RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
BPTF-208ENST00000544778 CSMD3Q7Z407 3707 aa8.22□□□□□ -1.09
BPTF-208ENST00000544778 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
BPTF-208ENST00000544778 BSNQ9UPA5 3926 aa8.1□□□□□ -1.11
BPTF-208ENST00000544778 KRTAP10-7P60409 375 aaPredicted RBP8.04□□□□□ -1.12
BPTF-208ENST00000544778 SPRR2FQ96RM1 72 aa7.99□□□□□ -1.13
BPTF-208ENST00000544778 AKAP9Q99996 3911 aa7.98□□□□□ -1.13
BPTF-208ENST00000544778 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.13
BPTF-208ENST00000544778 MT1HP80294 61 aa7.85□□□□□ -1.15
BPTF-208ENST00000544778 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
BPTF-208ENST00000544778 DNAH1Q9P2D7 4330 aa7.73□□□□□ -1.17
BPTF-208ENST00000544778 KRTAP4-1Q9BYQ7 146 aa7.69□□□□□ -1.18
BPTF-208ENST00000544778 DNAH2Q9P225 4427 aa7.65□□□□□ -1.18
BPTF-208ENST00000544778 MT2AP02795 61 aa7.63□□□□□ -1.19
BPTF-208ENST00000544778 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
BPTF-208ENST00000544778 SPRR2EP22531 72 aa7.6□□□□□ -1.19
BPTF-208ENST00000544778 SPRR2BP35325 72 aa7.6□□□□□ -1.19
BPTF-208ENST00000544778 SPRR2AP35326 72 aa7.6□□□□□ -1.19
BPTF-208ENST00000544778 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
BPTF-208ENST00000544778 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
BPTF-208ENST00000544778 MT1FP04733 61 aa7.48□□□□□ -1.21
BPTF-208ENST00000544778 LCE3BQ5TA77 95 aa7.47□□□□□ -1.21
BPTF-208ENST00000544778 DNAH9Q9NYC9 4486 aa7.47□□□□□ -1.21
BPTF-208ENST00000544778 DNAH3Q8TD57 4116 aa7.45□□□□□ -1.22
BPTF-208ENST00000544778 SPRR2DP22532 72 aa7.34□□□□□ -1.23
BPTF-208ENST00000544778 ANK2Q01484 3957 aa7.31□□□□□ -1.24
BPTF-208ENST00000544778 DNAH10Q8IVF4 4471 aa7.3□□□□□ -1.24
BPTF-208ENST00000544778 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
BPTF-208ENST00000544778 FRAS1Q86XX4 4008 aa7.27□□□□□ -1.25
BPTF-208ENST00000544778 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
BPTF-208ENST00000544778 DNAH8Q96JB1 4490 aa7.26□□□□□ -1.25
BPTF-208ENST00000544778 LCE2BO14633 110 aa7.23□□□□□ -1.25
BPTF-208ENST00000544778 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.25
BPTF-208ENST00000544778 MT1GP13640 62 aa7.19□□□□□ -1.26
BPTF-208ENST00000544778 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
BPTF-208ENST00000544778 CMYA5Q8N3K9 4069 aa7.15□□□□□ -1.27
BPTF-208ENST00000544778 KMT2AQ03164 3969 aa7.14□□□□□ -1.27
BPTF-208ENST00000544778 DNAH17Q9UFH2 4485 aa7.14□□□□□ -1.27
BPTF-208ENST00000544778 DNAH11Q96DT5 4516 aa7.13□□□□□ -1.27
BPTF-208ENST00000544778 DNAH5Q8TE73 4624 aa7.12□□□□□ -1.27
BPTF-208ENST00000544778 DNAH6Q9C0G6 4158 aa7.07□□□□□ -1.28
BPTF-208ENST00000544778 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
BPTF-208ENST00000544778 LYSTQ99698 3801 aa7.05□□□□□ -1.28
BPTF-208ENST00000544778 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
BPTF-208ENST00000544778 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
BPTF-208ENST00000544778 PLECQ15149 4684 aaKnown RBP6.93□□□□□ -1.3
BPTF-208ENST00000544778 LCE3DQ9BYE3 92 aa6.88□□□□□ -1.31
BPTF-208ENST00000544778 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
BPTF-208ENST00000544778 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
BPTF-208ENST00000544778 FAT1Q14517 4588 aa6.84□□□□□ -1.31
BPTF-208ENST00000544778 LRP1BQ9NZR2 4599 aa6.83□□□□□ -1.32
BPTF-208ENST00000544778 MT1XP80297 61 aa6.82□□□□□ -1.32
BPTF-208ENST00000544778 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
BPTF-208ENST00000544778 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
BPTF-208ENST00000544778 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
BPTF-208ENST00000544778 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
BPTF-208ENST00000544778 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
BPTF-208ENST00000544778 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
BPTF-208ENST00000544778 LCE3EQ5T5B0 92 aa6.7□□□□□ -1.34
BPTF-208ENST00000544778 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
BPTF-208ENST00000544778 MT4P47944 62 aa6.62□□□□□ -1.35
BPTF-208ENST00000544778 MT1BP07438 61 aa6.58□□□□□ -1.36
BPTF-208ENST00000544778 SACSQ9NZJ4 4579 aa6.55□□□□□ -1.36
BPTF-208ENST00000544778 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
BPTF-208ENST00000544778 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
BPTF-208ENST00000544778 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
BPTF-208ENST00000544778 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
BPTF-208ENST00000544778 FAT3Q8TDW7 4589 aa6.46□□□□□ -1.37
BPTF-208ENST00000544778 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
BPTF-208ENST00000544778 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
BPTF-208ENST00000544778 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
BPTF-208ENST00000544778 LCE1BQ5T7P3 118 aa6.44□□□□□ -1.38
BPTF-208ENST00000544778 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
BPTF-208ENST00000544778 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
BPTF-208ENST00000544778 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
BPTF-208ENST00000544778 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
BPTF-208ENST00000544778 PKD1P98161 4303 aa6.35□□□□□ -1.39
BPTF-208ENST00000544778 PRM1P04553 51 aa6.34□□□□□ -1.39
BPTF-208ENST00000544778 KRTAP17-1Q9BYP8 105 aa6.28□□□□□ -1.4
BPTF-208ENST00000544778 MT1LQ93083 61 aa6.28□□□□□ -1.4
BPTF-208ENST00000544778 MT3P25713 68 aa6.28□□□□□ -1.4
BPTF-208ENST00000544778 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
BPTF-208ENST00000544778 RYR1P21817 5038 aa6.19□□□□□ -1.42
BPTF-208ENST00000544778 MT1EP04732 61 aa6.19□□□□□ -1.42
BPTF-208ENST00000544778 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
BPTF-208ENST00000544778 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
BPTF-208ENST00000544778 LPAP08519 4548 aa6.15□□□□□ -1.43
BPTF-208ENST00000544778 HSPG2P98160 4391 aa6.09□□□□□ -1.43
BPTF-208ENST00000544778 MT1MQ8N339 61 aa6.08□□□□□ -1.44
BPTF-208ENST00000544778 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
BPTF-208ENST00000544778 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
BPTF-208ENST00000544778 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
BPTF-208ENST00000544778 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
BPTF-208ENST00000544778 TNXBP22105 4242 aa5.96□□□□□ -1.45
BPTF-208ENST00000544778 RYR3Q15413 4870 aa5.91□□□□□ -1.46
BPTF-208ENST00000544778 KRTAP19-6Q3LI70 58 aa5.9□□□□□ -1.47
BPTF-208ENST00000544778 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
BPTF-208ENST00000544778 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
BPTF-208ENST00000544778 LCE1CQ5T751 118 aa5.73□□□□□ -1.49
BPTF-208ENST00000544778 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms