RNA–Protein interactions for RNA: ENST00000550977.2

CFAP54-203, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 5

Gene CFAP54, Length 2,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-203ENST00000550977 KRTAP19-1Q8IUB9 90 aa2.98□□□□□ -1.93
CFAP54-203ENST00000550977 OTOGQ6ZRI0 2925 aa2.98□□□□□ -1.93
CFAP54-203ENST00000550977 ITPR2Q14571 2701 aa2.97□□□□□ -1.93
CFAP54-203ENST00000550977 BAHCC1Q9P281 2608 aa2.97□□□□□ -1.93
CFAP54-203ENST00000550977 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
CFAP54-203ENST00000550977 FBN1P35555 2871 aaKnown RBP2.96□□□□□ -1.94
CFAP54-203ENST00000550977 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CFAP54-203ENST00000550977 SEC61BP60468 96 aaKnown RBP2.95□□□□□ -1.94
CFAP54-203ENST00000550977 ATRQ13535 2644 aa2.95□□□□□ -1.94
CFAP54-203ENST00000550977 PKD1L1Q8TDX9 2849 aa2.95□□□□□ -1.94
CFAP54-203ENST00000550977 HELZ2Q9BYK8 2649 aaKnown RBP2.95□□□□□ -1.94
CFAP54-203ENST00000550977 DNAH5Q8TE73 4624 aa2.94□□□□□ -1.94
CFAP54-203ENST00000550977 KRTAP21-3Q3LHN1 58 aa2.94□□□□□ -1.94
CFAP54-203ENST00000550977 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
CFAP54-203ENST00000550977 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
CFAP54-203ENST00000550977 FASNP49327 2511 aaKnown RBP2.92□□□□□ -1.94
CFAP54-203ENST00000550977 SRRM2Q9UQ35 2752 aaKnown RBP2.91□□□□□ -1.94
CFAP54-203ENST00000550977 KRTAP10-8P60410 259 aa2.9□□□□□ -1.94
CFAP54-203ENST00000550977 FLNBO75369 2602 aaKnown RBP2.9□□□□□ -1.94
CFAP54-203ENST00000550977 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
CFAP54-203ENST00000550977 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
CFAP54-203ENST00000550977 A0A1B0GVY2 172 aa2.88□□□□□ -1.95
CFAP54-203ENST00000550977 APOBP04114 4563 aaKnown RBP2.88□□□□□ -1.95
CFAP54-203ENST00000550977 A0A0D9SG42 100 aa2.87□□□□□ -1.95
CFAP54-203ENST00000550977 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
CFAP54-203ENST00000550977 PKD1P98161 4303 aa2.87□□□□□ -1.95
CFAP54-203ENST00000550977 TNXBP22105 4242 aa2.86□□□□□ -1.95
CFAP54-203ENST00000550977 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
CFAP54-203ENST00000550977 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
CFAP54-203ENST00000550977 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
CFAP54-203ENST00000550977 STARD9Q9P2P6 4700 aa2.86□□□□□ -1.95
CFAP54-203ENST00000550977 HSPG2P98160 4391 aa2.85□□□□□ -1.95
CFAP54-203ENST00000550977 FBN3Q75N90 2809 aa2.84□□□□□ -1.95
CFAP54-203ENST00000550977 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
CFAP54-203ENST00000550977 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
CFAP54-203ENST00000550977 MEGF8Q7Z7M0 2845 aa2.83□□□□□ -1.96
CFAP54-203ENST00000550977 KRTAP19-4Q3LI73 84 aa2.83□□□□□ -1.96
CFAP54-203ENST00000550977 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
CFAP54-203ENST00000550977 TGP01266 2768 aa2.82□□□□□ -1.96
CFAP54-203ENST00000550977 CSMD3Q7Z407 3707 aa2.81□□□□□ -1.96
CFAP54-203ENST00000550977 STAB2Q8WWQ8 2551 aa2.81□□□□□ -1.96
CFAP54-203ENST00000550977 NBEAL1Q6ZS30 2694 aa2.8□□□□□ -1.96
CFAP54-203ENST00000550977 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
CFAP54-203ENST00000550977 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
CFAP54-203ENST00000550977 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
CFAP54-203ENST00000550977 KMT2AQ03164 3969 aa2.78□□□□□ -1.96
CFAP54-203ENST00000550977 FAT1Q14517 4588 aa2.78□□□□□ -1.96
CFAP54-203ENST00000550977 FAT3Q8TDW7 4589 aa2.76□□□□□ -1.97
CFAP54-203ENST00000550977 VPS13BQ7Z7G8 4022 aa2.76□□□□□ -1.97
CFAP54-203ENST00000550977 COL6A5A8TX70 2615 aa2.76□□□□□ -1.97
CFAP54-203ENST00000550977 R4GN34 69 aa2.76□□□□□ -1.97
CFAP54-203ENST00000550977 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
CFAP54-203ENST00000550977 STAB1Q9NY15 2570 aa2.74□□□□□ -1.97
CFAP54-203ENST00000550977 FLG2Q5D862 2391 aaPredicted RBP2.73□□□□□ -1.97
CFAP54-203ENST00000550977 INE1O15225 51 aa2.72□□□□□ -1.97
CFAP54-203ENST00000550977 MGAM2Q2M2H8 2515 aa2.72□□□□□ -1.97
CFAP54-203ENST00000550977 PRO2289Q9P1D8 64 aa2.71□□□□□ -1.98
CFAP54-203ENST00000550977 NOTCH1P46531 2555 aa2.7□□□□□ -1.98
CFAP54-203ENST00000550977 TNP1P09430 55 aa2.7□□□□□ -1.98
CFAP54-203ENST00000550977 Q5VSD8 79 aa2.69□□□□□ -1.98
CFAP54-203ENST00000550977 SMR3BP02814 79 aaPredicted RBP2.69□□□□□ -1.98
CFAP54-203ENST00000550977 DNHD1Q96M86 4753 aa2.69□□□□□ -1.98
CFAP54-203ENST00000550977 MYCBP2O75592 4640 aa2.68□□□□□ -1.98
CFAP54-203ENST00000550977 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
CFAP54-203ENST00000550977 KRTAP9-7A8MTY7 169 aa2.65□□□□□ -1.99
CFAP54-203ENST00000550977 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
CFAP54-203ENST00000550977 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
CFAP54-203ENST00000550977 MUC17Q685J3 4493 aa2.58□□□□□ -2
CFAP54-203ENST00000550977 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
CFAP54-203ENST00000550977 HERC1Q15751 4861 aa2.56□□□□□ -2
CFAP54-203ENST00000550977 KRTAP5-9P26371 169 aa2.55□□□□□ -2
CFAP54-203ENST00000550977 DMBT1Q9UGM3 2413 aaPredicted RBP2.54□□□□□ -2
CFAP54-203ENST00000550977 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
CFAP54-203ENST00000550977 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CFAP54-203ENST00000550977 RYR2Q92736 4967 aa2.52□□□□□ -2.01
CFAP54-203ENST00000550977 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
CFAP54-203ENST00000550977 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
CFAP54-203ENST00000550977 RYR1P21817 5038 aa2.44□□□□□ -2.02
CFAP54-203ENST00000550977 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
CFAP54-203ENST00000550977 KRTAP19-8Q3LI54 63 aa2.41□□□□□ -2.02
CFAP54-203ENST00000550977 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
CFAP54-203ENST00000550977 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
CFAP54-203ENST00000550977 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
CFAP54-203ENST00000550977 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
CFAP54-203ENST00000550977 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
CFAP54-203ENST00000550977 RYR3Q15413 4870 aa2.3□□□□□ -2.04
CFAP54-203ENST00000550977 LRP2P98164 4655 aa2.29□□□□□ -2.04
CFAP54-203ENST00000550977 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CFAP54-203ENST00000550977 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.04
CFAP54-203ENST00000550977 KMT2CQ8NEZ4 4911 aaKnown RBP2.28□□□□□ -2.04
CFAP54-203ENST00000550977 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
CFAP54-203ENST00000550977 MT1XP80297 61 aa2.24□□□□□ -2.05
CFAP54-203ENST00000550977 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
CFAP54-203ENST00000550977 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
CFAP54-203ENST00000550977 LPAP08519 4548 aa2.23□□□□□ -2.05
CFAP54-203ENST00000550977 LCE3CQ5T5A8 94 aa2.22□□□□□ -2.05
CFAP54-203ENST00000550977 MT2AP02795 61 aa2.22□□□□□ -2.05
CFAP54-203ENST00000550977 MT1BP07438 61 aa2.22□□□□□ -2.05
CFAP54-203ENST00000550977 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
CFAP54-203ENST00000550977 MT1HP80294 61 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms