RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 DEFB105AQ8NG35 78 aa0.67□□□□□ -2.3
USP15-213ENST00000549268 FXYD6Q9H0Q3 95 aa0.67□□□□□ -2.3
USP15-213ENST00000549268 APLNQ9ULZ1 77 aa0.67□□□□□ -2.3
USP15-213ENST00000549268 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
USP15-213ENST00000549268 DNAH3Q8TD57 4116 aa0.66□□□□□ -2.3
USP15-213ENST00000549268 PKD1P98161 4303 aa0.66□□□□□ -2.3
USP15-213ENST00000549268 IFI27P40305 119 aaPredicted RBP0.66□□□□□ -2.3
USP15-213ENST00000549268 UMAD1C9J7I0 102 aa0.65□□□□□ -2.31
USP15-213ENST00000549268 RPL38P63173 70 aaKnown RBP0.65□□□□□ -2.31
USP15-213ENST00000549268 KLK9Q2XQG4 91 aa0.65□□□□□ -2.31
USP15-213ENST00000549268 SMCO4Q9NRQ5 59 aa0.65□□□□□ -2.31
USP15-213ENST00000549268 VPS13BQ7Z7G8 4022 aa0.64□□□□□ -2.31
USP15-213ENST00000549268 FAT3Q8TDW7 4589 aa0.64□□□□□ -2.31
USP15-213ENST00000549268 PKHD1L1Q86WI1 4243 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 FAT1Q14517 4588 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 H1FX-AS1Q4G0G2 97 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 Q9Y3F1 56 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 LRP1BQ9NZR2 4599 aa0.63□□□□□ -2.31
USP15-213ENST00000549268 VPS13DQ5THJ4 4388 aa0.62□□□□□ -2.31
USP15-213ENST00000549268 DNAH11Q96DT5 4516 aa0.62□□□□□ -2.31
USP15-213ENST00000549268 CCL22O00626 93 aa0.62□□□□□ -2.31
USP15-213ENST00000549268 NREPQ16612 68 aa0.62□□□□□ -2.31
USP15-213ENST00000549268 HMGA1P17096 107 aaKnown RBP0.61□□□□□ -2.31
USP15-213ENST00000549268 DEFA5Q01523 94 aa0.61□□□□□ -2.31
USP15-213ENST00000549268 U3KQA8 63 aa0.61□□□□□ -2.31
USP15-213ENST00000549268 DNAH5Q8TE73 4624 aa0.61□□□□□ -2.31
USP15-213ENST00000549268 DNAH2Q9P225 4427 aa0.6□□□□□ -2.31
USP15-213ENST00000549268 PDCD5O14737 125 aa0.6□□□□□ -2.31
USP15-213ENST00000549268 DNAH17Q9UFH2 4485 aa0.6□□□□□ -2.31
USP15-213ENST00000549268 SPINK4O60575 86 aa0.59□□□□□ -2.31
USP15-213ENST00000549268 HEPN1Q6WQI6 88 aa0.59□□□□□ -2.31
USP15-213ENST00000549268 CD52P31358 61 aa0.57□□□□□ -2.32
USP15-213ENST00000549268 TNXBP22105 4242 aa0.56□□□□□ -2.32
USP15-213ENST00000549268 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
USP15-213ENST00000549268 STATHP02808 62 aa0.56□□□□□ -2.32
USP15-213ENST00000549268 TFF3Q07654 80 aa0.56□□□□□ -2.32
USP15-213ENST00000549268 H3BVH4 76 aa0.55□□□□□ -2.32
USP15-213ENST00000549268 NDUFA4O00483 81 aa0.55□□□□□ -2.32
USP15-213ENST00000549268 CDKN2A-AS1Q9UH64 79 aa0.55□□□□□ -2.32
USP15-213ENST00000549268 NDUFA3O95167 84 aa0.54□□□□□ -2.32
USP15-213ENST00000549268 LPAP08519 4548 aa0.54□□□□□ -2.32
USP15-213ENST00000549268 COX6B2Q6YFQ2 88 aa0.53□□□□□ -2.32
USP15-213ENST00000549268 DEFB104AQ8WTQ1 72 aa0.53□□□□□ -2.32
USP15-213ENST00000549268 DNAH8Q96JB1 4490 aa0.52□□□□□ -2.33
USP15-213ENST00000549268 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
USP15-213ENST00000549268 WFDC13Q8IUB5 93 aa0.52□□□□□ -2.33
USP15-213ENST00000549268 HILPDAQ9Y5L2 63 aa0.52□□□□□ -2.33
USP15-213ENST00000549268 SMR3BP02814 79 aaPredicted RBP0.51□□□□□ -2.33
USP15-213ENST00000549268 MUC17Q685J3 4493 aa0.51□□□□□ -2.33
USP15-213ENST00000549268 DEFB133Q30KQ1 61 aa0.5□□□□□ -2.33
USP15-213ENST00000549268 LYNX1G3V0Z9 82 aa0.49□□□□□ -2.33
USP15-213ENST00000549268 KRTAP19-6Q3LI70 58 aa0.48□□□□□ -2.33
USP15-213ENST00000549268 FLGP20930 4061 aaPredicted RBP0.47□□□□□ -2.33
USP15-213ENST00000549268 SPRR2EP22531 72 aa0.47□□□□□ -2.33
USP15-213ENST00000549268 SPRR2BP35325 72 aa0.47□□□□□ -2.33
USP15-213ENST00000549268 SPRR2AP35326 72 aa0.47□□□□□ -2.33
USP15-213ENST00000549268 DEFB108AA8MXU0 73 aa0.46□□□□□ -2.34
USP15-213ENST00000549268 PRM1P04553 51 aa0.46□□□□□ -2.34
USP15-213ENST00000549268 MT1HL1P0DM35 61 aa0.46□□□□□ -2.34
USP15-213ENST00000549268 SPRR2DP22532 72 aa0.46□□□□□ -2.34
USP15-213ENST00000549268 M0R2T5 61 aa0.45□□□□□ -2.34
USP15-213ENST00000549268 ENHOQ6UWT2 76 aa0.45□□□□□ -2.34
USP15-213ENST00000549268 ATXN8Q156A1 80 aa0.44□□□□□ -2.34
USP15-213ENST00000549268 GNG13Q9P2W3 67 aa0.42□□□□□ -2.34
USP15-213ENST00000549268 C3orf79P0CE67 100 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 MT4P47944 62 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 LINC00158P58513 81 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 MT1HP80294 61 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 SPRR2FQ96RM1 72 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 KCNQ1DNQ9H478 68 aa0.41□□□□□ -2.34
USP15-213ENST00000549268 DEFB131BA0A096LNP1 70 aa0.39□□□□□ -2.35
USP15-213ENST00000549268 H0YAA0 97 aa0.39□□□□□ -2.35
USP15-213ENST00000549268 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
USP15-213ENST00000549268 SMIM31A0A1B0GVY4 71 aa0.37□□□□□ -2.35
USP15-213ENST00000549268 DEFB108BQ8NET1 73 aa0.36□□□□□ -2.35
USP15-213ENST00000549268 H3BSH0 61 aa0.35□□□□□ -2.35
USP15-213ENST00000549268 MRPL33O75394 65 aaKnown RBP0.35□□□□□ -2.35
USP15-213ENST00000549268 CRIP1P50238 77 aa0.34□□□□□ -2.36
USP15-213ENST00000549268 DEFB135Q30KP9 77 aa0.34□□□□□ -2.36
USP15-213ENST00000549268 A0A087WWC5 75 aa0.33□□□□□ -2.36
USP15-213ENST00000549268 KRTAP19-2Q3LHN2 52 aa0.33□□□□□ -2.36
USP15-213ENST00000549268 ETDCA0A1B0GVM5 59 aa0.32□□□□□ -2.36
USP15-213ENST00000549268 H3BUX3 64 aa0.32□□□□□ -2.36
USP15-213ENST00000549268 KRTAP8-1Q8IUC2 63 aa0.32□□□□□ -2.36
USP15-213ENST00000549268 MT2AP02795 61 aa0.31□□□□□ -2.36
USP15-213ENST00000549268 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
USP15-213ENST00000549268 COX14Q96I36 57 aa0.31□□□□□ -2.36
USP15-213ENST00000549268 MT1FP04733 61 aa0.3□□□□□ -2.36
USP15-213ENST00000549268 DEFB136Q30KP8 78 aa0.3□□□□□ -2.36
USP15-213ENST00000549268 DEFB110Q30KQ9 67 aa0.3□□□□□ -2.36
USP15-213ENST00000549268 LINC01549A6NIU2 74 aa0.29□□□□□ -2.36
USP15-213ENST00000549268 DEFB4AO15263 64 aa0.27□□□□□ -2.37
USP15-213ENST00000549268 DEFB130BP0DP73 79 aa0.27□□□□□ -2.37
USP15-213ENST00000549268 DEFB130AP0DP74 79 aa0.27□□□□□ -2.37
USP15-213ENST00000549268 IAPPP10997 89 aa0.27□□□□□ -2.37
USP15-213ENST00000549268 DEFB114Q30KQ6 69 aa0.27□□□□□ -2.37
USP15-213ENST00000549268 HTN3P15516 51 aa0.25□□□□□ -2.37
USP15-213ENST00000549268 H0YGG7 62 aa0.23□□□□□ -2.37
USP15-213ENST00000549268 SPART-AS1P0CW21 52 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms