RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 DNAH7Q8WXX0 4024 aa4.04□□□□□ -1.76
MTHFD1-202ENST00000545908 KRTAP3-3Q9BYR6 98 aa4.04□□□□□ -1.76
MTHFD1-202ENST00000545908 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
MTHFD1-202ENST00000545908 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
MTHFD1-202ENST00000545908 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
MTHFD1-202ENST00000545908 DNAH10Q8IVF4 4471 aa4.01□□□□□ -1.77
MTHFD1-202ENST00000545908 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
MTHFD1-202ENST00000545908 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
MTHFD1-202ENST00000545908 DNAH2Q9P225 4427 aa3.99□□□□□ -1.77
MTHFD1-202ENST00000545908 PRKDCP78527 4128 aaKnown RBP3.98□□□□□ -1.77
MTHFD1-202ENST00000545908 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
MTHFD1-202ENST00000545908 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
MTHFD1-202ENST00000545908 KRTAP3-2Q9BYR7 98 aa3.96□□□□□ -1.78
MTHFD1-202ENST00000545908 KMT2AQ03164 3969 aa3.95□□□□□ -1.78
MTHFD1-202ENST00000545908 FBN3Q75N90 2809 aa3.95□□□□□ -1.78
MTHFD1-202ENST00000545908 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
MTHFD1-202ENST00000545908 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
MTHFD1-202ENST00000545908 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
MTHFD1-202ENST00000545908 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
MTHFD1-202ENST00000545908 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
MTHFD1-202ENST00000545908 MT1HP80294 61 aa3.9□□□□□ -1.79
MTHFD1-202ENST00000545908 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
MTHFD1-202ENST00000545908 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
MTHFD1-202ENST00000545908 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
MTHFD1-202ENST00000545908 FRAS1Q86XX4 4008 aa3.87□□□□□ -1.79
MTHFD1-202ENST00000545908 LORP23490 312 aaPredicted RBP3.86□□□□□ -1.79
MTHFD1-202ENST00000545908 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
MTHFD1-202ENST00000545908 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
MTHFD1-202ENST00000545908 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
MTHFD1-202ENST00000545908 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
MTHFD1-202ENST00000545908 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
MTHFD1-202ENST00000545908 DYNC1H1Q14204 4646 aaKnown RBP3.8□□□□□ -1.8
MTHFD1-202ENST00000545908 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
MTHFD1-202ENST00000545908 LYSTQ99698 3801 aa3.76□□□□□ -1.81
MTHFD1-202ENST00000545908 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
MTHFD1-202ENST00000545908 MT2AP02795 61 aa3.74□□□□□ -1.81
MTHFD1-202ENST00000545908 MT1FP04733 61 aa3.67□□□□□ -1.82
MTHFD1-202ENST00000545908 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
MTHFD1-202ENST00000545908 KRTAP17-1Q9BYP8 105 aa3.65□□□□□ -1.82
MTHFD1-202ENST00000545908 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
MTHFD1-202ENST00000545908 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
MTHFD1-202ENST00000545908 HSPG2P98160 4391 aa3.62□□□□□ -1.83
MTHFD1-202ENST00000545908 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-202ENST00000545908 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
MTHFD1-202ENST00000545908 DNHD1Q96M86 4753 aa3.6□□□□□ -1.83
MTHFD1-202ENST00000545908 FAT1Q14517 4588 aa3.58□□□□□ -1.84
MTHFD1-202ENST00000545908 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
MTHFD1-202ENST00000545908 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
MTHFD1-202ENST00000545908 TNXBP22105 4242 aa3.49□□□□□ -1.85
MTHFD1-202ENST00000545908 SPRR2EP22531 72 aa3.49□□□□□ -1.85
MTHFD1-202ENST00000545908 SPRR2BP35325 72 aa3.49□□□□□ -1.85
MTHFD1-202ENST00000545908 SPRR2AP35326 72 aa3.49□□□□□ -1.85
MTHFD1-202ENST00000545908 PKD1P98161 4303 aa3.49□□□□□ -1.85
MTHFD1-202ENST00000545908 MUC17Q685J3 4493 aa3.43□□□□□ -1.86
MTHFD1-202ENST00000545908 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
MTHFD1-202ENST00000545908 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
MTHFD1-202ENST00000545908 RYR1P21817 5038 aa3.39□□□□□ -1.87
MTHFD1-202ENST00000545908 RYR3Q15413 4870 aa3.39□□□□□ -1.87
MTHFD1-202ENST00000545908 SPRR2DP22532 72 aa3.38□□□□□ -1.87
MTHFD1-202ENST00000545908 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
MTHFD1-202ENST00000545908 KRTAP9-8Q9BYQ0 159 aa3.37□□□□□ -1.87
MTHFD1-202ENST00000545908 LPAP08519 4548 aa3.37□□□□□ -1.87
MTHFD1-202ENST00000545908 KRTAP19-1Q8IUB9 90 aa3.36□□□□□ -1.87
MTHFD1-202ENST00000545908 HYDINQ4G0P3 5121 aa3.34□□□□□ -1.87
MTHFD1-202ENST00000545908 LCE2CQ5TA81 110 aa3.32□□□□□ -1.88
MTHFD1-202ENST00000545908 LRP1Q07954 4544 aaKnown RBP3.32□□□□□ -1.88
MTHFD1-202ENST00000545908 MT1XP80297 61 aa3.32□□□□□ -1.88
MTHFD1-202ENST00000545908 LCE2BO14633 110 aa3.31□□□□□ -1.88
MTHFD1-202ENST00000545908 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
MTHFD1-202ENST00000545908 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
MTHFD1-202ENST00000545908 MT1BP07438 61 aa3.3□□□□□ -1.88
MTHFD1-202ENST00000545908 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
MTHFD1-202ENST00000545908 RYR2Q92736 4967 aa3.28□□□□□ -1.89
MTHFD1-202ENST00000545908 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
MTHFD1-202ENST00000545908 HERC1Q15751 4861 aa3.26□□□□□ -1.89
MTHFD1-202ENST00000545908 KRTAP9-2Q9BYQ4 174 aa3.2□□□□□ -1.9
MTHFD1-202ENST00000545908 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
MTHFD1-202ENST00000545908 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
MTHFD1-202ENST00000545908 MT1GP13640 62 aa3.19□□□□□ -1.9
MTHFD1-202ENST00000545908 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
MTHFD1-202ENST00000545908 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
MTHFD1-202ENST00000545908 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
MTHFD1-202ENST00000545908 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
MTHFD1-202ENST00000545908 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
MTHFD1-202ENST00000545908 LCE2DQ5TA82 110 aaPredicted RBP3.1□□□□□ -1.91
MTHFD1-202ENST00000545908 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
MTHFD1-202ENST00000545908 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
MTHFD1-202ENST00000545908 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
MTHFD1-202ENST00000545908 HERC2O95714 4834 aa3.03□□□□□ -1.92
MTHFD1-202ENST00000545908 LRP2P98164 4655 aa3.02□□□□□ -1.93
MTHFD1-202ENST00000545908 MT1EP04732 61 aa2.99□□□□□ -1.93
MTHFD1-202ENST00000545908 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
MTHFD1-202ENST00000545908 MT1LQ93083 61 aa2.98□□□□□ -1.93
MTHFD1-202ENST00000545908 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
MTHFD1-202ENST00000545908 MT4P47944 62 aa2.97□□□□□ -1.93
MTHFD1-202ENST00000545908 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
MTHFD1-202ENST00000545908 MT3P25713 68 aa2.94□□□□□ -1.94
MTHFD1-202ENST00000545908 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-202ENST00000545908 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
MTHFD1-202ENST00000545908 MT1MQ8N339 61 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms