RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 PLECQ15149 4684 aaKnown RBP5.44□□□□□ -1.54
CIT-208ENST00000537607 DNAH11Q96DT5 4516 aa5.43□□□□□ -1.54
CIT-208ENST00000537607 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
CIT-208ENST00000537607 DNAH1Q9P2D7 4330 aa5.36□□□□□ -1.55
CIT-208ENST00000537607 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
CIT-208ENST00000537607 ALMS1Q8TCU4 4167 aa5.35□□□□□ -1.55
CIT-208ENST00000537607 FAT1Q14517 4588 aa5.3□□□□□ -1.56
CIT-208ENST00000537607 DNAH10Q8IVF4 4471 aa5.29□□□□□ -1.56
CIT-208ENST00000537607 RYR1P21817 5038 aa5.27□□□□□ -1.57
CIT-208ENST00000537607 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
CIT-208ENST00000537607 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
CIT-208ENST00000537607 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
CIT-208ENST00000537607 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
CIT-208ENST00000537607 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
CIT-208ENST00000537607 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
CIT-208ENST00000537607 DNAH17Q9UFH2 4485 aa5.2□□□□□ -1.58
CIT-208ENST00000537607 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
CIT-208ENST00000537607 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
CIT-208ENST00000537607 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
CIT-208ENST00000537607 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
CIT-208ENST00000537607 PRKDCP78527 4128 aaKnown RBP5.12□□□□□ -1.59
CIT-208ENST00000537607 SACSQ9NZJ4 4579 aa5.11□□□□□ -1.59
CIT-208ENST00000537607 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
CIT-208ENST00000537607 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
CIT-208ENST00000537607 MT1HP80294 61 aa5.06□□□□□ -1.6
CIT-208ENST00000537607 MYCBP2O75592 4640 aa5.04□□□□□ -1.6
CIT-208ENST00000537607 INE1O15225 51 aa5.02□□□□□ -1.61
CIT-208ENST00000537607 MT2AP02795 61 aa5.01□□□□□ -1.61
CIT-208ENST00000537607 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
CIT-208ENST00000537607 LYSTQ99698 3801 aa4.99□□□□□ -1.61
CIT-208ENST00000537607 DYNC2H1Q8NCM8 4307 aaKnown RBP4.99□□□□□ -1.61
CIT-208ENST00000537607 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
CIT-208ENST00000537607 RYR3Q15413 4870 aa4.98□□□□□ -1.61
CIT-208ENST00000537607 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
CIT-208ENST00000537607 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
CIT-208ENST00000537607 VPS13BQ7Z7G8 4022 aa4.95□□□□□ -1.62
CIT-208ENST00000537607 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
CIT-208ENST00000537607 MT1FP04733 61 aa4.93□□□□□ -1.62
CIT-208ENST00000537607 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
CIT-208ENST00000537607 ANK2Q01484 3957 aa4.92□□□□□ -1.62
CIT-208ENST00000537607 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
CIT-208ENST00000537607 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
CIT-208ENST00000537607 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
CIT-208ENST00000537607 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
CIT-208ENST00000537607 RYR2Q92736 4967 aa4.76□□□□□ -1.65
CIT-208ENST00000537607 HERC2O95714 4834 aa4.75□□□□□ -1.65
CIT-208ENST00000537607 HYDINQ4G0P3 5121 aa4.7□□□□□ -1.66
CIT-208ENST00000537607 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
CIT-208ENST00000537607 LRP2P98164 4655 aa4.7□□□□□ -1.66
CIT-208ENST00000537607 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
CIT-208ENST00000537607 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
CIT-208ENST00000537607 CMYA5Q8N3K9 4069 aa4.69□□□□□ -1.66
CIT-208ENST00000537607 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
CIT-208ENST00000537607 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.67
CIT-208ENST00000537607 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
CIT-208ENST00000537607 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
CIT-208ENST00000537607 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.68
CIT-208ENST00000537607 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
CIT-208ENST00000537607 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
CIT-208ENST00000537607 BIRC6Q9NR09 4857 aa4.56□□□□□ -1.68
CIT-208ENST00000537607 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
CIT-208ENST00000537607 PKHD1P08F94 4074 aa4.53□□□□□ -1.68
CIT-208ENST00000537607 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
CIT-208ENST00000537607 MT1XP80297 61 aa4.51□□□□□ -1.69
CIT-208ENST00000537607 MT1BP07438 61 aa4.51□□□□□ -1.69
CIT-208ENST00000537607 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
CIT-208ENST00000537607 HSPG2P98160 4391 aa4.5□□□□□ -1.69
CIT-208ENST00000537607 PKD1P98161 4303 aa4.49□□□□□ -1.69
CIT-208ENST00000537607 HERC1Q15751 4861 aa4.48□□□□□ -1.69
CIT-208ENST00000537607 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
CIT-208ENST00000537607 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.7
CIT-208ENST00000537607 LPAP08519 4548 aa4.4□□□□□ -1.71
CIT-208ENST00000537607 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
CIT-208ENST00000537607 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
CIT-208ENST00000537607 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
CIT-208ENST00000537607 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
CIT-208ENST00000537607 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
CIT-208ENST00000537607 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
CIT-208ENST00000537607 SPRR2EP22531 72 aa4.31□□□□□ -1.72
CIT-208ENST00000537607 SPRR2BP35325 72 aa4.31□□□□□ -1.72
CIT-208ENST00000537607 SPRR2AP35326 72 aa4.31□□□□□ -1.72
CIT-208ENST00000537607 MT1GP13640 62 aa4.27□□□□□ -1.73
CIT-208ENST00000537607 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
CIT-208ENST00000537607 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
CIT-208ENST00000537607 LCE2BO14633 110 aa4.24□□□□□ -1.73
CIT-208ENST00000537607 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
CIT-208ENST00000537607 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
CIT-208ENST00000537607 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
CIT-208ENST00000537607 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.74
CIT-208ENST00000537607 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
CIT-208ENST00000537607 SPRR2DP22532 72 aa4.15□□□□□ -1.74
CIT-208ENST00000537607 TNXBP22105 4242 aa4.14□□□□□ -1.75
CIT-208ENST00000537607 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
CIT-208ENST00000537607 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
CIT-208ENST00000537607 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
CIT-208ENST00000537607 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
CIT-208ENST00000537607 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CIT-208ENST00000537607 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
CIT-208ENST00000537607 MT1LQ93083 61 aa4.07□□□□□ -1.76
CIT-208ENST00000537607 MT1EP04732 61 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms