RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
CTSC-203ENST00000524463 BSNQ9UPA5 3926 aa4.46□□□□□ -1.7
CTSC-203ENST00000524463 INE1O15225 51 aa4.36□□□□□ -1.71
CTSC-203ENST00000524463 AKAP9Q99996 3911 aa4.32□□□□□ -1.72
CTSC-203ENST00000524463 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
CTSC-203ENST00000524463 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
CTSC-203ENST00000524463 MT1HP80294 61 aa4.28□□□□□ -1.72
CTSC-203ENST00000524463 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
CTSC-203ENST00000524463 DNAH1Q9P2D7 4330 aa4.23□□□□□ -1.73
CTSC-203ENST00000524463 DNAH5Q8TE73 4624 aa4.21□□□□□ -1.74
CTSC-203ENST00000524463 ZNF469Q96JG9 3925 aaPredicted RBP4.16□□□□□ -1.74
CTSC-203ENST00000524463 MT2AP02795 61 aa4.16□□□□□ -1.74
CTSC-203ENST00000524463 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.74
CTSC-203ENST00000524463 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
CTSC-203ENST00000524463 DNAH10Q8IVF4 4471 aa4.12□□□□□ -1.75
CTSC-203ENST00000524463 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
CTSC-203ENST00000524463 MT1FP04733 61 aa4.1□□□□□ -1.75
CTSC-203ENST00000524463 PLECQ15149 4684 aaKnown RBP4.09□□□□□ -1.75
CTSC-203ENST00000524463 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
CTSC-203ENST00000524463 SPRR2EP22531 72 aa4.07□□□□□ -1.76
CTSC-203ENST00000524463 SPRR2BP35325 72 aa4.07□□□□□ -1.76
CTSC-203ENST00000524463 SPRR2AP35326 72 aa4.07□□□□□ -1.76
CTSC-203ENST00000524463 DNAH11Q96DT5 4516 aa4.05□□□□□ -1.76
CTSC-203ENST00000524463 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
CTSC-203ENST00000524463 ANK2Q01484 3957 aa4□□□□□ -1.77
CTSC-203ENST00000524463 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
CTSC-203ENST00000524463 LRP1BQ9NZR2 4599 aa3.98□□□□□ -1.77
CTSC-203ENST00000524463 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
CTSC-203ENST00000524463 DNAH17Q9UFH2 4485 aa3.96□□□□□ -1.78
CTSC-203ENST00000524463 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
CTSC-203ENST00000524463 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
CTSC-203ENST00000524463 FAT1Q14517 4588 aa3.94□□□□□ -1.78
CTSC-203ENST00000524463 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
CTSC-203ENST00000524463 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
CTSC-203ENST00000524463 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
CTSC-203ENST00000524463 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
CTSC-203ENST00000524463 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
CTSC-203ENST00000524463 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
CTSC-203ENST00000524463 KMT2AQ03164 3969 aa3.92□□□□□ -1.78
CTSC-203ENST00000524463 SPRR2DP22532 72 aa3.92□□□□□ -1.78
CTSC-203ENST00000524463 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
CTSC-203ENST00000524463 FRAS1Q86XX4 4008 aa3.89□□□□□ -1.79
CTSC-203ENST00000524463 RYR1P21817 5038 aa3.88□□□□□ -1.79
CTSC-203ENST00000524463 DYNC2H1Q8NCM8 4307 aaKnown RBP3.87□□□□□ -1.79
CTSC-203ENST00000524463 MT1GP13640 62 aa3.86□□□□□ -1.79
CTSC-203ENST00000524463 PRKDCP78527 4128 aaKnown RBP3.85□□□□□ -1.79
CTSC-203ENST00000524463 LYSTQ99698 3801 aa3.83□□□□□ -1.8
CTSC-203ENST00000524463 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
CTSC-203ENST00000524463 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
CTSC-203ENST00000524463 LCE2BO14633 110 aa3.8□□□□□ -1.8
CTSC-203ENST00000524463 APOBP04114 4563 aaKnown RBP3.79□□□□□ -1.8
CTSC-203ENST00000524463 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
CTSC-203ENST00000524463 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
CTSC-203ENST00000524463 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
CTSC-203ENST00000524463 DNAH6Q9C0G6 4158 aa3.72□□□□□ -1.81
CTSC-203ENST00000524463 RYR3Q15413 4870 aa3.71□□□□□ -1.82
CTSC-203ENST00000524463 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
CTSC-203ENST00000524463 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
CTSC-203ENST00000524463 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
CTSC-203ENST00000524463 MT1XP80297 61 aa3.67□□□□□ -1.82
CTSC-203ENST00000524463 LPAP08519 4548 aa3.61□□□□□ -1.83
CTSC-203ENST00000524463 MT4P47944 62 aa3.61□□□□□ -1.83
CTSC-203ENST00000524463 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
CTSC-203ENST00000524463 MYCBP2O75592 4640 aa3.6□□□□□ -1.83
CTSC-203ENST00000524463 MT1BP07438 61 aa3.6□□□□□ -1.83
CTSC-203ENST00000524463 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
CTSC-203ENST00000524463 LCE2DQ5TA82 110 aaPredicted RBP3.58□□□□□ -1.84
CTSC-203ENST00000524463 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
CTSC-203ENST00000524463 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
CTSC-203ENST00000524463 LRP1Q07954 4544 aaKnown RBP3.56□□□□□ -1.84
CTSC-203ENST00000524463 HECTD4Q9Y4D8 3996 aa3.54□□□□□ -1.84
CTSC-203ENST00000524463 HSPG2P98160 4391 aa3.54□□□□□ -1.84
CTSC-203ENST00000524463 PKHD1L1Q86WI1 4243 aa3.51□□□□□ -1.85
CTSC-203ENST00000524463 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
CTSC-203ENST00000524463 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
CTSC-203ENST00000524463 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
CTSC-203ENST00000524463 PKHD1P08F94 4074 aa3.45□□□□□ -1.86
CTSC-203ENST00000524463 PKD1P98161 4303 aa3.44□□□□□ -1.86
CTSC-203ENST00000524463 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
CTSC-203ENST00000524463 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
CTSC-203ENST00000524463 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CTSC-203ENST00000524463 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
CTSC-203ENST00000524463 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
CTSC-203ENST00000524463 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
CTSC-203ENST00000524463 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
CTSC-203ENST00000524463 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
CTSC-203ENST00000524463 HERC1Q15751 4861 aa3.37□□□□□ -1.87
CTSC-203ENST00000524463 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
CTSC-203ENST00000524463 KIAA1109Q2LD37 5005 aa3.35□□□□□ -1.87
CTSC-203ENST00000524463 RYR2Q92736 4967 aa3.35□□□□□ -1.87
CTSC-203ENST00000524463 MT1LQ93083 61 aa3.34□□□□□ -1.88
CTSC-203ENST00000524463 LRP2P98164 4655 aa3.32□□□□□ -1.88
CTSC-203ENST00000524463 MT1EP04732 61 aa3.31□□□□□ -1.88
CTSC-203ENST00000524463 HERC2O95714 4834 aa3.3□□□□□ -1.88
CTSC-203ENST00000524463 TNXBP22105 4242 aa3.29□□□□□ -1.88
CTSC-203ENST00000524463 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
CTSC-203ENST00000524463 BIRC6Q9NR09 4857 aa3.27□□□□□ -1.89
CTSC-203ENST00000524463 PRM1P04553 51 aa3.26□□□□□ -1.89
CTSC-203ENST00000524463 MT1MQ8N339 61 aa3.25□□□□□ -1.89
CTSC-203ENST00000524463 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms