RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
CTNND1-210ENST00000524630 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
CTNND1-210ENST00000524630 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
CTNND1-210ENST00000524630 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
CTNND1-210ENST00000524630 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
CTNND1-210ENST00000524630 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
CTNND1-210ENST00000524630 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
CTNND1-210ENST00000524630 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
CTNND1-210ENST00000524630 COL7A1Q02388 2944 aa4.23□□□□□ -1.73
CTNND1-210ENST00000524630 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
CTNND1-210ENST00000524630 DNAH11Q96DT5 4516 aa4.21□□□□□ -1.74
CTNND1-210ENST00000524630 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
CTNND1-210ENST00000524630 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
CTNND1-210ENST00000524630 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
CTNND1-210ENST00000524630 ANK2Q01484 3957 aa4.16□□□□□ -1.74
CTNND1-210ENST00000524630 FRAS1Q86XX4 4008 aa4.15□□□□□ -1.74
CTNND1-210ENST00000524630 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
CTNND1-210ENST00000524630 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
CTNND1-210ENST00000524630 DYNC2H1Q8NCM8 4307 aaKnown RBP4.1□□□□□ -1.75
CTNND1-210ENST00000524630 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
CTNND1-210ENST00000524630 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.76
CTNND1-210ENST00000524630 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
CTNND1-210ENST00000524630 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
CTNND1-210ENST00000524630 DNAH6Q9C0G6 4158 aa4.05□□□□□ -1.76
CTNND1-210ENST00000524630 KMT2AQ03164 3969 aa4.04□□□□□ -1.76
CTNND1-210ENST00000524630 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
CTNND1-210ENST00000524630 VPS13BQ7Z7G8 4022 aa4.03□□□□□ -1.76
CTNND1-210ENST00000524630 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
CTNND1-210ENST00000524630 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
CTNND1-210ENST00000524630 MT1HP80294 61 aa3.99□□□□□ -1.77
CTNND1-210ENST00000524630 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
CTNND1-210ENST00000524630 LRP1BQ9NZR2 4599 aa3.97□□□□□ -1.77
CTNND1-210ENST00000524630 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
CTNND1-210ENST00000524630 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
CTNND1-210ENST00000524630 MT2AP02795 61 aa3.92□□□□□ -1.78
CTNND1-210ENST00000524630 LYSTQ99698 3801 aa3.91□□□□□ -1.78
CTNND1-210ENST00000524630 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
CTNND1-210ENST00000524630 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
CTNND1-210ENST00000524630 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
CTNND1-210ENST00000524630 MT1FP04733 61 aa3.86□□□□□ -1.79
CTNND1-210ENST00000524630 FAT1Q14517 4588 aa3.81□□□□□ -1.8
CTNND1-210ENST00000524630 APOBP04114 4563 aaKnown RBP3.76□□□□□ -1.81
CTNND1-210ENST00000524630 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
CTNND1-210ENST00000524630 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
CTNND1-210ENST00000524630 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
CTNND1-210ENST00000524630 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
CTNND1-210ENST00000524630 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
CTNND1-210ENST00000524630 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CTNND1-210ENST00000524630 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
CTNND1-210ENST00000524630 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
CTNND1-210ENST00000524630 MT1XP80297 61 aa3.62□□□□□ -1.83
CTNND1-210ENST00000524630 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
CTNND1-210ENST00000524630 PKD1P98161 4303 aa3.59□□□□□ -1.83
CTNND1-210ENST00000524630 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
CTNND1-210ENST00000524630 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
CTNND1-210ENST00000524630 HSPG2P98160 4391 aa3.55□□□□□ -1.84
CTNND1-210ENST00000524630 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
CTNND1-210ENST00000524630 TNXBP22105 4242 aa3.55□□□□□ -1.84
CTNND1-210ENST00000524630 RYR1P21817 5038 aa3.55□□□□□ -1.84
CTNND1-210ENST00000524630 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
CTNND1-210ENST00000524630 MT1BP07438 61 aa3.53□□□□□ -1.84
CTNND1-210ENST00000524630 MT1GP13640 62 aa3.52□□□□□ -1.85
CTNND1-210ENST00000524630 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
CTNND1-210ENST00000524630 MYCBP2O75592 4640 aa3.49□□□□□ -1.85
CTNND1-210ENST00000524630 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
CTNND1-210ENST00000524630 LPAP08519 4548 aa3.48□□□□□ -1.85
CTNND1-210ENST00000524630 RYR3Q15413 4870 aa3.46□□□□□ -1.85
CTNND1-210ENST00000524630 SPRR2EP22531 72 aa3.46□□□□□ -1.86
CTNND1-210ENST00000524630 SPRR2BP35325 72 aa3.46□□□□□ -1.86
CTNND1-210ENST00000524630 SPRR2AP35326 72 aa3.46□□□□□ -1.86
CTNND1-210ENST00000524630 KRTAP4-8A0A0G2JLE6 195 aa3.46□□□□□ -1.86
CTNND1-210ENST00000524630 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
CTNND1-210ENST00000524630 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
CTNND1-210ENST00000524630 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.86
CTNND1-210ENST00000524630 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
CTNND1-210ENST00000524630 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
CTNND1-210ENST00000524630 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
CTNND1-210ENST00000524630 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
CTNND1-210ENST00000524630 RYR2Q92736 4967 aa3.35□□□□□ -1.87
CTNND1-210ENST00000524630 SPRR2DP22532 72 aa3.34□□□□□ -1.87
CTNND1-210ENST00000524630 LCE2BO14633 110 aa3.34□□□□□ -1.87
CTNND1-210ENST00000524630 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
CTNND1-210ENST00000524630 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CTNND1-210ENST00000524630 HERC1Q15751 4861 aa3.31□□□□□ -1.88
CTNND1-210ENST00000524630 LRP2P98164 4655 aa3.31□□□□□ -1.88
CTNND1-210ENST00000524630 MT1LQ93083 61 aa3.27□□□□□ -1.89
CTNND1-210ENST00000524630 KRTAP19-2Q3LHN2 52 aa3.25□□□□□ -1.89
CTNND1-210ENST00000524630 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
CTNND1-210ENST00000524630 MT1EP04732 61 aa3.23□□□□□ -1.89
CTNND1-210ENST00000524630 PRM1P04553 51 aa3.2□□□□□ -1.9
CTNND1-210ENST00000524630 KMT2CQ8NEZ4 4911 aaKnown RBP3.16□□□□□ -1.9
CTNND1-210ENST00000524630 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
CTNND1-210ENST00000524630 HERC2O95714 4834 aa3.14□□□□□ -1.91
CTNND1-210ENST00000524630 MT1MQ8N339 61 aa3.12□□□□□ -1.91
CTNND1-210ENST00000524630 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
CTNND1-210ENST00000524630 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
CTNND1-210ENST00000524630 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
CTNND1-210ENST00000524630 MT3P25713 68 aa3.02□□□□□ -1.93
CTNND1-210ENST00000524630 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
CTNND1-210ENST00000524630 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms