RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 PRR15Q8IV56 129 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 PRO0461Q9UI25 63 aa1.96□□□□□ -2.1
LIMS1-214ENST00000542845 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
LIMS1-214ENST00000542845 APOC3P02656 99 aa1.95□□□□□ -2.1
LIMS1-214ENST00000542845 BATFQ16520 125 aa1.95□□□□□ -2.1
LIMS1-214ENST00000542845 KRTAP12-2P59991 146 aa1.94□□□□□ -2.1
LIMS1-214ENST00000542845 LINC01545Q5VT33 79 aa1.94□□□□□ -2.1
LIMS1-214ENST00000542845 ATOH7Q8N100 152 aa1.94□□□□□ -2.1
LIMS1-214ENST00000542845 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
LIMS1-214ENST00000542845 H3BQ85 93 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 J3KT08 172 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 C7orf65Q6ZTY9 151 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 C2orf91Q6ZV80 131 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 ADM2Q7Z4H4 148 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
LIMS1-214ENST00000542845 H0YGX0 51 aa1.92□□□□□ -2.1
LIMS1-214ENST00000542845 KRTDAPP60985 99 aa1.92□□□□□ -2.1
LIMS1-214ENST00000542845 C1orf64Q8NEQ6 169 aa1.92□□□□□ -2.1
LIMS1-214ENST00000542845 PDE6GP18545 87 aa1.91□□□□□ -2.1
LIMS1-214ENST00000542845 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
LIMS1-214ENST00000542845 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
LIMS1-214ENST00000542845 A8MUN3 132 aa1.89□□□□□ -2.11
LIMS1-214ENST00000542845 K7EQZ3 153 aa1.89□□□□□ -2.11
LIMS1-214ENST00000542845 NDUFA5Q16718 116 aa1.89□□□□□ -2.11
LIMS1-214ENST00000542845 SVBPQ8N300 66 aa1.89□□□□□ -2.11
LIMS1-214ENST00000542845 DNAL4O96015 105 aa1.88□□□□□ -2.11
LIMS1-214ENST00000542845 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
LIMS1-214ENST00000542845 ORMDL1Q9P0S3 153 aa1.88□□□□□ -2.11
LIMS1-214ENST00000542845 R4GN34 69 aa1.88□□□□□ -2.11
LIMS1-214ENST00000542845 A0A1B0GX51 115 aa1.87□□□□□ -2.11
LIMS1-214ENST00000542845 TMEM256-PLSCR3K7ERE1 68 aa1.87□□□□□ -2.11
LIMS1-214ENST00000542845 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
LIMS1-214ENST00000542845 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
LIMS1-214ENST00000542845 TMEM254Q8TBM7 123 aa1.87□□□□□ -2.11
LIMS1-214ENST00000542845 MMP24-AS1A0A0U1RRL7 71 aa1.86□□□□□ -2.11
LIMS1-214ENST00000542845 hDV103S1A0JD37 113 aa1.86□□□□□ -2.11
LIMS1-214ENST00000542845 Q6ZQT0 140 aa1.86□□□□□ -2.11
LIMS1-214ENST00000542845 C9JAW5 83 aa1.84□□□□□ -2.11
LIMS1-214ENST00000542845 A0A087WVE0 104 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BKO60814 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BJP06899 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BOP23527 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BBP33778 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BDP58876 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BCP62807 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST2H2BEQ16778 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BHQ93079 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BNQ99877 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HIST1H2BMQ99879 126 aa1.83□□□□□ -2.12
LIMS1-214ENST00000542845 HCG22E2RYF7 251 aa1.82□□□□□ -2.12
LIMS1-214ENST00000542845 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
LIMS1-214ENST00000542845 CYSTM1Q9H1C7 97 aa1.82□□□□□ -2.12
LIMS1-214ENST00000542845 PRO1854Q9UHT4 67 aa1.82□□□□□ -2.12
LIMS1-214ENST00000542845 A0A1B0GU33 70 aa1.81□□□□□ -2.12
LIMS1-214ENST00000542845 H0YAA0 97 aa1.81□□□□□ -2.12
LIMS1-214ENST00000542845 NREPQ16612 68 aa1.81□□□□□ -2.12
LIMS1-214ENST00000542845 A0A1B0GW54 56 aa1.8□□□□□ -2.12
LIMS1-214ENST00000542845 H3BPC8 53 aa1.8□□□□□ -2.12
LIMS1-214ENST00000542845 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
LIMS1-214ENST00000542845 M0QZ58 72 aa1.78□□□□□ -2.12
LIMS1-214ENST00000542845 NDUFC1O43677 76 aa1.78□□□□□ -2.12
LIMS1-214ENST00000542845 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
LIMS1-214ENST00000542845 COX6CP09669 75 aa1.77□□□□□ -2.13
LIMS1-214ENST00000542845 BAALC-AS2P0C853 105 aa1.77□□□□□ -2.13
LIMS1-214ENST00000542845 H3BT86 120 aa1.76□□□□□ -2.13
LIMS1-214ENST00000542845 MT1EP04732 61 aa1.76□□□□□ -2.13
LIMS1-214ENST00000542845 COX8AP10176 69 aa1.76□□□□□ -2.13
LIMS1-214ENST00000542845 C14orf144Q96I85 54 aa1.76□□□□□ -2.13
LIMS1-214ENST00000542845 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
LIMS1-214ENST00000542845 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
LIMS1-214ENST00000542845 K7ERJ3 54 aa1.74□□□□□ -2.13
LIMS1-214ENST00000542845 FXYD2P54710 66 aa1.74□□□□□ -2.13
LIMS1-214ENST00000542845 HIST3H2BBQ8N257 126 aa1.74□□□□□ -2.13
LIMS1-214ENST00000542845 C14orf132Q9NPU4 83 aa1.74□□□□□ -2.13
LIMS1-214ENST00000542845 JMJD7-PLA2G4BH0Y9G9 81 aa1.73□□□□□ -2.13
LIMS1-214ENST00000542845 K7EP34 96 aa1.73□□□□□ -2.13
LIMS1-214ENST00000542845 P0C880 135 aa1.73□□□□□ -2.13
LIMS1-214ENST00000542845 MT1GP13640 62 aa1.73□□□□□ -2.13
LIMS1-214ENST00000542845 HIST1H4AP62805 103 aaKnown RBP1.73□□□□□ -2.13
LIMS1-214ENST00000542845 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
LIMS1-214ENST00000542845 LOC110117498A0A087WWA1 95 aa1.72□□□□□ -2.13
LIMS1-214ENST00000542845 DLEU1O43261 78 aa1.72□□□□□ -2.13
LIMS1-214ENST00000542845 TMEM258P61165 79 aa1.72□□□□□ -2.13
LIMS1-214ENST00000542845 HIGD1BQ9P298 99 aa1.72□□□□□ -2.13
LIMS1-214ENST00000542845 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
LIMS1-214ENST00000542845 HIST1H2BLQ99880 126 aa1.71□□□□□ -2.14
LIMS1-214ENST00000542845 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
LIMS1-214ENST00000542845 MT-ATP8P03928 68 aa1.7□□□□□ -2.14
LIMS1-214ENST00000542845 MT1MQ8N339 61 aa1.7□□□□□ -2.14
LIMS1-214ENST00000542845 TRAV7A0A075B6U4 112 aa1.69□□□□□ -2.14
LIMS1-214ENST00000542845 SPATA45Q537H7 98 aa1.69□□□□□ -2.14
LIMS1-214ENST00000542845 C20orf197Q8N268 126 aa1.69□□□□□ -2.14
LIMS1-214ENST00000542845 ACYP1P07311 99 aa1.68□□□□□ -2.14
LIMS1-214ENST00000542845 ATXN8Q156A1 80 aa1.68□□□□□ -2.14
LIMS1-214ENST00000542845 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
LIMS1-214ENST00000542845 CYP4F30PQ9H0H9 118 aa1.68□□□□□ -2.14
LIMS1-214ENST00000542845 A0A1W2PPM0 123 aa1.67□□□□□ -2.14
LIMS1-214ENST00000542845 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
LIMS1-214ENST00000542845 SMIM20Q8N5G0 67 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms