa-2.37□□□□□ -2.79
GPN3-209ENST00000551079 CEP350Q5VT06 3117 aa-2.37□□□□□ -2.79
GPN3-209ENST00000551079 SPEGQ15772 3267 aa-2.38□□□□□ -2.79
GPN3-209ENST00000551079 ABCA10Q8WWZ4 1543 aa-2.38□□□□□ -2.79
GPN3-209ENST00000551079 DDX60Q8IY21 1712 aaKnown RBP-2.4□□□□□ -2.79
GPN3-209ENST00000551079 IQGAP1P46940 1657 aa-2.43□□□□□ -2.8
GPN3-209ENST00000551079 A0A087WWC5 75 aa-2.43□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms