RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RBM3P98179 157 aaKnown RBP2.24□□□□□ -2.05
CASP4-213ENST00000534356 Q8N8P6 123 aa2.24□□□□□ -2.05
CASP4-213ENST00000534356 IFI27L1Q96BM0 104 aa2.24□□□□□ -2.05
CASP4-213ENST00000534356 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
CASP4-213ENST00000534356 MYMXA0A1B0GTQ4 84 aa2.23□□□□□ -2.05
CASP4-213ENST00000534356 LEPROTL1O95214 131 aa2.23□□□□□ -2.05
CASP4-213ENST00000534356 SPINK1P00995 79 aa2.23□□□□□ -2.05
CASP4-213ENST00000534356 Q1T7F1 81 aa2.23□□□□□ -2.05
CASP4-213ENST00000534356 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
CASP4-213ENST00000534356 TRAV13-2A0A0B4J235 113 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 SMIM27A0A1W2PRY6 76 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 PPP1R17O96001 155 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 MT2AP02795 61 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 COX6B2Q6YFQ2 88 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 SCGB3A1Q96QR1 104 aa2.22□□□□□ -2.05
CASP4-213ENST00000534356 NHP2Q9NX24 153 aaKnown RBP2.22□□□□□ -2.05
CASP4-213ENST00000534356 A0A0G2JQZ4 141 aa2.21□□□□□ -2.06
CASP4-213ENST00000534356 MT1FP04733 61 aa2.21□□□□□ -2.06
CASP4-213ENST00000534356 ATXN8Q156A1 80 aa2.21□□□□□ -2.06
CASP4-213ENST00000534356 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
CASP4-213ENST00000534356 CYP4F30PQ9H0H9 118 aa2.21□□□□□ -2.06
CASP4-213ENST00000534356 LOC107984156A0A0G2JMH3 177 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 KLKP1Q107X0 134 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 ATP5EP2Q5VTU8 51 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 ARL17AQ8IVW1 177 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 CLEC2BQ92478 149 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 Q9BRP9 147 aa2.2□□□□□ -2.06
CASP4-213ENST00000534356 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 TRBV10-2A0A0K0K1G8 114 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 H7C2G1 150 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 NCR3O14931 201 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 FXYD2P54710 66 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 SOSTDC1Q6X4U4 206 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 PRO1854Q9UHT4 67 aa2.19□□□□□ -2.06
CASP4-213ENST00000534356 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 A6NN06 94 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 H7BZZ5 65 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 COX6CP09669 75 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 SPRR1AP35321 89 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 Q6JHZ5 121 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 SSBP3-AS1Q7Z2R9 100 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 NDUFA12Q9UI09 145 aa2.18□□□□□ -2.06
CASP4-213ENST00000534356 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
CASP4-213ENST00000534356 LINC00158P58513 81 aa2.17□□□□□ -2.06
CASP4-213ENST00000534356 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
CASP4-213ENST00000534356 FAM19A2Q8N3H0 131 aa2.17□□□□□ -2.06
CASP4-213ENST00000534356 LIMD2Q9BT23 127 aa2.17□□□□□ -2.06
CASP4-213ENST00000534356 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
CASP4-213ENST00000534356 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
CASP4-213ENST00000534356 KCNQ1DNQ9H478 68 aa2.16□□□□□ -2.06
CASP4-213ENST00000534356 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
CASP4-213ENST00000534356 hDV103S1A0JD37 113 aa2.15□□□□□ -2.07
CASP4-213ENST00000534356 ZNF815PA8K554 130 aa2.15□□□□□ -2.07
CASP4-213ENST00000534356 C20orf197Q8N268 126 aa2.15□□□□□ -2.07
CASP4-213ENST00000534356 LINC01549A6NIU2 74 aa2.14□□□□□ -2.07
CASP4-213ENST00000534356 KRTAP19-6Q3LI70 58 aa2.14□□□□□ -2.07
CASP4-213ENST00000534356 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
CASP4-213ENST00000534356 TEX49A0A1B0GTD5 131 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 HCG22E2RYF7 251 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 F8WEM9 126 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 CASC2Q6XLA1 102 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
CASP4-213ENST00000534356 PLNP26678 52 aa2.12□□□□□ -2.07
CASP4-213ENST00000534356 COX17Q14061 63 aa2.12□□□□□ -2.07
CASP4-213ENST00000534356 Q6ZRX8 168 aa2.12□□□□□ -2.07
CASP4-213ENST00000534356 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
CASP4-213ENST00000534356 TRAV23DV6A0A075B6W5 121 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 TRAV22A0A0B4J277 110 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 LINC01546A6NGU7 62 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 DNAL4O96015 105 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 DEFB105AQ8NG35 78 aa2.11□□□□□ -2.07
CASP4-213ENST00000534356 MUSTN1Q8IVN3 82 aa2.1□□□□□ -2.07
CASP4-213ENST00000534356 C14orf132Q9NPU4 83 aa2.1□□□□□ -2.07
CASP4-213ENST00000534356 K7EMI3 77 aa2.09□□□□□ -2.07
CASP4-213ENST00000534356 SPRR1BP22528 89 aa2.09□□□□□ -2.07
CASP4-213ENST00000534356 OBSCN-AS1Q96MR7 158 aa2.09□□□□□ -2.07
CASP4-213ENST00000534356 KMT2DO14686 5537 aa2.09□□□□□ -2.08
CASP4-213ENST00000534356 NDUFB1O75438 58 aa2.08□□□□□ -2.08
CASP4-213ENST00000534356 Q6ZQT0 140 aa2.08□□□□□ -2.08
CASP4-213ENST00000534356 TRAV12-1A0A0B4J245 112 aa2.07□□□□□ -2.08
CASP4-213ENST00000534356 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
CASP4-213ENST00000534356 ROMO1P60602 79 aa2.07□□□□□ -2.08
CASP4-213ENST00000534356 SFTA2Q6UW10 78 aa2.07□□□□□ -2.08
CASP4-213ENST00000534356 TMEM254Q8TBM7 123 aa2.07□□□□□ -2.08
CASP4-213ENST00000534356 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
CASP4-213ENST00000534356 BAALC-AS2P0C853 105 aa2.06□□□□□ -2.08
CASP4-213ENST00000534356 Q5VV11 94 aa2.06□□□□□ -2.08
CASP4-213ENST00000534356 UBL5Q9BZL1 73 aa2.06□□□□□ -2.08
CASP4-213ENST00000534356 A0A087WSZ3 146 aa2.05□□□□□ -2.08
CASP4-213ENST00000534356 Q96NJ1 140 aa2.05□□□□□ -2.08
CASP4-213ENST00000534356 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
CASP4-213ENST00000534356 IGKV3D-7A0A0C4DH55 119 aa2.04□□□□□ -2.08
CASP4-213ENST00000534356 TRBV7-4A0A0J9YYF1 115 aa2.04□□□□□ -2.08
CASP4-213ENST00000534356 ORMDL1Q9P0S3 153 aa2.04□□□□□ -2.08
CASP4-213ENST00000534356 JMJD7-PLA2G4BH0Y9G9 81 aa2.03□□□□□ -2.08
CASP4-213ENST00000534356 MIR22HGQ0VDD5 57 aa2.03□□□□□ -2.08
CASP4-213ENST00000534356 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms