RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 A0A1B0GU69 56 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 LINC00959A0A1B0GUT2 108 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 SNRPGP15A8MWD9 76 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 HAMPP81172 84 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 GAFA1Q96PS6 74 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
AC055720.1-201ENST00000539552 LINC01549A6NIU2 74 aa1.65□□□□□ -2.15
AC055720.1-201ENST00000539552 RPL37P61927 97 aaKnown RBP1.65□□□□□ -2.15
AC055720.1-201ENST00000539552 LYNX1G3V0Z9 82 aa1.64□□□□□ -2.15
AC055720.1-201ENST00000539552 LYNX1P0DP58 116 aa1.64□□□□□ -2.15
AC055720.1-201ENST00000539552 COX14Q96I36 57 aa1.63□□□□□ -2.15
AC055720.1-201ENST00000539552 FXYD6Q9H0Q3 95 aa1.63□□□□□ -2.15
AC055720.1-201ENST00000539552 NCBP2-AS2Q69YL0 99 aa1.62□□□□□ -2.15
AC055720.1-201ENST00000539552 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
AC055720.1-201ENST00000539552 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
AC055720.1-201ENST00000539552 SSBP3-AS1Q7Z2R9 100 aa1.61□□□□□ -2.15
AC055720.1-201ENST00000539552 DEFB106AQ8N104 65 aa1.61□□□□□ -2.15
AC055720.1-201ENST00000539552 COX7BP24311 80 aa1.6□□□□□ -2.15
AC055720.1-201ENST00000539552 ENHOQ6UWT2 76 aa1.6□□□□□ -2.15
AC055720.1-201ENST00000539552 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
AC055720.1-201ENST00000539552 NDUFA4O00483 81 aa1.57□□□□□ -2.16
AC055720.1-201ENST00000539552 UBE2DNLQ8IWF7 75 aa1.57□□□□□ -2.16
AC055720.1-201ENST00000539552 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
AC055720.1-201ENST00000539552 CCL22O00626 93 aa1.55□□□□□ -2.16
AC055720.1-201ENST00000539552 FXYD6P3P58550 94 aa1.55□□□□□ -2.16
AC055720.1-201ENST00000539552 MT1HP80294 61 aa1.55□□□□□ -2.16
AC055720.1-201ENST00000539552 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
AC055720.1-201ENST00000539552 RPS27LQ71UM5 84 aaKnown RBP1.55□□□□□ -2.16
AC055720.1-201ENST00000539552 CPSF4LA6NMK7 179 aaKnown RBP1.54□□□□□ -2.16
AC055720.1-201ENST00000539552 FCER1GP30273 86 aa1.54□□□□□ -2.16
AC055720.1-201ENST00000539552 RPL38P63173 70 aaKnown RBP1.54□□□□□ -2.16
AC055720.1-201ENST00000539552 KRTAP19-6Q3LI70 58 aa1.54□□□□□ -2.16
AC055720.1-201ENST00000539552 DEFB114Q30KQ6 69 aa1.52□□□□□ -2.17
AC055720.1-201ENST00000539552 ANGP03950 147 aaKnown RBP1.51□□□□□ -2.17
AC055720.1-201ENST00000539552 KRTAP13-1Q8IUC0 172 aa1.51□□□□□ -2.17
AC055720.1-201ENST00000539552 KCNQ1DNQ9H478 68 aa1.51□□□□□ -2.17
AC055720.1-201ENST00000539552 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
AC055720.1-201ENST00000539552 NMES1Q9C002 83 aa1.5□□□□□ -2.17
AC055720.1-201ENST00000539552 K7EMI3 77 aa1.49□□□□□ -2.17
AC055720.1-201ENST00000539552 SNRPGP62308 76 aaKnown RBP1.49□□□□□ -2.17
AC055720.1-201ENST00000539552 SERF2P84101 59 aa1.49□□□□□ -2.17
AC055720.1-201ENST00000539552 CMC2Q9NRP2 79 aa1.49□□□□□ -2.17
AC055720.1-201ENST00000539552 ETDCA0A1B0GVM5 59 aa1.48□□□□□ -2.17
AC055720.1-201ENST00000539552 PRH1P02810 166 aa1.48□□□□□ -2.17
AC055720.1-201ENST00000539552 TOMM5Q8N4H5 51 aa1.48□□□□□ -2.17
AC055720.1-201ENST00000539552 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
AC055720.1-201ENST00000539552 I3L2K1 104 aa1.47□□□□□ -2.17
AC055720.1-201ENST00000539552 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
AC055720.1-201ENST00000539552 TP53AIP1Q9HCN2 124 aa1.47□□□□□ -2.17
AC055720.1-201ENST00000539552 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 IGIPA6NJ69 53 aa1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 MRPL33O75394 65 aaKnown RBP1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 ARL14EPLP0DKL9 152 aa1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 USMG5Q96IX5 58 aa1.46□□□□□ -2.18
AC055720.1-201ENST00000539552 H0YGG7 62 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 H3BUX3 64 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 M0R1W7 72 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 SPRR2EP22531 72 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 SPRR2BP35325 72 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 SPRR2AP35326 72 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 DEFB136Q30KP8 78 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 PIGYQ3MUY2 71 aa1.45□□□□□ -2.18
AC055720.1-201ENST00000539552 H3BSH0 61 aa1.44□□□□□ -2.18
AC055720.1-201ENST00000539552 I3L3M4 83 aa1.44□□□□□ -2.18
AC055720.1-201ENST00000539552 PLNP26678 52 aa1.44□□□□□ -2.18
AC055720.1-201ENST00000539552 SPINK9Q5DT21 86 aa1.44□□□□□ -2.18
AC055720.1-201ENST00000539552 CNFNQ9BYD5 112 aa1.44□□□□□ -2.18
AC055720.1-201ENST00000539552 K7EQZ3 153 aa1.43□□□□□ -2.18
AC055720.1-201ENST00000539552 LINC01590Q5TEZ4 76 aa1.43□□□□□ -2.18
AC055720.1-201ENST00000539552 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
AC055720.1-201ENST00000539552 C10orf95Q9H7T3 257 aa1.42□□□□□ -2.18
AC055720.1-201ENST00000539552 ABRACLQ9P1F3 81 aa1.42□□□□□ -2.18
AC055720.1-201ENST00000539552 SPRR2DP22532 72 aa1.41□□□□□ -2.18
AC055720.1-201ENST00000539552 CRIP1P50238 77 aa1.41□□□□□ -2.18
AC055720.1-201ENST00000539552 COX6B2Q6YFQ2 88 aa1.41□□□□□ -2.18
AC055720.1-201ENST00000539552 Q6ZSA8 131 aa1.41□□□□□ -2.18
AC055720.1-201ENST00000539552 MRPL34Q9BQ48 92 aaKnown RBP1.41□□□□□ -2.18
AC055720.1-201ENST00000539552 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
AC055720.1-201ENST00000539552 COX6A2Q02221 97 aa1.4□□□□□ -2.19
AC055720.1-201ENST00000539552 PRB3Q04118 309 aaPredicted RBP1.4□□□□□ -2.19
AC055720.1-201ENST00000539552 TTTY10Q9BZA0 68 aa1.4□□□□□ -2.19
AC055720.1-201ENST00000539552 RPS27P42677 84 aaKnown RBP1.39□□□□□ -2.19
AC055720.1-201ENST00000539552 H0YGX0 51 aa1.38□□□□□ -2.19
AC055720.1-201ENST00000539552 LINC01546A6NGU7 62 aa1.37□□□□□ -2.19
AC055720.1-201ENST00000539552 CDKN2A-AS1Q9UH64 79 aa1.37□□□□□ -2.19
AC055720.1-201ENST00000539552 Q8IZM0 81 aa1.36□□□□□ -2.19
AC055720.1-201ENST00000539552 ARHGAP5-AS1Q96IT6 56 aa1.36□□□□□ -2.19
AC055720.1-201ENST00000539552 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
AC055720.1-201ENST00000539552 DEFB135Q30KP9 77 aa1.35□□□□□ -2.19
AC055720.1-201ENST00000539552 A0A0D9SG42 100 aa1.34□□□□□ -2.19
AC055720.1-201ENST00000539552 NDUFA3O95167 84 aa1.34□□□□□ -2.19
AC055720.1-201ENST00000539552 LINC00158P58513 81 aa1.33□□□□□ -2.2
AC055720.1-201ENST00000539552 M0R2T5 61 aa1.31□□□□□ -2.2
AC055720.1-201ENST00000539552 DEFB4AO15263 64 aa1.31□□□□□ -2.2
AC055720.1-201ENST00000539552 SPRR1AP35321 89 aa1.31□□□□□ -2.2
AC055720.1-201ENST00000539552 MT4P47944 62 aa1.3□□□□□ -2.2
AC055720.1-201ENST00000539552 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
AC055720.1-201ENST00000539552 TMEM167BQ9NRX6 74 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms