RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FCER1GP30273 86 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM11AP58511 58 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 GNG2P59768 71 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 LSM3P62310 102 aaKnown RBP-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 MRPS10P82664 201 aaKnown RBP-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 CCDC58Q4VC31 144 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 S100A7L2Q5SY68 101 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM11BQ8TCY0 68 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 PFDN5Q99471 154 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 PRR15LQ9BU68 103 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 PDCD10Q9BUL8 212 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 NXT2Q9NPJ8 142 aaKnown RBP-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 BATF3Q9NR55 127 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 GID8Q9NWU2 228 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 PSENENQ9NZ42 101 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 GSKIPQ9P0R6 139 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 AP4S1Q9Y587 144 aa-0.26□□□□□ -2.45
CCDC38-206ENST00000548771 F2Z2F3 143 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 PPP1R17O96001 155 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 CKS2P33552 79 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 IFI27P40305 119 aaPredicted RBP-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 TMEM128Q5BJH2 165 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 TRIQKQ629K1 86 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 BAGE2Q86Y30 109 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 LINC00308Q8TCZ7 52 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 PYDC1Q8WXC3 89 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 SAR1AQ9NR31 198 aa-0.27□□□□□ -2.45
CCDC38-206ENST00000548771 A0A1W2PRE2 83 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 TCRBV3S1A0A5B6 114 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 hADV29S1A0JD25 119 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 IFITM1P13164 125 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 PMCHL1Q16048 86 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 MEIG1Q5JSS6 88 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 RPL7L1Q6DKI1 246 aaKnown RBP-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 STX12Q86Y82 276 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 PPP1R1CQ8WVI7 109 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 ANP32BQ92688 251 aaKnown RBP-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 C2orf88Q9BSF0 95 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 SPANXDQ9BXN6 97 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 SMIM3Q9BZL3 60 aa-0.28□□□□□ -2.45
CCDC38-206ENST00000548771 TRAV22A0A0B4J277 110 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 A0A1B0GUT8 65 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 A0A1B0GX51 115 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 EFCAB10A6NFE3 127 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 C9JAW5 83 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 J3KT08 172 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 HBDP02042 147 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 ACYP1P07311 99 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 ACYP2P14621 99 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 UBE2G1P62253 170 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 SEC11AP67812 179 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 SSBP1Q04837 148 aaKnown RBP-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 TMEM170BQ5T4T1 132 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 DEFB107AQ8IZN7 70 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 Q8N8P6 123 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 PPDPFLQ8WWR9 84 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 VPS25Q9BRG1 176 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 SNHG12Q9BXW3 62 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 SPANXCQ9NY87 97 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 HIGD1BQ9P298 99 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 CACFD1Q9UGQ2 172 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 V9GYV3 84 aa-0.29□□□□□ -2.46
CCDC38-206ENST00000548771 MYMXA0A1B0GTQ4 84 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 SMIM27A0A1W2PRY6 76 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 H7BZZ5 65 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 PDCD5O14737 125 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 NDUFB1O75438 58 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 FAM107AO95990 144 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 S100GP29377 79 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 S100A12P80511 92 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 MRPL54Q6P161 138 aaKnown RBP-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 BAGE3Q86Y29 109 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 C12orf57Q99622 126 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 PMCHL2Q9BQD1 86 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 TMEM167BQ9NRX6 74 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 HSPB11Q9Y547 144 aa-0.3□□□□□ -2.46
CCDC38-206ENST00000548771 CTXND1A0A1B0GTU2 59 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 GNGT2O14610 69 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 NDUFB6O95139 128 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 AKAIN1P0CW23 69 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 GNG4P50150 75 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 SFTA2Q6UW10 78 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 SMIM15Q7Z3B0 74 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 BRK1Q8WUW1 75 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 SMIM4Q8WVI0 70 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 S100A16Q96FQ6 103 aaKnown RBP-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 TCEAL7Q9BRU2 100 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 SPCS1Q9Y6A9 102 aa-0.31□□□□□ -2.46
CCDC38-206ENST00000548771 NAP1L6A6NFF2 107 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 H0Y9P7 68 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 MPC2O95563 127 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 S100A8P05109 93 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 G0S2P27469 103 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 GNG11P61952 73 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 RPS28P62857 69 aaKnown RBP-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 SERF2P84101 59 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 NREPQ16612 68 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 WHAMMP3Q1A5X7 153 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 GNG13Q9P2W3 67 aa-0.32□□□□□ -2.46
CCDC38-206ENST00000548771 V9GYH0 126 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms