RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NREPQ16612 68 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 KRTAP20-2Q3LI61 65 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 TNCP24821 2201 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 A0A1B0GWA3 101 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 GNGT1P63211 74 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 BAGE2Q86Y30 109 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 V9GYV3 84 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 DNAJC13O75165 2243 aa0.15□□□□□ -2.39
HIF1A-204ENST00000539097 MGPP08493 103 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 R4GMQ9 66 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 SNRPGP15A8MWD9 76 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 A0A1B0GUT8 65 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 SPRR1AP35321 89 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 SFTA2Q6UW10 78 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 CMC2Q9NRP2 79 aa0.14□□□□□ -2.39
HIF1A-204ENST00000539097 SMIM27A0A1W2PRY6 76 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 PRH1P02810 166 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 MT1HL1P0DM35 61 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 SPINT3P49223 89 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 SPINK6Q6UWN8 80 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 DEFB107AQ8IZN7 70 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 WFDC9Q8NEX5 89 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 LEPROTL1O95214 131 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
HIF1A-204ENST00000539097 COX7BP24311 80 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 A0A087WXM4 84 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 DEFB131BA0A096LNP1 70 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 LINC01549A6NIU2 74 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 D6R8Y8 96 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 MUSTN1Q8IVN3 82 aa0.13□□□□□ -2.39
HIF1A-204ENST00000539097 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 A0A0D9SFI3 127 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 ENHOQ6UWT2 76 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 SMIM5Q71RC9 77 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 ACACAQ13085 2346 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 MT1HP80294 61 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 ATXN8Q156A1 80 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 DEFB112Q30KQ8 113 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 CRIPTQ9P021 101 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 COX6B2Q6YFQ2 88 aa0.12□□□□□ -2.39
HIF1A-204ENST00000539097 HAMPP81172 84 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 I3L3M4 83 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 ACYP2P14621 99 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 RPS27P42677 84 aaKnown RBP0.11□□□□□ -2.39
HIF1A-204ENST00000539097 RPS27LQ71UM5 84 aaKnown RBP0.11□□□□□ -2.39
HIF1A-204ENST00000539097 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 NDUFA4O00483 81 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 SMIM11AP58511 58 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 MRPL34Q9BQ48 92 aaKnown RBP0.11□□□□□ -2.39
HIF1A-204ENST00000539097 TP53AIP1Q9HCN2 124 aa0.11□□□□□ -2.39
HIF1A-204ENST00000539097 A0A1B0GU69 56 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 DEFB104AQ8WTQ1 72 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 NMES1Q9C002 83 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 NDUFB1O75438 58 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 PRM1P04553 51 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 DEFB124Q8NES8 71 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 KRTAP19-5Q3LI72 72 aa0.1□□□□□ -2.39
HIF1A-204ENST00000539097 KNL1Q8NG31 2342 aa0.09□□□□□ -2.39
HIF1A-204ENST00000539097 SSBP3-AS1Q7Z2R9 100 aa0.09□□□□□ -2.39
HIF1A-204ENST00000539097 Q8IZM0 81 aa0.09□□□□□ -2.4
HIF1A-204ENST00000539097 CDKN2A-AS1Q9UH64 79 aa0.09□□□□□ -2.4
HIF1A-204ENST00000539097 NDUFA3O95167 84 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 H1FX-AS1Q4G0G2 97 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 USMG5Q96IX5 58 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 CTXND1A0A1B0GTU2 59 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 CCL22O00626 93 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 MT1AP04731 61 aa0.08□□□□□ -2.4
HIF1A-204ENST00000539097 ETDCA0A1B0GVM5 59 aa0.07□□□□□ -2.4
HIF1A-204ENST00000539097 DEFB130BP0DP73 79 aa0.07□□□□□ -2.4
HIF1A-204ENST00000539097 DEFB130AP0DP74 79 aa0.07□□□□□ -2.4
HIF1A-204ENST00000539097 SPRR1BP22528 89 aa0.07□□□□□ -2.4
HIF1A-204ENST00000539097 M0R1W7 72 aa0.07□□□□□ -2.4
HIF1A-204ENST00000539097 H3BVH4 76 aa0.06□□□□□ -2.4
HIF1A-204ENST00000539097 GAFA1Q96PS6 74 aa0.06□□□□□ -2.4
HIF1A-204ENST00000539097 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
HIF1A-204ENST00000539097 IGLV5-48A0A075B6I7 105 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 TFF3Q07654 80 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 KRTAP6-2Q3LI66 62 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 PLNP26678 52 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 S4R3F8 94 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 U3KQA8 63 aa0.05□□□□□ -2.4
HIF1A-204ENST00000539097 M0R2T5 61 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 LINC00158P58513 81 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 UBE2DNLQ8IWF7 75 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 FXYD6Q9H0Q3 95 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 FCER1GP30273 86 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 WFDC13Q8IUB5 93 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 WT1-ASQ06250 92 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 MMP24-AS1A0A0U1RRL7 71 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 SPINK4O60575 86 aa0.04□□□□□ -2.4
HIF1A-204ENST00000539097 SPTY2D1-AS1A0A0U1RR47 76 aa0.03□□□□□ -2.4
HIF1A-204ENST00000539097 DEFB105AQ8NG35 78 aa0.03□□□□□ -2.4
HIF1A-204ENST00000539097 MT2AP02795 61 aa0.03□□□□□ -2.41
HIF1A-204ENST00000539097 KRTAP8-1Q8IUC2 63 aa0.03□□□□□ -2.41
HIF1A-204ENST00000539097 UBL5Q9BZL1 73 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 MT1FP04733 61 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 SNRPGP62308 76 aaKnown RBP0.02□□□□□ -2.41
HIF1A-204ENST00000539097 SERF2P84101 59 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 PIGYQ3MUY2 71 aa0.02□□□□□ -2.41
HIF1A-204ENST00000539097 CLPSL2Q6UWE3 100 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms