RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 MT1HL1P0DM35 61 aa3.46□□□□□ -1.86
ABCA13-207ENST00000544596 ALMS1Q8TCU4 4167 aa3.46□□□□□ -1.86
ABCA13-207ENST00000544596 KRTAP4-5Q9BYR2 181 aa3.46□□□□□ -1.86
ABCA13-207ENST00000544596 CSMD3Q7Z407 3707 aa3.43□□□□□ -1.86
ABCA13-207ENST00000544596 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
ABCA13-207ENST00000544596 ANK2Q01484 3957 aa3.41□□□□□ -1.86
ABCA13-207ENST00000544596 KRTAP3-2Q9BYR7 98 aa3.41□□□□□ -1.86
ABCA13-207ENST00000544596 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
ABCA13-207ENST00000544596 MEGF8Q7Z7M0 2845 aa3.4□□□□□ -1.87
ABCA13-207ENST00000544596 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
ABCA13-207ENST00000544596 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ABCA13-207ENST00000544596 DNAH3Q8TD57 4116 aa3.32□□□□□ -1.88
ABCA13-207ENST00000544596 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
ABCA13-207ENST00000544596 KMT2AQ03164 3969 aa3.3□□□□□ -1.88
ABCA13-207ENST00000544596 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
ABCA13-207ENST00000544596 LYSTQ99698 3801 aa3.24□□□□□ -1.89
ABCA13-207ENST00000544596 PLECQ15149 4684 aaKnown RBP3.22□□□□□ -1.89
ABCA13-207ENST00000544596 DNAH10Q8IVF4 4471 aa3.22□□□□□ -1.89
ABCA13-207ENST00000544596 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
ABCA13-207ENST00000544596 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
ABCA13-207ENST00000544596 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
ABCA13-207ENST00000544596 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
ABCA13-207ENST00000544596 STARD9Q9P2P6 4700 aa3.18□□□□□ -1.9
ABCA13-207ENST00000544596 FRAS1Q86XX4 4008 aa3.16□□□□□ -1.9
ABCA13-207ENST00000544596 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.91
ABCA13-207ENST00000544596 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.91
ABCA13-207ENST00000544596 VPS13BQ7Z7G8 4022 aa3.14□□□□□ -1.91
ABCA13-207ENST00000544596 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
ABCA13-207ENST00000544596 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
ABCA13-207ENST00000544596 MT1HP80294 61 aa3.13□□□□□ -1.91
ABCA13-207ENST00000544596 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
ABCA13-207ENST00000544596 SPRR2EP22531 72 aa3.13□□□□□ -1.91
ABCA13-207ENST00000544596 SPRR2BP35325 72 aa3.13□□□□□ -1.91
ABCA13-207ENST00000544596 SPRR2AP35326 72 aa3.13□□□□□ -1.91
ABCA13-207ENST00000544596 DNAH17Q9UFH2 4485 aa3.12□□□□□ -1.91
ABCA13-207ENST00000544596 DNAH11Q96DT5 4516 aa3.08□□□□□ -1.92
ABCA13-207ENST00000544596 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
ABCA13-207ENST00000544596 DNHD1Q96M86 4753 aa3.08□□□□□ -1.92
ABCA13-207ENST00000544596 MT2AP02795 61 aa3.07□□□□□ -1.92
ABCA13-207ENST00000544596 DNAH5Q8TE73 4624 aa3.07□□□□□ -1.92
ABCA13-207ENST00000544596 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
ABCA13-207ENST00000544596 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
ABCA13-207ENST00000544596 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
ABCA13-207ENST00000544596 SPRR2DP22532 72 aa3.03□□□□□ -1.93
ABCA13-207ENST00000544596 MT1FP04733 61 aa3□□□□□ -1.93
ABCA13-207ENST00000544596 SPRR2GQ9BYE4 73 aa2.98□□□□□ -1.93
ABCA13-207ENST00000544596 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
ABCA13-207ENST00000544596 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
ABCA13-207ENST00000544596 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
ABCA13-207ENST00000544596 LCE2BO14633 110 aa2.96□□□□□ -1.94
ABCA13-207ENST00000544596 DYNC1H1Q14204 4646 aaKnown RBP2.95□□□□□ -1.94
ABCA13-207ENST00000544596 MT1GP13640 62 aa2.94□□□□□ -1.94
ABCA13-207ENST00000544596 SACSQ9NZJ4 4579 aa2.94□□□□□ -1.94
ABCA13-207ENST00000544596 MT3P25713 68 aa2.93□□□□□ -1.94
ABCA13-207ENST00000544596 FAT1Q14517 4588 aa2.93□□□□□ -1.94
ABCA13-207ENST00000544596 HSPG2P98160 4391 aa2.9□□□□□ -1.95
ABCA13-207ENST00000544596 PKD1P98161 4303 aa2.88□□□□□ -1.95
ABCA13-207ENST00000544596 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
ABCA13-207ENST00000544596 KRTAP17-1Q9BYP8 105 aa2.86□□□□□ -1.95
ABCA13-207ENST00000544596 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
ABCA13-207ENST00000544596 LCE2CQ5TA81 110 aa2.84□□□□□ -1.96
ABCA13-207ENST00000544596 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
ABCA13-207ENST00000544596 HYDINQ4G0P3 5121 aa2.81□□□□□ -1.96
ABCA13-207ENST00000544596 LCE2DQ5TA82 110 aaPredicted RBP2.81□□□□□ -1.96
ABCA13-207ENST00000544596 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
ABCA13-207ENST00000544596 TNXBP22105 4242 aa2.79□□□□□ -1.96
ABCA13-207ENST00000544596 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
ABCA13-207ENST00000544596 LRP1Q07954 4544 aaKnown RBP2.78□□□□□ -1.96
ABCA13-207ENST00000544596 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
ABCA13-207ENST00000544596 RYR1P21817 5038 aa2.76□□□□□ -1.97
ABCA13-207ENST00000544596 KRTAP4-8A0A0G2JLE6 195 aa2.76□□□□□ -1.97
ABCA13-207ENST00000544596 KRTAP4-8Q9BYQ9 185 aa2.76□□□□□ -1.97
ABCA13-207ENST00000544596 MT4P47944 62 aa2.75□□□□□ -1.97
ABCA13-207ENST00000544596 RYR3Q15413 4870 aa2.75□□□□□ -1.97
ABCA13-207ENST00000544596 FAT3Q8TDW7 4589 aa2.73□□□□□ -1.97
ABCA13-207ENST00000544596 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
ABCA13-207ENST00000544596 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
ABCA13-207ENST00000544596 MT1XP80297 61 aa2.7□□□□□ -1.98
ABCA13-207ENST00000544596 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
ABCA13-207ENST00000544596 LPAP08519 4548 aa2.69□□□□□ -1.98
ABCA13-207ENST00000544596 RYR2Q92736 4967 aa2.69□□□□□ -1.98
ABCA13-207ENST00000544596 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
ABCA13-207ENST00000544596 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
ABCA13-207ENST00000544596 KMT2CQ8NEZ4 4911 aaKnown RBP2.65□□□□□ -1.98
ABCA13-207ENST00000544596 MT1BP07438 61 aa2.61□□□□□ -1.99
ABCA13-207ENST00000544596 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
ABCA13-207ENST00000544596 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
ABCA13-207ENST00000544596 PRM1P04553 51 aa2.6□□□□□ -1.99
ABCA13-207ENST00000544596 KIAA1109Q2LD37 5005 aa2.59□□□□□ -1.99
ABCA13-207ENST00000544596 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
ABCA13-207ENST00000544596 HERC2O95714 4834 aa2.56□□□□□ -2
ABCA13-207ENST00000544596 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
ABCA13-207ENST00000544596 LRP2P98164 4655 aa2.55□□□□□ -2
ABCA13-207ENST00000544596 KRTAP9-8Q9BYQ0 159 aa2.55□□□□□ -2
ABCA13-207ENST00000544596 BIRC6Q9NR09 4857 aa2.54□□□□□ -2
ABCA13-207ENST00000544596 MUC17Q685J3 4493 aa2.52□□□□□ -2.01
ABCA13-207ENST00000544596 KRTAP9-3Q9BYQ3 159 aa2.51□□□□□ -2.01
ABCA13-207ENST00000544596 MT1LQ93083 61 aa2.51□□□□□ -2.01
ABCA13-207ENST00000544596 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
ABCA13-207ENST00000544596 MT1EP04732 61 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms