RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 KRTAP12-2P59991 146 aa2.46□□□□□ -2.02
ECHDC1-221ENST00000531582 RYR3Q15413 4870 aa2.45□□□□□ -2.02
ECHDC1-221ENST00000531582 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-221ENST00000531582 TGP01266 2768 aa2.44□□□□□ -2.02
ECHDC1-221ENST00000531582 PKD1L1Q8TDX9 2849 aa2.44□□□□□ -2.02
ECHDC1-221ENST00000531582 TENM1Q9UKZ4 2725 aa2.44□□□□□ -2.02
ECHDC1-221ENST00000531582 A0A096LPF7 62 aa2.43□□□□□ -2.02
ECHDC1-221ENST00000531582 SPINK1P00995 79 aa2.43□□□□□ -2.02
ECHDC1-221ENST00000531582 DNAH3Q8TD57 4116 aa2.43□□□□□ -2.02
ECHDC1-221ENST00000531582 CSMD3Q7Z407 3707 aa2.43□□□□□ -2.02
ECHDC1-221ENST00000531582 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
ECHDC1-221ENST00000531582 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
ECHDC1-221ENST00000531582 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
ECHDC1-221ENST00000531582 S4R3F8 94 aa2.4□□□□□ -2.03
ECHDC1-221ENST00000531582 MEGF8Q7Z7M0 2845 aa2.4□□□□□ -2.03
ECHDC1-221ENST00000531582 MGAM2Q2M2H8 2515 aa2.39□□□□□ -2.03
ECHDC1-221ENST00000531582 KRTAP13-1Q8IUC0 172 aa2.39□□□□□ -2.03
ECHDC1-221ENST00000531582 SPART-AS1P0CW21 52 aa2.38□□□□□ -2.03
ECHDC1-221ENST00000531582 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
ECHDC1-221ENST00000531582 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
ECHDC1-221ENST00000531582 EPPK1P58107 5090 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-221ENST00000531582 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
ECHDC1-221ENST00000531582 LYSTQ99698 3801 aa2.37□□□□□ -2.03
ECHDC1-221ENST00000531582 VWFP04275 2813 aa2.37□□□□□ -2.03
ECHDC1-221ENST00000531582 SACSQ9NZJ4 4579 aa2.36□□□□□ -2.03
ECHDC1-221ENST00000531582 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
ECHDC1-221ENST00000531582 NOTCH1P46531 2555 aa2.35□□□□□ -2.03
ECHDC1-221ENST00000531582 RYR2Q92736 4967 aa2.35□□□□□ -2.03
ECHDC1-221ENST00000531582 APLNQ9ULZ1 77 aa2.35□□□□□ -2.03
ECHDC1-221ENST00000531582 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
ECHDC1-221ENST00000531582 A0A096LNI7 61 aa2.34□□□□□ -2.03
ECHDC1-221ENST00000531582 FRAS1Q86XX4 4008 aa2.33□□□□□ -2.04
ECHDC1-221ENST00000531582 KRTAP10-8P60410 259 aa2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 SPINK6Q6UWN8 80 aa2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 DYNC2H1Q8NCM8 4307 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 HUWE1Q7Z6Z7 4374 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-221ENST00000531582 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
ECHDC1-221ENST00000531582 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
ECHDC1-221ENST00000531582 DNAH1Q9P2D7 4330 aa2.3□□□□□ -2.04
ECHDC1-221ENST00000531582 RYR1P21817 5038 aa2.3□□□□□ -2.04
ECHDC1-221ENST00000531582 KMT2AQ03164 3969 aa2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 A0A0D9SG42 100 aa2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 M0QZ58 72 aa2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 PLECQ15149 4684 aaKnown RBP2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
ECHDC1-221ENST00000531582 Q5VSD8 79 aa2.27□□□□□ -2.05
ECHDC1-221ENST00000531582 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
ECHDC1-221ENST00000531582 VPS13DQ5THJ4 4388 aa2.26□□□□□ -2.05
ECHDC1-221ENST00000531582 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
ECHDC1-221ENST00000531582 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
ECHDC1-221ENST00000531582 HTN3P15516 51 aa2.25□□□□□ -2.05
ECHDC1-221ENST00000531582 TENM3Q9P273 2699 aa2.23□□□□□ -2.05
ECHDC1-221ENST00000531582 DEFB135Q30KP9 77 aa2.22□□□□□ -2.05
ECHDC1-221ENST00000531582 DNAH10Q8IVF4 4471 aa2.21□□□□□ -2.06
ECHDC1-221ENST00000531582 STAB2Q8WWQ8 2551 aa2.21□□□□□ -2.06
ECHDC1-221ENST00000531582 HERC2O95714 4834 aa2.2□□□□□ -2.06
ECHDC1-221ENST00000531582 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
ECHDC1-221ENST00000531582 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
ECHDC1-221ENST00000531582 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
ECHDC1-221ENST00000531582 DNAH6Q9C0G6 4158 aa2.18□□□□□ -2.06
ECHDC1-221ENST00000531582 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
ECHDC1-221ENST00000531582 KIAA1109Q2LD37 5005 aa2.17□□□□□ -2.06
ECHDC1-221ENST00000531582 FAT2Q9NYQ8 4349 aa2.17□□□□□ -2.06
ECHDC1-221ENST00000531582 DEFB4AO15263 64 aa2.17□□□□□ -2.06
ECHDC1-221ENST00000531582 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
ECHDC1-221ENST00000531582 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
ECHDC1-221ENST00000531582 KRTAP13-2Q52LG2 175 aa2.15□□□□□ -2.07
ECHDC1-221ENST00000531582 DYNC1H1Q14204 4646 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-221ENST00000531582 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
ECHDC1-221ENST00000531582 HERC1Q15751 4861 aa2.12□□□□□ -2.07
ECHDC1-221ENST00000531582 PKD1P98161 4303 aa2.12□□□□□ -2.07
ECHDC1-221ENST00000531582 DNAH11Q96DT5 4516 aa2.12□□□□□ -2.07
ECHDC1-221ENST00000531582 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
ECHDC1-221ENST00000531582 HSPG2P98160 4391 aa2.12□□□□□ -2.07
ECHDC1-221ENST00000531582 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
ECHDC1-221ENST00000531582 LRP1BQ9NZR2 4599 aa2.1□□□□□ -2.07
ECHDC1-221ENST00000531582 APOBP04114 4563 aaKnown RBP2.08□□□□□ -2.08
ECHDC1-221ENST00000531582 DMBT1Q9UGM3 2413 aaPredicted RBP2.08□□□□□ -2.08
ECHDC1-221ENST00000531582 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
ECHDC1-221ENST00000531582 UBR4Q5T4S7 5183 aa2.05□□□□□ -2.08
ECHDC1-221ENST00000531582 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
ECHDC1-221ENST00000531582 FAT1Q14517 4588 aa2.05□□□□□ -2.08
ECHDC1-221ENST00000531582 MYCBP2O75592 4640 aa2.03□□□□□ -2.08
ECHDC1-221ENST00000531582 TNP1P09430 55 aa2.03□□□□□ -2.08
ECHDC1-221ENST00000531582 VPS13BQ7Z7G8 4022 aa2.03□□□□□ -2.08
ECHDC1-221ENST00000531582 DNAH8Q96JB1 4490 aa2.01□□□□□ -2.09
ECHDC1-221ENST00000531582 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
ECHDC1-221ENST00000531582 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
ECHDC1-221ENST00000531582 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
ECHDC1-221ENST00000531582 C9orf92A6NGG3 77 aa1.98□□□□□ -2.09
ECHDC1-221ENST00000531582 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
ECHDC1-221ENST00000531582 FAT3Q8TDW7 4589 aa1.97□□□□□ -2.09
ECHDC1-221ENST00000531582 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
ECHDC1-221ENST00000531582 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
ECHDC1-221ENST00000531582 KRTAP10-1P60331 282 aa1.93□□□□□ -2.1
ECHDC1-221ENST00000531582 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
ECHDC1-221ENST00000531582 TNXBP22105 4242 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms