RNA–Protein interactions for RNA: ENST00000543283.2

CCSER2-210, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2 BASIC

Gene CCSER2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-210ENST00000543283 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
CCSER2-210ENST00000543283 KRTAP19-4Q3LI73 84 aa2.11□□□□□ -2.07
CCSER2-210ENST00000543283 KRTAP4-5Q9BYR2 181 aa2.11□□□□□ -2.07
CCSER2-210ENST00000543283 PKD1L1Q8TDX9 2849 aa2.11□□□□□ -2.07
CCSER2-210ENST00000543283 KRTAP3-3Q9BYR6 98 aa2.1□□□□□ -2.07
CCSER2-210ENST00000543283 KRTAP3-2Q9BYR7 98 aa2.1□□□□□ -2.07
CCSER2-210ENST00000543283 MT3P25713 68 aa2.1□□□□□ -2.07
CCSER2-210ENST00000543283 HUWE1Q7Z6Z7 4374 aaKnown RBP2.09□□□□□ -2.08
CCSER2-210ENST00000543283 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
CCSER2-210ENST00000543283 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
CCSER2-210ENST00000543283 DNAH7Q8WXX0 4024 aa2.08□□□□□ -2.08
CCSER2-210ENST00000543283 DNAH9Q9NYC9 4486 aa2.08□□□□□ -2.08
CCSER2-210ENST00000543283 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
CCSER2-210ENST00000543283 VPS13DQ5THJ4 4388 aa2.05□□□□□ -2.08
CCSER2-210ENST00000543283 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
CCSER2-210ENST00000543283 FBN3Q75N90 2809 aa2.04□□□□□ -2.08
CCSER2-210ENST00000543283 PKHD1L1Q86WI1 4243 aa2.04□□□□□ -2.08
CCSER2-210ENST00000543283 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
CCSER2-210ENST00000543283 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.09
CCSER2-210ENST00000543283 FBN1P35555 2871 aaKnown RBP2.02□□□□□ -2.09
CCSER2-210ENST00000543283 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
CCSER2-210ENST00000543283 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
CCSER2-210ENST00000543283 PLECQ15149 4684 aaKnown RBP2.01□□□□□ -2.09
CCSER2-210ENST00000543283 COL7A1Q02388 2944 aa2.01□□□□□ -2.09
CCSER2-210ENST00000543283 SRRM2Q9UQ35 2752 aaKnown RBP2.01□□□□□ -2.09
CCSER2-210ENST00000543283 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
CCSER2-210ENST00000543283 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
CCSER2-210ENST00000543283 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 DNAH2Q9P225 4427 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 DNAH11Q96DT5 4516 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 STARD9Q9P2P6 4700 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 FRAS1Q86XX4 4008 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 LORP23490 312 aaPredicted RBP1.98□□□□□ -2.09
CCSER2-210ENST00000543283 RYR2Q92736 4967 aa1.98□□□□□ -2.09
CCSER2-210ENST00000543283 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
CCSER2-210ENST00000543283 DNHD1Q96M86 4753 aa1.97□□□□□ -2.09
CCSER2-210ENST00000543283 MT1HP80294 61 aa1.95□□□□□ -2.1
CCSER2-210ENST00000543283 MEGF8Q7Z7M0 2845 aa1.94□□□□□ -2.1
CCSER2-210ENST00000543283 SACSQ9NZJ4 4579 aa1.94□□□□□ -2.1
CCSER2-210ENST00000543283 PKHD1P08F94 4074 aa1.94□□□□□ -2.1
CCSER2-210ENST00000543283 DNAH5Q8TE73 4624 aa1.93□□□□□ -2.1
CCSER2-210ENST00000543283 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
CCSER2-210ENST00000543283 TNXBP22105 4242 aa1.92□□□□□ -2.1
CCSER2-210ENST00000543283 BIRC6Q9NR09 4857 aa1.92□□□□□ -2.1
CCSER2-210ENST00000543283 PKD1P98161 4303 aa1.91□□□□□ -2.1
CCSER2-210ENST00000543283 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
CCSER2-210ENST00000543283 MT2AP02795 61 aa1.91□□□□□ -2.1
CCSER2-210ENST00000543283 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
CCSER2-210ENST00000543283 SPRR2GQ9BYE4 73 aa1.89□□□□□ -2.11
CCSER2-210ENST00000543283 FAT1Q14517 4588 aa1.89□□□□□ -2.11
CCSER2-210ENST00000543283 HERC2O95714 4834 aa1.89□□□□□ -2.11
CCSER2-210ENST00000543283 APOBP04114 4563 aaKnown RBP1.88□□□□□ -2.11
CCSER2-210ENST00000543283 HSPG2P98160 4391 aa1.88□□□□□ -2.11
CCSER2-210ENST00000543283 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
CCSER2-210ENST00000543283 RYR1P21817 5038 aa1.87□□□□□ -2.11
CCSER2-210ENST00000543283 HYDINQ4G0P3 5121 aa1.86□□□□□ -2.11
CCSER2-210ENST00000543283 MYCBP2O75592 4640 aa1.85□□□□□ -2.11
CCSER2-210ENST00000543283 RYR3Q15413 4870 aa1.85□□□□□ -2.11
CCSER2-210ENST00000543283 MT1FP04733 61 aa1.85□□□□□ -2.11
CCSER2-210ENST00000543283 LOC100996750A0A140TA64 210 aa1.84□□□□□ -2.11
CCSER2-210ENST00000543283 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.11
CCSER2-210ENST00000543283 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
CCSER2-210ENST00000543283 LCE3CQ5T5A8 94 aa1.82□□□□□ -2.12
CCSER2-210ENST00000543283 OBSCNQ5VST9 7968 aa1.81□□□□□ -2.12
CCSER2-210ENST00000543283 HERC1Q15751 4861 aa1.81□□□□□ -2.12
CCSER2-210ENST00000543283 MUC17Q685J3 4493 aa1.8□□□□□ -2.12
CCSER2-210ENST00000543283 SPRR2EP22531 72 aa1.8□□□□□ -2.12
CCSER2-210ENST00000543283 SPRR2BP35325 72 aa1.8□□□□□ -2.12
CCSER2-210ENST00000543283 SPRR2AP35326 72 aa1.8□□□□□ -2.12
CCSER2-210ENST00000543283 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
CCSER2-210ENST00000543283 KMT2CQ8NEZ4 4911 aaKnown RBP1.76□□□□□ -2.13
CCSER2-210ENST00000543283 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
CCSER2-210ENST00000543283 SPRR2DP22532 72 aa1.75□□□□□ -2.13
CCSER2-210ENST00000543283 KIAA1109Q2LD37 5005 aa1.73□□□□□ -2.13
CCSER2-210ENST00000543283 LRP1Q07954 4544 aaKnown RBP1.73□□□□□ -2.13
CCSER2-210ENST00000543283 LCE2BO14633 110 aa1.72□□□□□ -2.13
CCSER2-210ENST00000543283 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
CCSER2-210ENST00000543283 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
CCSER2-210ENST00000543283 KRTAP19-1Q8IUB9 90 aa1.7□□□□□ -2.14
CCSER2-210ENST00000543283 MT1XP80297 61 aa1.69□□□□□ -2.14
CCSER2-210ENST00000543283 LCE3BQ5TA77 95 aa1.69□□□□□ -2.14
CCSER2-210ENST00000543283 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
CCSER2-210ENST00000543283 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
CCSER2-210ENST00000543283 MT1GP13640 62 aa1.67□□□□□ -2.14
CCSER2-210ENST00000543283 MT1BP07438 61 aa1.67□□□□□ -2.14
CCSER2-210ENST00000543283 EPPK1P58107 5090 aaKnown RBP1.67□□□□□ -2.14
CCSER2-210ENST00000543283 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
CCSER2-210ENST00000543283 KRTAP9-8Q9BYQ0 159 aa1.66□□□□□ -2.14
CCSER2-210ENST00000543283 KRTAP9-3Q9BYQ3 159 aa1.64□□□□□ -2.15
CCSER2-210ENST00000543283 HMCN2Q8NDA2 5059 aa1.64□□□□□ -2.15
CCSER2-210ENST00000543283 LPAP08519 4548 aa1.62□□□□□ -2.15
CCSER2-210ENST00000543283 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP19-2Q3LHN2 52 aa1.61□□□□□ -2.15
CCSER2-210ENST00000543283 LCE2CQ5TA81 110 aa1.61□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP4-8A0A0G2JLE6 195 aa1.6□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP4-8Q9BYQ9 185 aa1.6□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
CCSER2-210ENST00000543283 LCE2AQ5TA79 106 aaPredicted RBP1.6□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
CCSER2-210ENST00000543283 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms