RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 OTOGQ6ZRI0 2925 aa1.3□□□□□ -2.2
ECHDC1-218ENST00000525745 NF1P21359 2839 aa1.3□□□□□ -2.2
ECHDC1-218ENST00000525745 ACANP16112 2415 aa1.29□□□□□ -2.2
ECHDC1-218ENST00000525745 VWFP04275 2813 aa1.29□□□□□ -2.2
ECHDC1-218ENST00000525745 H0YAA0 97 aa1.29□□□□□ -2.2
ECHDC1-218ENST00000525745 MAST4O15021 2626 aa1.29□□□□□ -2.2
ECHDC1-218ENST00000525745 HELZ2Q9BYK8 2649 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-218ENST00000525745 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.2
ECHDC1-218ENST00000525745 STAB2Q8WWQ8 2551 aa1.27□□□□□ -2.21
ECHDC1-218ENST00000525745 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
ECHDC1-218ENST00000525745 BAHCC1Q9P281 2608 aa1.27□□□□□ -2.21
ECHDC1-218ENST00000525745 VPS13CQ709C8 3753 aa1.27□□□□□ -2.21
ECHDC1-218ENST00000525745 S4R3F8 94 aa1.26□□□□□ -2.21
ECHDC1-218ENST00000525745 TENM4Q6N022 2769 aa1.26□□□□□ -2.21
ECHDC1-218ENST00000525745 ITPR2Q14571 2701 aa1.26□□□□□ -2.21
ECHDC1-218ENST00000525745 HECTD1Q9ULT8 2610 aa1.26□□□□□ -2.21
ECHDC1-218ENST00000525745 F8P00451 2351 aa1.26□□□□□ -2.21
ECHDC1-218ENST00000525745 NBEAL1Q6ZS30 2694 aa1.25□□□□□ -2.21
ECHDC1-218ENST00000525745 ANK3Q12955 4377 aaKnown RBP1.25□□□□□ -2.21
ECHDC1-218ENST00000525745 TENM1Q9UKZ4 2725 aa1.25□□□□□ -2.21
ECHDC1-218ENST00000525745 MGAM2Q2M2H8 2515 aa1.24□□□□□ -2.21
ECHDC1-218ENST00000525745 NBPF19A0A087WUL8 3843 aa1.24□□□□□ -2.21
ECHDC1-218ENST00000525745 CUBNO60494 3623 aa1.23□□□□□ -2.21
ECHDC1-218ENST00000525745 TENM3Q9P273 2699 aa1.23□□□□□ -2.21
ECHDC1-218ENST00000525745 ZFHX3Q15911 3703 aa1.23□□□□□ -2.21
ECHDC1-218ENST00000525745 NOTCH1P46531 2555 aa1.22□□□□□ -2.21
ECHDC1-218ENST00000525745 P0C880 135 aa1.22□□□□□ -2.21
ECHDC1-218ENST00000525745 TPRXLQ17RH7 258 aa1.22□□□□□ -2.21
ECHDC1-218ENST00000525745 AKAP9Q99996 3911 aa1.22□□□□□ -2.21
ECHDC1-218ENST00000525745 STAB1Q9NY15 2570 aa1.21□□□□□ -2.22
ECHDC1-218ENST00000525745 C9orf92A6NGG3 77 aa1.21□□□□□ -2.22
ECHDC1-218ENST00000525745 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
ECHDC1-218ENST00000525745 DNAH1Q9P2D7 4330 aa1.21□□□□□ -2.22
ECHDC1-218ENST00000525745 ZNF469Q96JG9 3925 aaPredicted RBP1.21□□□□□ -2.22
ECHDC1-218ENST00000525745 COL6A5A8TX70 2615 aa1.2□□□□□ -2.22
ECHDC1-218ENST00000525745 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
ECHDC1-218ENST00000525745 TENM2Q9NT68 2774 aa1.19□□□□□ -2.22
ECHDC1-218ENST00000525745 MEGF8Q7Z7M0 2845 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 A0A0D9SG42 100 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 PKD1L1Q8TDX9 2849 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 TGP01266 2768 aa1.18□□□□□ -2.22
ECHDC1-218ENST00000525745 KRTAP12-1P59990 96 aa1.17□□□□□ -2.22
ECHDC1-218ENST00000525745 FBN1P35555 2871 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-218ENST00000525745 HUWE1Q7Z6Z7 4374 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-218ENST00000525745 TNP1P09430 55 aa1.16□□□□□ -2.22
ECHDC1-218ENST00000525745 KRTAP13-4Q3LI77 160 aa1.16□□□□□ -2.22
ECHDC1-218ENST00000525745 Q5VSD8 79 aa1.16□□□□□ -2.22
ECHDC1-218ENST00000525745 PRO2289Q9P1D8 64 aa1.16□□□□□ -2.22
ECHDC1-218ENST00000525745 SRRM2Q9UQ35 2752 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-218ENST00000525745 VPS13DQ5THJ4 4388 aa1.15□□□□□ -2.22
ECHDC1-218ENST00000525745 TRRAPQ9Y4A5 3859 aa1.15□□□□□ -2.23
ECHDC1-218ENST00000525745 ANK2Q01484 3957 aa1.15□□□□□ -2.23
ECHDC1-218ENST00000525745 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-218ENST00000525745 DNAH3Q8TD57 4116 aa1.13□□□□□ -2.23
ECHDC1-218ENST00000525745 DYNC2H1Q8NCM8 4307 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-218ENST00000525745 COL7A1Q02388 2944 aa1.12□□□□□ -2.23
ECHDC1-218ENST00000525745 SMR3BP02814 79 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-218ENST00000525745 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
ECHDC1-218ENST00000525745 PRKDCP78527 4128 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-218ENST00000525745 DNAH10Q8IVF4 4471 aa1.11□□□□□ -2.23
ECHDC1-218ENST00000525745 FBN3Q75N90 2809 aa1.11□□□□□ -2.23
ECHDC1-218ENST00000525745 INE1O15225 51 aa1.11□□□□□ -2.23
ECHDC1-218ENST00000525745 DNAH9Q9NYC9 4486 aa1.11□□□□□ -2.23
ECHDC1-218ENST00000525745 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
ECHDC1-218ENST00000525745 DMBT1Q9UGM3 2413 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-218ENST00000525745 ALMS1Q8TCU4 4167 aa1.09□□□□□ -2.23
ECHDC1-218ENST00000525745 KRTAP6-3Q3LI67 103 aa1.09□□□□□ -2.23
ECHDC1-218ENST00000525745 C10orf95Q9H7T3 257 aa1.09□□□□□ -2.23
ECHDC1-218ENST00000525745 FLG2Q5D862 2391 aaPredicted RBP1.09□□□□□ -2.23
ECHDC1-218ENST00000525745 DNAH17Q9UFH2 4485 aa1.09□□□□□ -2.24
ECHDC1-218ENST00000525745 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
ECHDC1-218ENST00000525745 DNAH6Q9C0G6 4158 aa1.08□□□□□ -2.24
ECHDC1-218ENST00000525745 FRAS1Q86XX4 4008 aa1.07□□□□□ -2.24
ECHDC1-218ENST00000525745 MT1HL1P0DM35 61 aa1.07□□□□□ -2.24
ECHDC1-218ENST00000525745 DNAH2Q9P225 4427 aa1.07□□□□□ -2.24
ECHDC1-218ENST00000525745 DNAH7Q8WXX0 4024 aa1.06□□□□□ -2.24
ECHDC1-218ENST00000525745 LYSTQ99698 3801 aa1.06□□□□□ -2.24
ECHDC1-218ENST00000525745 STARD9Q9P2P6 4700 aa1.06□□□□□ -2.24
ECHDC1-218ENST00000525745 LRP1BQ9NZR2 4599 aa1.05□□□□□ -2.24
ECHDC1-218ENST00000525745 PKHD1L1Q86WI1 4243 aa1.05□□□□□ -2.24
ECHDC1-218ENST00000525745 DNAH11Q96DT5 4516 aa1.05□□□□□ -2.24
ECHDC1-218ENST00000525745 SACSQ9NZJ4 4579 aa1.05□□□□□ -2.24
ECHDC1-218ENST00000525745 PLECQ15149 4684 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-218ENST00000525745 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
ECHDC1-218ENST00000525745 HECTD4Q9Y4D8 3996 aa1.04□□□□□ -2.24
ECHDC1-218ENST00000525745 CMYA5Q8N3K9 4069 aa1.04□□□□□ -2.24
ECHDC1-218ENST00000525745 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
ECHDC1-218ENST00000525745 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
ECHDC1-218ENST00000525745 PKHD1P08F94 4074 aa1.02□□□□□ -2.25
ECHDC1-218ENST00000525745 KMT2AQ03164 3969 aa1.01□□□□□ -2.25
ECHDC1-218ENST00000525745 DNAH5Q8TE73 4624 aa1□□□□□ -2.25
ECHDC1-218ENST00000525745 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
ECHDC1-218ENST00000525745 PKD1P98161 4303 aa1□□□□□ -2.25
ECHDC1-218ENST00000525745 M0R2T5 61 aa0.99□□□□□ -2.25
ECHDC1-218ENST00000525745 APOBP04114 4563 aaKnown RBP0.98□□□□□ -2.25
ECHDC1-218ENST00000525745 TNXBP22105 4242 aa0.98□□□□□ -2.25
ECHDC1-218ENST00000525745 FCGBPQ9Y6R7 5405 aaPredicted RBP0.98□□□□□ -2.25
ECHDC1-218ENST00000525745 LRP1Q07954 4544 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms