RNA–Protein interactions for RNA: ENST00000531658.1

C11orf58-210, Transcript of chromosome 11 open reading frame 58, humanhuman

TSL 1 (best)

Gene C11orf58, Length 4,258 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-210ENST00000531658 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
C11orf58-210ENST00000531658 SMG1Q96Q15 3661 aaKnown RBP2.43□□□□□ -2.02
C11orf58-210ENST00000531658 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
C11orf58-210ENST00000531658 CMYA5Q8N3K9 4069 aa2.42□□□□□ -2.02
C11orf58-210ENST00000531658 CRYBG3Q68DQ2 2970 aa2.41□□□□□ -2.02
C11orf58-210ENST00000531658 TACC2O95359 2948 aa2.41□□□□□ -2.02
C11orf58-210ENST00000531658 FBN1P35555 2871 aaKnown RBP2.4□□□□□ -2.02
C11orf58-210ENST00000531658 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
C11orf58-210ENST00000531658 NBEAL2Q6ZNJ1 2754 aa2.4□□□□□ -2.03
C11orf58-210ENST00000531658 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
C11orf58-210ENST00000531658 DCHS2Q6V1P9 2916 aa2.39□□□□□ -2.03
C11orf58-210ENST00000531658 ADGRG4Q8IZF6 3080 aa2.39□□□□□ -2.03
C11orf58-210ENST00000531658 RELNP78509 3460 aa2.38□□□□□ -2.03
C11orf58-210ENST00000531658 PKD1L1Q8TDX9 2849 aa2.38□□□□□ -2.03
C11orf58-210ENST00000531658 DNHD1Q96M86 4753 aa2.37□□□□□ -2.03
C11orf58-210ENST00000531658 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
C11orf58-210ENST00000531658 KRTAP10-4P60372 401 aaPredicted RBP2.35□□□□□ -2.03
C11orf58-210ENST00000531658 RYR3Q15413 4870 aa2.35□□□□□ -2.03
C11orf58-210ENST00000531658 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
C11orf58-210ENST00000531658 PRKDCP78527 4128 aaKnown RBP2.34□□□□□ -2.03
C11orf58-210ENST00000531658 ZANQ9Y493 2812 aa2.34□□□□□ -2.04
C11orf58-210ENST00000531658 KRTAP10-6P60371 365 aaPredicted RBP2.33□□□□□ -2.04
C11orf58-210ENST00000531658 DNAH7Q8WXX0 4024 aa2.32□□□□□ -2.04
C11orf58-210ENST00000531658 KRTAP4-5Q9BYR2 181 aa2.32□□□□□ -2.04
C11orf58-210ENST00000531658 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
C11orf58-210ENST00000531658 ALMS1Q8TCU4 4167 aa2.3□□□□□ -2.04
C11orf58-210ENST00000531658 LYSTQ99698 3801 aa2.3□□□□□ -2.04
C11orf58-210ENST00000531658 HERC2O95714 4834 aa2.3□□□□□ -2.04
C11orf58-210ENST00000531658 CSMD1Q96PZ7 3565 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 CSMD3Q7Z407 3707 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 CELSR1Q9NYQ6 3014 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 DNAH1Q9P2D7 4330 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 FAT3Q8TDW7 4589 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 TGP01266 2768 aa2.29□□□□□ -2.04
C11orf58-210ENST00000531658 CSMD2Q7Z408 3487 aa2.28□□□□□ -2.04
C11orf58-210ENST00000531658 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
C11orf58-210ENST00000531658 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
C11orf58-210ENST00000531658 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
C11orf58-210ENST00000531658 VWFP04275 2813 aa2.27□□□□□ -2.05
C11orf58-210ENST00000531658 MT3P25713 68 aa2.27□□□□□ -2.05
C11orf58-210ENST00000531658 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
C11orf58-210ENST00000531658 HUWE1Q7Z6Z7 4374 aaKnown RBP2.26□□□□□ -2.05
C11orf58-210ENST00000531658 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
C11orf58-210ENST00000531658 CUBNO60494 3623 aa2.24□□□□□ -2.05
C11orf58-210ENST00000531658 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
C11orf58-210ENST00000531658 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
C11orf58-210ENST00000531658 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
C11orf58-210ENST00000531658 VPS13CQ709C8 3753 aa2.22□□□□□ -2.05
C11orf58-210ENST00000531658 TRRAPQ9Y4A5 3859 aa2.21□□□□□ -2.06
C11orf58-210ENST00000531658 SVEP1Q4LDE5 3571 aa2.21□□□□□ -2.06
C11orf58-210ENST00000531658 RYR2Q92736 4967 aa2.21□□□□□ -2.06
C11orf58-210ENST00000531658 LRP1BQ9NZR2 4599 aa2.2□□□□□ -2.06
C11orf58-210ENST00000531658 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
C11orf58-210ENST00000531658 DNAH11Q96DT5 4516 aa2.17□□□□□ -2.06
C11orf58-210ENST00000531658 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
C11orf58-210ENST00000531658 DNAH10Q8IVF4 4471 aa2.15□□□□□ -2.07
C11orf58-210ENST00000531658 MYCBP2O75592 4640 aa2.15□□□□□ -2.07
C11orf58-210ENST00000531658 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
C11orf58-210ENST00000531658 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
C11orf58-210ENST00000531658 VPS13DQ5THJ4 4388 aa2.13□□□□□ -2.07
C11orf58-210ENST00000531658 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
C11orf58-210ENST00000531658 PLECQ15149 4684 aaKnown RBP2.13□□□□□ -2.07
C11orf58-210ENST00000531658 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
C11orf58-210ENST00000531658 MT1HP80294 61 aa2.12□□□□□ -2.07
C11orf58-210ENST00000531658 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
C11orf58-210ENST00000531658 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
C11orf58-210ENST00000531658 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.08
C11orf58-210ENST00000531658 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.08
C11orf58-210ENST00000531658 SACSQ9NZJ4 4579 aa2.08□□□□□ -2.08
C11orf58-210ENST00000531658 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
C11orf58-210ENST00000531658 VPS13BQ7Z7G8 4022 aa2.08□□□□□ -2.08
C11orf58-210ENST00000531658 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
C11orf58-210ENST00000531658 HERC1Q15751 4861 aa2.08□□□□□ -2.08
C11orf58-210ENST00000531658 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
C11orf58-210ENST00000531658 COL7A1Q02388 2944 aa2.07□□□□□ -2.08
C11orf58-210ENST00000531658 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
C11orf58-210ENST00000531658 KRTAP10-12P60413 245 aa2.05□□□□□ -2.08
C11orf58-210ENST00000531658 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
C11orf58-210ENST00000531658 MT2AP02795 61 aa2.04□□□□□ -2.08
C11orf58-210ENST00000531658 HYDINQ4G0P3 5121 aa2.03□□□□□ -2.08
C11orf58-210ENST00000531658 RYR1P21817 5038 aa2.03□□□□□ -2.08
C11orf58-210ENST00000531658 KMT2CQ8NEZ4 4911 aaKnown RBP2.03□□□□□ -2.08
C11orf58-210ENST00000531658 DNAH8Q96JB1 4490 aa2.02□□□□□ -2.09
C11orf58-210ENST00000531658 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
C11orf58-210ENST00000531658 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
C11orf58-210ENST00000531658 TNXBP22105 4242 aa1.99□□□□□ -2.09
C11orf58-210ENST00000531658 KRTAP10-7P60409 375 aaPredicted RBP1.98□□□□□ -2.09
C11orf58-210ENST00000531658 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
C11orf58-210ENST00000531658 HSPG2P98160 4391 aa1.97□□□□□ -2.09
C11orf58-210ENST00000531658 PKD1P98161 4303 aa1.97□□□□□ -2.09
C11orf58-210ENST00000531658 SPRR2FQ96RM1 72 aa1.97□□□□□ -2.09
C11orf58-210ENST00000531658 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
C11orf58-210ENST00000531658 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
C11orf58-210ENST00000531658 APOBP04114 4563 aaKnown RBP1.95□□□□□ -2.1
C11orf58-210ENST00000531658 SPRR2EP22531 72 aa1.95□□□□□ -2.1
C11orf58-210ENST00000531658 SPRR2BP35325 72 aa1.95□□□□□ -2.1
C11orf58-210ENST00000531658 SPRR2AP35326 72 aa1.95□□□□□ -2.1
C11orf58-210ENST00000531658 KRTAP9-8Q9BYQ0 159 aa1.95□□□□□ -2.1
C11orf58-210ENST00000531658 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
C11orf58-210ENST00000531658 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms