RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 SACSQ9NZJ4 4579 aa2.98□□□□□ -1.93
UBE2N-202ENST00000548946 ADM2Q7Z4H4 148 aa2.97□□□□□ -1.93
UBE2N-202ENST00000548946 DNAH5Q8TE73 4624 aa2.97□□□□□ -1.93
UBE2N-202ENST00000548946 STAB1Q9NY15 2570 aa2.97□□□□□ -1.93
UBE2N-202ENST00000548946 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
UBE2N-202ENST00000548946 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.94
UBE2N-202ENST00000548946 A0A087WTM6 91 aa2.95□□□□□ -1.94
UBE2N-202ENST00000548946 A0A1B0GU69 56 aa2.95□□□□□ -1.94
UBE2N-202ENST00000548946 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
UBE2N-202ENST00000548946 PRKDCP78527 4128 aaKnown RBP2.95□□□□□ -1.94
UBE2N-202ENST00000548946 NBEAL1Q6ZS30 2694 aa2.94□□□□□ -1.94
UBE2N-202ENST00000548946 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
UBE2N-202ENST00000548946 SPINK6Q6UWN8 80 aa2.94□□□□□ -1.94
UBE2N-202ENST00000548946 STAB2Q8WWQ8 2551 aa2.94□□□□□ -1.94
UBE2N-202ENST00000548946 COL6A5A8TX70 2615 aa2.93□□□□□ -1.94
UBE2N-202ENST00000548946 STARD9Q9P2P6 4700 aa2.93□□□□□ -1.94
UBE2N-202ENST00000548946 IGLV7-43P04211 117 aa2.93□□□□□ -1.94
UBE2N-202ENST00000548946 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
UBE2N-202ENST00000548946 UQCR11O14957 56 aa2.92□□□□□ -1.94
UBE2N-202ENST00000548946 CIRBP-AS1Q8TBR5 109 aa2.92□□□□□ -1.94
UBE2N-202ENST00000548946 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
UBE2N-202ENST00000548946 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
UBE2N-202ENST00000548946 FBN1P35555 2871 aaKnown RBP2.9□□□□□ -1.94
UBE2N-202ENST00000548946 LRP1BQ9NZR2 4599 aa2.89□□□□□ -1.95
UBE2N-202ENST00000548946 KRTAP13-2Q52LG2 175 aa2.89□□□□□ -1.95
UBE2N-202ENST00000548946 NUPR2A6NF83 97 aa2.88□□□□□ -1.95
UBE2N-202ENST00000548946 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
UBE2N-202ENST00000548946 CSMD3Q7Z407 3707 aa2.88□□□□□ -1.95
UBE2N-202ENST00000548946 MGAM2Q2M2H8 2515 aa2.87□□□□□ -1.95
UBE2N-202ENST00000548946 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
UBE2N-202ENST00000548946 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
UBE2N-202ENST00000548946 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
UBE2N-202ENST00000548946 Q6ZSA8 131 aa2.84□□□□□ -1.95
UBE2N-202ENST00000548946 A8MUU9 505 aa2.83□□□□□ -1.96
UBE2N-202ENST00000548946 LY6G6CO95867 125 aa2.83□□□□□ -1.96
UBE2N-202ENST00000548946 KMT2AQ03164 3969 aa2.83□□□□□ -1.96
UBE2N-202ENST00000548946 PKHD1L1Q86WI1 4243 aa2.82□□□□□ -1.96
UBE2N-202ENST00000548946 H0YAA0 97 aa2.82□□□□□ -1.96
UBE2N-202ENST00000548946 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
UBE2N-202ENST00000548946 C1orf134Q5TEV5 83 aa2.81□□□□□ -1.96
UBE2N-202ENST00000548946 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
UBE2N-202ENST00000548946 SPINK1P00995 79 aa2.8□□□□□ -1.96
UBE2N-202ENST00000548946 FAT2Q9NYQ8 4349 aa2.8□□□□□ -1.96
UBE2N-202ENST00000548946 PKD1P98161 4303 aa2.79□□□□□ -1.96
UBE2N-202ENST00000548946 H1FX-AS1Q4G0G2 97 aa2.79□□□□□ -1.96
UBE2N-202ENST00000548946 DYNC1H1Q14204 4646 aaKnown RBP2.79□□□□□ -1.96
UBE2N-202ENST00000548946 A0A1B0GU33 70 aa2.78□□□□□ -1.96
UBE2N-202ENST00000548946 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
UBE2N-202ENST00000548946 TGP01266 2768 aa2.77□□□□□ -1.97
UBE2N-202ENST00000548946 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
UBE2N-202ENST00000548946 FBN3Q75N90 2809 aa2.76□□□□□ -1.97
UBE2N-202ENST00000548946 MEGF8Q7Z7M0 2845 aa2.75□□□□□ -1.97
UBE2N-202ENST00000548946 ROMO1P60602 79 aa2.75□□□□□ -1.97
UBE2N-202ENST00000548946 RPS29P62273 56 aaKnown RBP2.75□□□□□ -1.97
UBE2N-202ENST00000548946 C20orf166-AS1Q96NR2 134 aa2.75□□□□□ -1.97
UBE2N-202ENST00000548946 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
UBE2N-202ENST00000548946 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
UBE2N-202ENST00000548946 FAT1Q14517 4588 aa2.73□□□□□ -1.97
UBE2N-202ENST00000548946 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
UBE2N-202ENST00000548946 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
UBE2N-202ENST00000548946 P0C880 135 aa2.7□□□□□ -1.98
UBE2N-202ENST00000548946 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
UBE2N-202ENST00000548946 FLG2Q5D862 2391 aaPredicted RBP2.69□□□□□ -1.98
UBE2N-202ENST00000548946 K7ERS5 55 aa2.69□□□□□ -1.98
UBE2N-202ENST00000548946 HSPG2P98160 4391 aa2.68□□□□□ -1.98
UBE2N-202ENST00000548946 C9orf92A6NGG3 77 aa2.68□□□□□ -1.98
UBE2N-202ENST00000548946 CRIPTQ9P021 101 aa2.68□□□□□ -1.98
UBE2N-202ENST00000548946 PKHD1P08F94 4074 aa2.68□□□□□ -1.98
UBE2N-202ENST00000548946 DNHD1Q96M86 4753 aa2.67□□□□□ -1.98
UBE2N-202ENST00000548946 TNXBP22105 4242 aa2.67□□□□□ -1.98
UBE2N-202ENST00000548946 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
UBE2N-202ENST00000548946 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
UBE2N-202ENST00000548946 RPL37P61927 97 aaKnown RBP2.65□□□□□ -1.99
UBE2N-202ENST00000548946 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
UBE2N-202ENST00000548946 KRTAP10-4P60372 401 aaPredicted RBP2.63□□□□□ -1.99
UBE2N-202ENST00000548946 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
UBE2N-202ENST00000548946 A0A0D9SG42 100 aa2.6□□□□□ -1.99
UBE2N-202ENST00000548946 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
UBE2N-202ENST00000548946 RYR2Q92736 4967 aa2.59□□□□□ -1.99
UBE2N-202ENST00000548946 S4R3F8 94 aa2.59□□□□□ -1.99
UBE2N-202ENST00000548946 SMR3BP02814 79 aaPredicted RBP2.58□□□□□ -2
UBE2N-202ENST00000548946 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
UBE2N-202ENST00000548946 KRTAP12-1P59990 96 aa2.56□□□□□ -2
UBE2N-202ENST00000548946 DMBT1Q9UGM3 2413 aaPredicted RBP2.55□□□□□ -2
UBE2N-202ENST00000548946 RYR1P21817 5038 aa2.55□□□□□ -2
UBE2N-202ENST00000548946 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
UBE2N-202ENST00000548946 M0QZ58 72 aa2.5□□□□□ -2.01
UBE2N-202ENST00000548946 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
UBE2N-202ENST00000548946 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
UBE2N-202ENST00000548946 HERC1Q15751 4861 aa2.47□□□□□ -2.01
UBE2N-202ENST00000548946 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
UBE2N-202ENST00000548946 RYR3Q15413 4870 aa2.42□□□□□ -2.02
UBE2N-202ENST00000548946 LRP2P98164 4655 aa2.42□□□□□ -2.02
UBE2N-202ENST00000548946 MT1HL1P0DM35 61 aa2.41□□□□□ -2.02
UBE2N-202ENST00000548946 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
UBE2N-202ENST00000548946 LPAP08519 4548 aa2.39□□□□□ -2.03
UBE2N-202ENST00000548946 Q5VSD8 79 aa2.39□□□□□ -2.03
UBE2N-202ENST00000548946 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
UBE2N-202ENST00000548946 KIAA1109Q2LD37 5005 aa2.36□□□□□ -2.03
UBE2N-202ENST00000548946 KRTAP21-3Q3LHN1 58 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms