RNA–Protein interactions for RNA: ENST00000532406.1

KNL1-210, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-210ENST00000532406 KMT2AQ03164 3969 aa2.7□□□□□ -1.98
KNL1-210ENST00000532406 SACSQ9NZJ4 4579 aa2.69□□□□□ -1.98
KNL1-210ENST00000532406 A6NN06 94 aa2.69□□□□□ -1.98
KNL1-210ENST00000532406 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
KNL1-210ENST00000532406 KRTAP13-2Q52LG2 175 aa2.68□□□□□ -1.98
KNL1-210ENST00000532406 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
KNL1-210ENST00000532406 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
KNL1-210ENST00000532406 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
KNL1-210ENST00000532406 LRP1BQ9NZR2 4599 aa2.66□□□□□ -1.98
KNL1-210ENST00000532406 SPINK7P58062 85 aa2.66□□□□□ -1.98
KNL1-210ENST00000532406 RPS29P62273 56 aaKnown RBP2.66□□□□□ -1.98
KNL1-210ENST00000532406 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
KNL1-210ENST00000532406 SPINK6Q6UWN8 80 aa2.66□□□□□ -1.98
KNL1-210ENST00000532406 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
KNL1-210ENST00000532406 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
KNL1-210ENST00000532406 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
KNL1-210ENST00000532406 SPINK1P00995 79 aa2.64□□□□□ -1.99
KNL1-210ENST00000532406 KRTAP10-1P60331 282 aa2.64□□□□□ -1.99
KNL1-210ENST00000532406 PKD1P98161 4303 aa2.64□□□□□ -1.99
KNL1-210ENST00000532406 LINC01554Q52M75 96 aa2.63□□□□□ -1.99
KNL1-210ENST00000532406 A0A1B0GU33 70 aa2.62□□□□□ -1.99
KNL1-210ENST00000532406 LY6G6CO95867 125 aa2.62□□□□□ -1.99
KNL1-210ENST00000532406 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
KNL1-210ENST00000532406 C7orf65Q6ZTY9 151 aa2.62□□□□□ -1.99
KNL1-210ENST00000532406 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
KNL1-210ENST00000532406 FBN3Q75N90 2809 aa2.61□□□□□ -1.99
KNL1-210ENST00000532406 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
KNL1-210ENST00000532406 MEGF8Q7Z7M0 2845 aa2.61□□□□□ -1.99
KNL1-210ENST00000532406 PKHD1L1Q86WI1 4243 aa2.61□□□□□ -1.99
KNL1-210ENST00000532406 A0A1B0GU69 56 aa2.6□□□□□ -1.99
KNL1-210ENST00000532406 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
KNL1-210ENST00000532406 TGP01266 2768 aa2.6□□□□□ -1.99
KNL1-210ENST00000532406 UQCR11O14957 56 aa2.59□□□□□ -1.99
KNL1-210ENST00000532406 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
KNL1-210ENST00000532406 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
KNL1-210ENST00000532406 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
KNL1-210ENST00000532406 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
KNL1-210ENST00000532406 KRTAP21-3Q3LHN1 58 aa2.57□□□□□ -2
KNL1-210ENST00000532406 DYNC1H1Q14204 4646 aaKnown RBP2.57□□□□□ -2
KNL1-210ENST00000532406 DNHD1Q96M86 4753 aa2.56□□□□□ -2
KNL1-210ENST00000532406 LINC00304Q8N9R0 145 aa2.56□□□□□ -2
KNL1-210ENST00000532406 RETNLBQ9BQ08 111 aa2.56□□□□□ -2
KNL1-210ENST00000532406 R4GN34 69 aa2.56□□□□□ -2
KNL1-210ENST00000532406 APOBP04114 4563 aaKnown RBP2.55□□□□□ -2
KNL1-210ENST00000532406 KRTAP10-4P60372 401 aaPredicted RBP2.55□□□□□ -2
KNL1-210ENST00000532406 HYDINQ4G0P3 5121 aa2.52□□□□□ -2.01
KNL1-210ENST00000532406 PKHD1P08F94 4074 aa2.52□□□□□ -2.01
KNL1-210ENST00000532406 COX6B2Q6YFQ2 88 aa2.49□□□□□ -2.01
KNL1-210ENST00000532406 FAT1Q14517 4588 aa2.48□□□□□ -2.01
KNL1-210ENST00000532406 H0YAA0 97 aa2.48□□□□□ -2.01
KNL1-210ENST00000532406 TNXBP22105 4242 aa2.48□□□□□ -2.01
KNL1-210ENST00000532406 KRTAP10-8P60410 259 aa2.47□□□□□ -2.01
KNL1-210ENST00000532406 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
KNL1-210ENST00000532406 FAT3Q8TDW7 4589 aa2.47□□□□□ -2.01
KNL1-210ENST00000532406 HSPG2P98160 4391 aa2.47□□□□□ -2.01
KNL1-210ENST00000532406 C9orf92A6NGG3 77 aa2.45□□□□□ -2.02
KNL1-210ENST00000532406 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
KNL1-210ENST00000532406 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
KNL1-210ENST00000532406 LRP1Q07954 4544 aaKnown RBP2.44□□□□□ -2.02
KNL1-210ENST00000532406 FLG2Q5D862 2391 aaPredicted RBP2.44□□□□□ -2.02
KNL1-210ENST00000532406 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
KNL1-210ENST00000532406 RPL37P61927 97 aaKnown RBP2.42□□□□□ -2.02
KNL1-210ENST00000532406 RYR2Q92736 4967 aa2.41□□□□□ -2.02
KNL1-210ENST00000532406 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
KNL1-210ENST00000532406 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
KNL1-210ENST00000532406 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
KNL1-210ENST00000532406 ROMO1P60602 79 aa2.36□□□□□ -2.03
KNL1-210ENST00000532406 MT1HL1P0DM35 61 aa2.35□□□□□ -2.03
KNL1-210ENST00000532406 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
KNL1-210ENST00000532406 S4R3F8 94 aa2.35□□□□□ -2.03
KNL1-210ENST00000532406 RYR1P21817 5038 aa2.35□□□□□ -2.03
KNL1-210ENST00000532406 Q5VSD8 79 aa2.34□□□□□ -2.03
KNL1-210ENST00000532406 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
KNL1-210ENST00000532406 M0QZ58 72 aa2.31□□□□□ -2.04
KNL1-210ENST00000532406 P0C880 135 aa2.31□□□□□ -2.04
KNL1-210ENST00000532406 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
KNL1-210ENST00000532406 KMT2CQ8NEZ4 4911 aaKnown RBP2.29□□□□□ -2.04
KNL1-210ENST00000532406 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
KNL1-210ENST00000532406 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
KNL1-210ENST00000532406 A0A0D9SG42 100 aa2.26□□□□□ -2.05
KNL1-210ENST00000532406 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
KNL1-210ENST00000532406 RYR3Q15413 4870 aa2.26□□□□□ -2.05
KNL1-210ENST00000532406 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
KNL1-210ENST00000532406 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
KNL1-210ENST00000532406 CRIPTQ9P021 101 aa2.25□□□□□ -2.05
KNL1-210ENST00000532406 LRP2P98164 4655 aa2.23□□□□□ -2.05
KNL1-210ENST00000532406 MUC17Q685J3 4493 aa2.23□□□□□ -2.05
KNL1-210ENST00000532406 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
KNL1-210ENST00000532406 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
KNL1-210ENST00000532406 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
KNL1-210ENST00000532406 LPAP08519 4548 aa2.2□□□□□ -2.06
KNL1-210ENST00000532406 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
KNL1-210ENST00000532406 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
KNL1-210ENST00000532406 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
KNL1-210ENST00000532406 HERC1Q15751 4861 aa2.15□□□□□ -2.06
KNL1-210ENST00000532406 FLGP20930 4061 aaPredicted RBP2.15□□□□□ -2.07
KNL1-210ENST00000532406 PP632Q6XCG6 107 aa2.13□□□□□ -2.07
KNL1-210ENST00000532406 EPPK1P58107 5090 aaKnown RBP2.12□□□□□ -2.07
KNL1-210ENST00000532406 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
KNL1-210ENST00000532406 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms