RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 TRBV7-4A0A0J9YYF1 115 aa-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 SNRPGP62308 76 aaKnown RBP-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 HMGN3Q15651 99 aa-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 LINC01590Q5TEZ4 76 aa-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 MRPL54Q6P161 138 aaKnown RBP-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 ARHGAP5-AS1Q96IT6 56 aa-0.44□□□□□ -2.48
KNTC1-212ENST00000541466 LOC100130705A0A1B0GUX0 176 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 APOC2P02655 101 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 C3orf79P0CE67 100 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 FGF7P21781 194 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 S100A10P60903 97 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 CATR1Q13166 79 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 CCDC58Q4VC31 144 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 ABRACLQ9P1F3 81 aa-0.45□□□□□ -2.48
KNTC1-212ENST00000541466 CHKB-CPT1BH3BT56 60 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 CORTO00230 105 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 IFNGP01579 166 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 WHAMMP3Q1A5X7 153 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 C10orf113Q5VZT2 155 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 NXT2Q9NPJ8 142 aaKnown RBP-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 CDC42SE2Q9NRR3 84 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 UQCR10Q9UDW1 63 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 ARL2-SNX15V9GYD0 113 aa-0.46□□□□□ -2.48
KNTC1-212ENST00000541466 MT-ATP8P03928 68 aa-0.47□□□□□ -2.48
KNTC1-212ENST00000541466 DEFB105AQ8NG35 78 aa-0.47□□□□□ -2.48
KNTC1-212ENST00000541466 PP6455Q8WZ26 134 aa-0.47□□□□□ -2.48
KNTC1-212ENST00000541466 TSC22D3Q99576 134 aa-0.47□□□□□ -2.48
KNTC1-212ENST00000541466 IGLV5-48A0A075B6I7 105 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 ETDCA0A1B0GVM5 59 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 CPSF4LA6NMK7 179 aaKnown RBP-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 SNRPGP15A8MWD9 76 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 SYS1-DBNDD2H3BUS1 97 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 SNAPC5O75971 98 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 COX8AP10176 69 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 FAM167A-AS1Q96KT0 104 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 KCNQ1DNQ9H478 68 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 IER3IP1Q9Y5U9 82 aa-0.48□□□□□ -2.49
KNTC1-212ENST00000541466 TRBV7-7A0A0K0K1E9 115 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 UBE2L5PA0A1B0GUS4 154 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 D6R8Y8 96 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 CRIP1P50238 77 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 UBE2L3P68036 154 aaKnown RBP-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 S100A12P80511 92 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 C1orf54Q8WWF1 131 aa-0.49□□□□□ -2.49
KNTC1-212ENST00000541466 TNP1P09430 55 aa-0.5□□□□□ -2.49
KNTC1-212ENST00000541466 AKAIN1P0CW23 69 aa-0.5□□□□□ -2.49
KNTC1-212ENST00000541466 IAPPP10997 89 aa-0.5□□□□□ -2.49
KNTC1-212ENST00000541466 SNCAP37840 140 aa-0.5□□□□□ -2.49
KNTC1-212ENST00000541466 ATP5EP56381 51 aaPredicted RBP-0.5□□□□□ -2.49
KNTC1-212ENST00000541466 TRAV21A0A0B4J279 112 aa-0.51□□□□□ -2.49
KNTC1-212ENST00000541466 F6UZH7 168 aa-0.51□□□□□ -2.49
KNTC1-212ENST00000541466 GNG11P61952 73 aa-0.51□□□□□ -2.49
KNTC1-212ENST00000541466 FAM107BQ9H098 131 aa-0.51□□□□□ -2.49
KNTC1-212ENST00000541466 MANBALQ9NQG1 85 aa-0.51□□□□□ -2.49
KNTC1-212ENST00000541466 NDUFC1O43677 76 aa-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 HMGN1P05114 100 aa-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 COX6CP09669 75 aa-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 IGLC2P0DOY2 106 aa-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 RPL38P63173 70 aaKnown RBP-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 C9orf62Q8N4C0 152 aa-0.52□□□□□ -2.49
KNTC1-212ENST00000541466 H3BQ15 152 aa-0.53□□□□□ -2.49
KNTC1-212ENST00000541466 TRGV9Q99603 122 aa-0.53□□□□□ -2.49
KNTC1-212ENST00000541466 PRO1854Q9UHT4 67 aa-0.53□□□□□ -2.49
KNTC1-212ENST00000541466 MMP24-AS1A0A0U1RRL7 71 aa-0.54□□□□□ -2.5
KNTC1-212ENST00000541466 NAP1L6A6NFF2 107 aa-0.54□□□□□ -2.5
KNTC1-212ENST00000541466 M0QY20 66 aa-0.54□□□□□ -2.5
KNTC1-212ENST00000541466 SEC11AP67812 179 aa-0.54□□□□□ -2.5
KNTC1-212ENST00000541466 SFTA2Q6UW10 78 aa-0.54□□□□□ -2.5
KNTC1-212ENST00000541466 RPL13AP3Q6NVV1 102 aa-0.55□□□□□ -2.5
KNTC1-212ENST00000541466 C12orf57Q99622 126 aa-0.55□□□□□ -2.5
KNTC1-212ENST00000541466 A0A1B0GU69 56 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 H3BQF6 201 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 H3BVH4 76 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 ARMS2P0C7Q2 107 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 NMSQ5H8A3 153 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 SVBPQ8N300 66 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 S100A13Q99584 98 aa-0.56□□□□□ -2.5
KNTC1-212ENST00000541466 LINC00032P0C843 101 aa-0.57□□□□□ -2.5
KNTC1-212ENST00000541466 S100PP25815 95 aa-0.57□□□□□ -2.5
KNTC1-212ENST00000541466 GNG4P50150 75 aa-0.57□□□□□ -2.5
KNTC1-212ENST00000541466 H7BZZ5 65 aa-0.58□□□□□ -2.5
KNTC1-212ENST00000541466 I3L3M4 83 aa-0.58□□□□□ -2.5
KNTC1-212ENST00000541466 PPP3R1P63098 170 aa-0.58□□□□□ -2.5
KNTC1-212ENST00000541466 SMIM2Q9BVW6 85 aa-0.58□□□□□ -2.5
KNTC1-212ENST00000541466 TOMM7Q9P0U1 55 aa-0.58□□□□□ -2.5
KNTC1-212ENST00000541466 DLEU1O43261 78 aa-0.59□□□□□ -2.5
KNTC1-212ENST00000541466 KRTDAPP60985 99 aa-0.59□□□□□ -2.5
KNTC1-212ENST00000541466 CMC2Q9NRP2 79 aa-0.59□□□□□ -2.5
KNTC1-212ENST00000541466 EFCAB10A6NFE3 127 aa-0.6□□□□□ -2.51
KNTC1-212ENST00000541466 POLR2KP53803 58 aaKnown RBP-0.6□□□□□ -2.51
KNTC1-212ENST00000541466 MRPL34Q9BQ48 92 aaKnown RBP-0.6□□□□□ -2.51
KNTC1-212ENST00000541466 VAMP8Q9BV40 100 aa-0.6□□□□□ -2.51
KNTC1-212ENST00000541466 CDKN2A-AS1Q9UH64 79 aa-0.6□□□□□ -2.51
KNTC1-212ENST00000541466 A0A0G2JND7 137 aa-0.61□□□□□ -2.51
KNTC1-212ENST00000541466 A0A1B0GV90 55 aa-0.61□□□□□ -2.51
KNTC1-212ENST00000541466 C7orf77A4D0Y5 90 aa-0.61□□□□□ -2.51
KNTC1-212ENST00000541466 MRPS10P82664 201 aaKnown RBP-0.61□□□□□ -2.51
KNTC1-212ENST00000541466 HSD52Q0P140 79 aa-0.61□□□□□ -2.51
KNTC1-212ENST00000541466 H0Y9P7 68 aa-0.62□□□□□ -2.51
KNTC1-212ENST00000541466 S100A1P23297 94 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms