RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
CIT-217ENST00000545913 MT1HL1P0DM35 61 aa5.25□□□□□ -1.57
CIT-217ENST00000545913 HUWE1Q7Z6Z7 4374 aaKnown RBP5.23□□□□□ -1.57
CIT-217ENST00000545913 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
CIT-217ENST00000545913 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
CIT-217ENST00000545913 KMT2AQ03164 3969 aa5.18□□□□□ -1.58
CIT-217ENST00000545913 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.58
CIT-217ENST00000545913 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.59
CIT-217ENST00000545913 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
CIT-217ENST00000545913 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
CIT-217ENST00000545913 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
CIT-217ENST00000545913 KRTAP10-4P60372 401 aaPredicted RBP5.07□□□□□ -1.6
CIT-217ENST00000545913 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
CIT-217ENST00000545913 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
CIT-217ENST00000545913 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
CIT-217ENST00000545913 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
CIT-217ENST00000545913 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
CIT-217ENST00000545913 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
CIT-217ENST00000545913 DNAH9Q9NYC9 4486 aa4.83□□□□□ -1.64
CIT-217ENST00000545913 LORP23490 312 aaPredicted RBP4.82□□□□□ -1.64
CIT-217ENST00000545913 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
CIT-217ENST00000545913 DYNC2H1Q8NCM8 4307 aaKnown RBP4.72□□□□□ -1.65
CIT-217ENST00000545913 FAT2Q9NYQ8 4349 aa4.68□□□□□ -1.66
CIT-217ENST00000545913 DNAH10Q8IVF4 4471 aa4.67□□□□□ -1.66
CIT-217ENST00000545913 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
CIT-217ENST00000545913 VPS13DQ5THJ4 4388 aa4.65□□□□□ -1.66
CIT-217ENST00000545913 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
CIT-217ENST00000545913 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
CIT-217ENST00000545913 MT1HP80294 61 aa4.62□□□□□ -1.67
CIT-217ENST00000545913 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
CIT-217ENST00000545913 DNAH11Q96DT5 4516 aa4.54□□□□□ -1.68
CIT-217ENST00000545913 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
CIT-217ENST00000545913 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CIT-217ENST00000545913 MT2AP02795 61 aa4.53□□□□□ -1.68
CIT-217ENST00000545913 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
CIT-217ENST00000545913 STARD9Q9P2P6 4700 aa4.51□□□□□ -1.69
CIT-217ENST00000545913 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
CIT-217ENST00000545913 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
CIT-217ENST00000545913 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
CIT-217ENST00000545913 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
CIT-217ENST00000545913 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
CIT-217ENST00000545913 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
CIT-217ENST00000545913 DNAH17Q9UFH2 4485 aa4.45□□□□□ -1.7
CIT-217ENST00000545913 MT1FP04733 61 aa4.42□□□□□ -1.7
CIT-217ENST00000545913 LRP1BQ9NZR2 4599 aa4.38□□□□□ -1.71
CIT-217ENST00000545913 PKD1P98161 4303 aa4.27□□□□□ -1.73
CIT-217ENST00000545913 TNXBP22105 4242 aa4.24□□□□□ -1.73
CIT-217ENST00000545913 FAT1Q14517 4588 aa4.22□□□□□ -1.73
CIT-217ENST00000545913 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.73
CIT-217ENST00000545913 SPRR2EP22531 72 aa4.19□□□□□ -1.74
CIT-217ENST00000545913 SPRR2BP35325 72 aa4.19□□□□□ -1.74
CIT-217ENST00000545913 SPRR2AP35326 72 aa4.19□□□□□ -1.74
CIT-217ENST00000545913 SACSQ9NZJ4 4579 aa4.17□□□□□ -1.74
CIT-217ENST00000545913 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
CIT-217ENST00000545913 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
CIT-217ENST00000545913 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
CIT-217ENST00000545913 MT1XP80297 61 aa4.12□□□□□ -1.75
CIT-217ENST00000545913 DYNC1H1Q14204 4646 aaKnown RBP4.1□□□□□ -1.75
CIT-217ENST00000545913 LCE2BO14633 110 aa4.09□□□□□ -1.75
CIT-217ENST00000545913 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.75
CIT-217ENST00000545913 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
CIT-217ENST00000545913 SPRR2DP22532 72 aa4.07□□□□□ -1.76
CIT-217ENST00000545913 FAT3Q8TDW7 4589 aa4.04□□□□□ -1.76
CIT-217ENST00000545913 MYCBP2O75592 4640 aa4.04□□□□□ -1.76
CIT-217ENST00000545913 MT1GP13640 62 aa4.04□□□□□ -1.76
CIT-217ENST00000545913 DNHD1Q96M86 4753 aa4.01□□□□□ -1.77
CIT-217ENST00000545913 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
CIT-217ENST00000545913 MT1BP07438 61 aa3.99□□□□□ -1.77
CIT-217ENST00000545913 HSPG2P98160 4391 aa3.97□□□□□ -1.77
CIT-217ENST00000545913 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
CIT-217ENST00000545913 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
CIT-217ENST00000545913 RYR1P21817 5038 aa3.9□□□□□ -1.78
CIT-217ENST00000545913 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
CIT-217ENST00000545913 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
CIT-217ENST00000545913 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
CIT-217ENST00000545913 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
CIT-217ENST00000545913 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
CIT-217ENST00000545913 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
CIT-217ENST00000545913 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
CIT-217ENST00000545913 MT1LQ93083 61 aa3.82□□□□□ -1.8
CIT-217ENST00000545913 LPAP08519 4548 aa3.79□□□□□ -1.8
CIT-217ENST00000545913 RYR3Q15413 4870 aa3.77□□□□□ -1.81
CIT-217ENST00000545913 LRP2P98164 4655 aa3.75□□□□□ -1.81
CIT-217ENST00000545913 MT1EP04732 61 aa3.73□□□□□ -1.81
CIT-217ENST00000545913 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
CIT-217ENST00000545913 MT3P25713 68 aa3.7□□□□□ -1.82
CIT-217ENST00000545913 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
CIT-217ENST00000545913 MT1MQ8N339 61 aa3.62□□□□□ -1.83
CIT-217ENST00000545913 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
CIT-217ENST00000545913 MT4P47944 62 aa3.58□□□□□ -1.84
CIT-217ENST00000545913 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
CIT-217ENST00000545913 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
CIT-217ENST00000545913 PRM1P04553 51 aa3.55□□□□□ -1.84
CIT-217ENST00000545913 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
CIT-217ENST00000545913 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
CIT-217ENST00000545913 RYR2Q92736 4967 aa3.49□□□□□ -1.85
CIT-217ENST00000545913 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
CIT-217ENST00000545913 HYDINQ4G0P3 5121 aa3.47□□□□□ -1.85
CIT-217ENST00000545913 LCE1DQ5T752 114 aa3.46□□□□□ -1.85
CIT-217ENST00000545913 KMT2CQ8NEZ4 4911 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms