RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 ENHOQ6UWT2 76 aa1.78□□□□□ -2.12
LETMD1-226ENST00000550755 SPART-AS1P0CW21 52 aa1.77□□□□□ -2.13
LETMD1-226ENST00000550755 DEFB130BP0DP73 79 aa1.77□□□□□ -2.13
LETMD1-226ENST00000550755 DEFB130AP0DP74 79 aa1.77□□□□□ -2.13
LETMD1-226ENST00000550755 TP53AIP1Q9HCN2 124 aa1.77□□□□□ -2.13
LETMD1-226ENST00000550755 ANK2Q01484 3957 aa1.77□□□□□ -2.13
LETMD1-226ENST00000550755 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 DNAH9Q9NYC9 4486 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 A0A096LPF7 62 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 H0YGX0 51 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 LINC00158P58513 81 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 TOMM7Q9P0U1 55 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 MAST4O15021 2626 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 STAB1Q9NY15 2570 aa1.76□□□□□ -2.13
LETMD1-226ENST00000550755 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
LETMD1-226ENST00000550755 NBEAL2Q6ZNJ1 2754 aa1.75□□□□□ -2.13
LETMD1-226ENST00000550755 KRTAP21-3Q3LHN1 58 aa1.75□□□□□ -2.13
LETMD1-226ENST00000550755 CLPSL2Q6UWE3 100 aa1.75□□□□□ -2.13
LETMD1-226ENST00000550755 UBL5Q9BZL1 73 aa1.75□□□□□ -2.13
LETMD1-226ENST00000550755 FLNBO75369 2602 aaKnown RBP1.74□□□□□ -2.13
LETMD1-226ENST00000550755 DEFB4AO15263 64 aa1.74□□□□□ -2.13
LETMD1-226ENST00000550755 LINC01556Q5JQF7 62 aa1.74□□□□□ -2.13
LETMD1-226ENST00000550755 NOTCH1P46531 2555 aa1.74□□□□□ -2.13
LETMD1-226ENST00000550755 WFDC10BQ8IUB3 73 aa1.73□□□□□ -2.13
LETMD1-226ENST00000550755 C6orf48Q9UBA6 75 aa1.73□□□□□ -2.13
LETMD1-226ENST00000550755 NBEAL1Q6ZS30 2694 aa1.73□□□□□ -2.13
LETMD1-226ENST00000550755 STAB2Q8WWQ8 2551 aa1.72□□□□□ -2.13
LETMD1-226ENST00000550755 HTN3P15516 51 aa1.72□□□□□ -2.13
LETMD1-226ENST00000550755 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
LETMD1-226ENST00000550755 MGAM2Q2M2H8 2515 aa1.72□□□□□ -2.13
LETMD1-226ENST00000550755 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
LETMD1-226ENST00000550755 COL6A5A8TX70 2615 aa1.71□□□□□ -2.13
LETMD1-226ENST00000550755 VPS13DQ5THJ4 4388 aa1.71□□□□□ -2.14
LETMD1-226ENST00000550755 DEFB131BA0A096LNP1 70 aa1.71□□□□□ -2.14
LETMD1-226ENST00000550755 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
LETMD1-226ENST00000550755 PKD1L1Q8TDX9 2849 aa1.7□□□□□ -2.14
LETMD1-226ENST00000550755 SPRR1AP35321 89 aa1.7□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH10Q8IVF4 4471 aa1.7□□□□□ -2.14
LETMD1-226ENST00000550755 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
LETMD1-226ENST00000550755 KCNQ1DNQ9H478 68 aa1.69□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH6Q9C0G6 4158 aa1.68□□□□□ -2.14
LETMD1-226ENST00000550755 IGLV5-48A0A075B6I7 105 aa1.68□□□□□ -2.14
LETMD1-226ENST00000550755 K7EQZ3 153 aa1.68□□□□□ -2.14
LETMD1-226ENST00000550755 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH2Q9P225 4427 aa1.67□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH7Q8WXX0 4024 aa1.67□□□□□ -2.14
LETMD1-226ENST00000550755 A0A0D9SG42 100 aa1.66□□□□□ -2.14
LETMD1-226ENST00000550755 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
LETMD1-226ENST00000550755 DNAH8Q96JB1 4490 aa1.66□□□□□ -2.14
LETMD1-226ENST00000550755 LYSTQ99698 3801 aa1.65□□□□□ -2.15
LETMD1-226ENST00000550755 CSMD3Q7Z407 3707 aa1.65□□□□□ -2.15
LETMD1-226ENST00000550755 ALMS1Q8TCU4 4167 aa1.65□□□□□ -2.15
LETMD1-226ENST00000550755 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
LETMD1-226ENST00000550755 A0A096LNI7 61 aa1.64□□□□□ -2.15
LETMD1-226ENST00000550755 ETDCA0A1B0GVM5 59 aa1.64□□□□□ -2.15
LETMD1-226ENST00000550755 SPRR1BP22528 89 aa1.64□□□□□ -2.15
LETMD1-226ENST00000550755 MRPL34Q9BQ48 92 aaKnown RBP1.64□□□□□ -2.15
LETMD1-226ENST00000550755 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
LETMD1-226ENST00000550755 DNAH5Q8TE73 4624 aa1.63□□□□□ -2.15
LETMD1-226ENST00000550755 COL7A1Q02388 2944 aa1.63□□□□□ -2.15
LETMD1-226ENST00000550755 KRTAP10-4P60372 401 aaPredicted RBP1.63□□□□□ -2.15
LETMD1-226ENST00000550755 FAT2Q9NYQ8 4349 aa1.61□□□□□ -2.15
LETMD1-226ENST00000550755 HECTD4Q9Y4D8 3996 aa1.61□□□□□ -2.15
LETMD1-226ENST00000550755 KMT2AQ03164 3969 aa1.6□□□□□ -2.15
LETMD1-226ENST00000550755 PRLHP81277 87 aa1.6□□□□□ -2.15
LETMD1-226ENST00000550755 DEFB105AQ8NG35 78 aa1.6□□□□□ -2.15
LETMD1-226ENST00000550755 TENM2Q9NT68 2774 aa1.59□□□□□ -2.15
LETMD1-226ENST00000550755 DNHD1Q96M86 4753 aa1.59□□□□□ -2.16
LETMD1-226ENST00000550755 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.16
LETMD1-226ENST00000550755 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
LETMD1-226ENST00000550755 LRP1BQ9NZR2 4599 aa1.57□□□□□ -2.16
LETMD1-226ENST00000550755 MEGF8Q7Z7M0 2845 aa1.57□□□□□ -2.16
LETMD1-226ENST00000550755 PKD1P98161 4303 aa1.57□□□□□ -2.16
LETMD1-226ENST00000550755 MMP24-AS1A0A0U1RRL7 71 aa1.56□□□□□ -2.16
LETMD1-226ENST00000550755 COX6B2Q6YFQ2 88 aa1.56□□□□□ -2.16
LETMD1-226ENST00000550755 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
LETMD1-226ENST00000550755 TGP01266 2768 aa1.55□□□□□ -2.16
LETMD1-226ENST00000550755 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
LETMD1-226ENST00000550755 SRRM2Q9UQ35 2752 aaKnown RBP1.54□□□□□ -2.16
LETMD1-226ENST00000550755 Q5VSD8 79 aa1.54□□□□□ -2.16
LETMD1-226ENST00000550755 WFDC13Q8IUB5 93 aa1.54□□□□□ -2.16
LETMD1-226ENST00000550755 APOBP04114 4563 aaKnown RBP1.54□□□□□ -2.16
LETMD1-226ENST00000550755 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.17
LETMD1-226ENST00000550755 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
LETMD1-226ENST00000550755 FAT1Q14517 4588 aa1.51□□□□□ -2.17
LETMD1-226ENST00000550755 HYDINQ4G0P3 5121 aa1.51□□□□□ -2.17
LETMD1-226ENST00000550755 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
LETMD1-226ENST00000550755 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
LETMD1-226ENST00000550755 TNXBP22105 4242 aa1.47□□□□□ -2.17
LETMD1-226ENST00000550755 SPINK1P00995 79 aa1.47□□□□□ -2.17
LETMD1-226ENST00000550755 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
LETMD1-226ENST00000550755 SPINK6Q6UWN8 80 aa1.47□□□□□ -2.17
LETMD1-226ENST00000550755 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
LETMD1-226ENST00000550755 HSPG2P98160 4391 aa1.46□□□□□ -2.18
LETMD1-226ENST00000550755 RYR2Q92736 4967 aa1.45□□□□□ -2.18
LETMD1-226ENST00000550755 H0YAA0 97 aa1.43□□□□□ -2.18
LETMD1-226ENST00000550755 KMT2CQ8NEZ4 4911 aaKnown RBP1.43□□□□□ -2.18
LETMD1-226ENST00000550755 LRP1Q07954 4544 aaKnown RBP1.42□□□□□ -2.18
LETMD1-226ENST00000550755 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms