RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 MYO15AQ9UKN7 3530 aa3.78□□□□□ -1.8
PPFIA2-216ENST00000549396 WDFY3Q8IZQ1 3526 aa3.76□□□□□ -1.81
PPFIA2-216ENST00000549396 CUBNO60494 3623 aa3.76□□□□□ -1.81
PPFIA2-216ENST00000549396 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
PPFIA2-216ENST00000549396 DNAH3Q8TD57 4116 aa3.75□□□□□ -1.81
PPFIA2-216ENST00000549396 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
PPFIA2-216ENST00000549396 LRP1BQ9NZR2 4599 aa3.74□□□□□ -1.81
PPFIA2-216ENST00000549396 HSPG2P98160 4391 aa3.73□□□□□ -1.81
PPFIA2-216ENST00000549396 TRRAPQ9Y4A5 3859 aa3.73□□□□□ -1.81
PPFIA2-216ENST00000549396 AKAP9Q99996 3911 aa3.73□□□□□ -1.81
PPFIA2-216ENST00000549396 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
PPFIA2-216ENST00000549396 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
PPFIA2-216ENST00000549396 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
PPFIA2-216ENST00000549396 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
PPFIA2-216ENST00000549396 MT1FP04733 61 aa3.67□□□□□ -1.82
PPFIA2-216ENST00000549396 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
PPFIA2-216ENST00000549396 ANK2Q01484 3957 aa3.65□□□□□ -1.82
PPFIA2-216ENST00000549396 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.83
PPFIA2-216ENST00000549396 ZFHX4Q86UP3 3567 aa3.61□□□□□ -1.83
PPFIA2-216ENST00000549396 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
PPFIA2-216ENST00000549396 SVEP1Q4LDE5 3571 aa3.59□□□□□ -1.84
PPFIA2-216ENST00000549396 CRCT1Q9UGL9 99 aa3.58□□□□□ -1.84
PPFIA2-216ENST00000549396 LAMA5O15230 3695 aa3.58□□□□□ -1.84
PPFIA2-216ENST00000549396 RYR2Q92736 4967 aa3.57□□□□□ -1.84
PPFIA2-216ENST00000549396 APOBP04114 4563 aaKnown RBP3.57□□□□□ -1.84
PPFIA2-216ENST00000549396 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
PPFIA2-216ENST00000549396 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
PPFIA2-216ENST00000549396 SPENQ96T58 3664 aaKnown RBP3.53□□□□□ -1.84
PPFIA2-216ENST00000549396 SRRM2Q9UQ35 2752 aaKnown RBP3.53□□□□□ -1.84
PPFIA2-216ENST00000549396 DNAH7Q8WXX0 4024 aa3.53□□□□□ -1.84
PPFIA2-216ENST00000549396 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
PPFIA2-216ENST00000549396 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
PPFIA2-216ENST00000549396 FAT1Q14517 4588 aa3.52□□□□□ -1.85
PPFIA2-216ENST00000549396 CSMD1Q96PZ7 3565 aa3.52□□□□□ -1.85
PPFIA2-216ENST00000549396 PRKDCP78527 4128 aaKnown RBP3.51□□□□□ -1.85
PPFIA2-216ENST00000549396 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
PPFIA2-216ENST00000549396 DMDP11532 3685 aa3.5□□□□□ -1.85
PPFIA2-216ENST00000549396 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
PPFIA2-216ENST00000549396 RYR1P21817 5038 aa3.49□□□□□ -1.85
PPFIA2-216ENST00000549396 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
PPFIA2-216ENST00000549396 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
PPFIA2-216ENST00000549396 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
PPFIA2-216ENST00000549396 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
PPFIA2-216ENST00000549396 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
PPFIA2-216ENST00000549396 CSMD2Q7Z408 3487 aa3.47□□□□□ -1.85
PPFIA2-216ENST00000549396 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
PPFIA2-216ENST00000549396 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
PPFIA2-216ENST00000549396 RYR3Q15413 4870 aa3.44□□□□□ -1.86
PPFIA2-216ENST00000549396 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
PPFIA2-216ENST00000549396 KRTAP17-1Q9BYP8 105 aa3.41□□□□□ -1.86
PPFIA2-216ENST00000549396 MUC3AQ02505 3323 aa3.41□□□□□ -1.86
PPFIA2-216ENST00000549396 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.86
PPFIA2-216ENST00000549396 LCE2CQ5TA81 110 aa3.4□□□□□ -1.86
PPFIA2-216ENST00000549396 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.86
PPFIA2-216ENST00000549396 MT1BP07438 61 aa3.4□□□□□ -1.87
PPFIA2-216ENST00000549396 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
PPFIA2-216ENST00000549396 MT1XP80297 61 aa3.39□□□□□ -1.87
PPFIA2-216ENST00000549396 VPS13CQ709C8 3753 aa3.37□□□□□ -1.87
PPFIA2-216ENST00000549396 SPRR2EP22531 72 aa3.36□□□□□ -1.87
PPFIA2-216ENST00000549396 SPRR2BP35325 72 aa3.36□□□□□ -1.87
PPFIA2-216ENST00000549396 SPRR2AP35326 72 aa3.36□□□□□ -1.87
PPFIA2-216ENST00000549396 ZNF469Q96JG9 3925 aaPredicted RBP3.36□□□□□ -1.87
PPFIA2-216ENST00000549396 MT1GP13640 62 aa3.35□□□□□ -1.87
PPFIA2-216ENST00000549396 VPS13BQ7Z7G8 4022 aa3.31□□□□□ -1.88
PPFIA2-216ENST00000549396 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
PPFIA2-216ENST00000549396 LCE2BO14633 110 aa3.3□□□□□ -1.88
PPFIA2-216ENST00000549396 SPRR2DP22532 72 aa3.29□□□□□ -1.88
PPFIA2-216ENST00000549396 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
PPFIA2-216ENST00000549396 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
PPFIA2-216ENST00000549396 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
PPFIA2-216ENST00000549396 PKD1P98161 4303 aa3.25□□□□□ -1.89
PPFIA2-216ENST00000549396 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
PPFIA2-216ENST00000549396 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
PPFIA2-216ENST00000549396 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
PPFIA2-216ENST00000549396 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
PPFIA2-216ENST00000549396 HERC2O95714 4834 aa3.22□□□□□ -1.89
PPFIA2-216ENST00000549396 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
PPFIA2-216ENST00000549396 PKHD1P08F94 4074 aa3.2□□□□□ -1.9
PPFIA2-216ENST00000549396 KMT2AQ03164 3969 aa3.2□□□□□ -1.9
PPFIA2-216ENST00000549396 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
PPFIA2-216ENST00000549396 MT1LQ93083 61 aa3.15□□□□□ -1.9
PPFIA2-216ENST00000549396 LCE2AQ5TA79 106 aaPredicted RBP3.13□□□□□ -1.91
PPFIA2-216ENST00000549396 KMT2CQ8NEZ4 4911 aaKnown RBP3.11□□□□□ -1.91
PPFIA2-216ENST00000549396 MT1EP04732 61 aa3.1□□□□□ -1.91
PPFIA2-216ENST00000549396 KRTAP9-2Q9BYQ4 174 aa3.07□□□□□ -1.92
PPFIA2-216ENST00000549396 TNXBP22105 4242 aa3.05□□□□□ -1.92
PPFIA2-216ENST00000549396 KRTAP4-8A0A0G2JLE6 195 aa3.02□□□□□ -1.93
PPFIA2-216ENST00000549396 KRTAP4-8Q9BYQ9 185 aa3.02□□□□□ -1.93
PPFIA2-216ENST00000549396 LYSTQ99698 3801 aa3.01□□□□□ -1.93
PPFIA2-216ENST00000549396 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
PPFIA2-216ENST00000549396 LCE3BQ5TA77 95 aa3□□□□□ -1.93
PPFIA2-216ENST00000549396 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
PPFIA2-216ENST00000549396 MT1MQ8N339 61 aa2.99□□□□□ -1.93
PPFIA2-216ENST00000549396 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
PPFIA2-216ENST00000549396 LRP2P98164 4655 aa2.98□□□□□ -1.93
PPFIA2-216ENST00000549396 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
PPFIA2-216ENST00000549396 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
PPFIA2-216ENST00000549396 CSMD3Q7Z407 3707 aa2.97□□□□□ -1.93
PPFIA2-216ENST00000549396 MT3P25713 68 aa2.96□□□□□ -1.94
PPFIA2-216ENST00000549396 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms