RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
SMARCE1P4-201ENST00000523647 ZANQ9Y493 2812 aa0.59□□□□□ -2.32
SMARCE1P4-201ENST00000523647 DNAH7Q8WXX0 4024 aa0.58□□□□□ -2.32
SMARCE1P4-201ENST00000523647 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 LRP1BQ9NZR2 4599 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 ACACBO00763 2458 aa0.57□□□□□ -2.32
SMARCE1P4-201ENST00000523647 COL6A3P12111 3177 aa0.56□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TMEM167AQ8TBQ9 72 aa0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 HTTP42858 3142 aa0.55□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SVEP1Q4LDE5 3571 aa0.54□□□□□ -2.32
SMARCE1P4-201ENST00000523647 FAT4Q6V0I7 4981 aa0.54□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SMR3BP02814 79 aaPredicted RBP0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 SPRR2EP22531 72 aa0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 KRTAP19-5Q3LI72 72 aa0.53□□□□□ -2.32
SMARCE1P4-201ENST00000523647 TRIOO75962 3097 aa0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 SPG11Q96JI7 2443 aa0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FASNP49327 2511 aaKnown RBP0.53□□□□□ -2.33
SMARCE1P4-201ENST00000523647 DNAH1Q9P2D7 4330 aa0.52□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MAP1AP78559 2803 aaPredicted RBP0.51□□□□□ -2.33
SMARCE1P4-201ENST00000523647 HMCN2Q8NDA2 5059 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 WDR87Q6ZQQ6 2873 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 TGP01266 2768 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 SPRR2FQ96RM1 72 aa0.5□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FLNAP21333 2647 aaKnown RBP0.49□□□□□ -2.33
SMARCE1P4-201ENST00000523647 FAT1Q14517 4588 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MXRA5Q9NR99 2828 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
SMARCE1P4-201ENST00000523647 ITPR1Q14643 2758 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 MGAQ8IWI9 3026 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 RELNP78509 3460 aa0.47□□□□□ -2.33
SMARCE1P4-201ENST00000523647 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 AHNAK2Q8IVF2 5795 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 MAST4O15021 2626 aa0.46□□□□□ -2.34
SMARCE1P4-201ENST00000523647 TLN2Q9Y4G6 2542 aa0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 LAMA1P25391 3075 aa0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
SMARCE1P4-201ENST00000523647 CFAP54Q96N23 3096 aa0.44□□□□□ -2.34
SMARCE1P4-201ENST00000523647 DMXL2Q8TDJ6 3036 aa0.43□□□□□ -2.34
SMARCE1P4-201ENST00000523647 LRP2P98164 4655 aa0.43□□□□□ -2.34
SMARCE1P4-201ENST00000523647 RHPN1-AS1Q9BWJ2 59 aa0.41□□□□□ -2.34
SMARCE1P4-201ENST00000523647 MGAM2Q2M2H8 2515 aa0.4□□□□□ -2.34
SMARCE1P4-201ENST00000523647 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.34
SMARCE1P4-201ENST00000523647 RPL39P5Q59GN2 51 aa0.4□□□□□ -2.35
SMARCE1P4-201ENST00000523647 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
SMARCE1P4-201ENST00000523647 H3BUX3 64 aa0.39□□□□□ -2.35
SMARCE1P4-201ENST00000523647 CMYA5Q8N3K9 4069 aa0.38□□□□□ -2.35
SMARCE1P4-201ENST00000523647 LAMA3Q16787 3333 aa0.38□□□□□ -2.35
SMARCE1P4-201ENST00000523647 NBEAL1Q6ZS30 2694 aa0.36□□□□□ -2.35
SMARCE1P4-201ENST00000523647 SMG1Q96Q15 3661 aaKnown RBP0.36□□□□□ -2.35
SMARCE1P4-201ENST00000523647 ATMQ13315 3056 aa0.34□□□□□ -2.35
SMARCE1P4-201ENST00000523647 DEFB1P60022 68 aa0.34□□□□□ -2.36
SMARCE1P4-201ENST00000523647 STAB2Q8WWQ8 2551 aa0.34□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB108AA8MXU0 73 aa0.33□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DYNC1H1Q14204 4646 aaKnown RBP0.33□□□□□ -2.36
SMARCE1P4-201ENST00000523647 A0A096LNI7 61 aa0.32□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DNAH17Q9UFH2 4485 aa0.32□□□□□ -2.36
SMARCE1P4-201ENST00000523647 LRBAP50851 2863 aa0.31□□□□□ -2.36
SMARCE1P4-201ENST00000523647 TRRAPQ9Y4A5 3859 aa0.31□□□□□ -2.36
SMARCE1P4-201ENST00000523647 NIPBLQ6KC79 2804 aaeCLIP0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB136Q30KP8 78 aa0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 DEFB124Q8NES8 71 aa0.3□□□□□ -2.36
SMARCE1P4-201ENST00000523647 CEP250Q9BV73 2442 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 HERC1Q15751 4861 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 MDN1Q9NU22 5596 aa0.29□□□□□ -2.36
SMARCE1P4-201ENST00000523647 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.36
SMARCE1P4-201ENST00000523647 MT1HP80294 61 aa0.28□□□□□ -2.36
SMARCE1P4-201ENST00000523647 C5orf42Q9H799 3197 aa0.28□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MUC5BQ9HC84 5762 aaPredicted RBP0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MUC17Q685J3 4493 aa0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DNAH12Q6ZR08 3092 aa0.27□□□□□ -2.37
SMARCE1P4-201ENST00000523647 MT1EP04732 61 aa0.25□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DNAH5Q8TE73 4624 aa0.25□□□□□ -2.37
SMARCE1P4-201ENST00000523647 FRYLO94915 3013 aa0.24□□□□□ -2.37
SMARCE1P4-201ENST00000523647 SPTAN1Q13813 2472 aaKnown RBP0.24□□□□□ -2.37
SMARCE1P4-201ENST00000523647 PRUNE2Q8WUY3 3088 aa0.23□□□□□ -2.37
SMARCE1P4-201ENST00000523647 SSPOA2VEC9 5147 aa0.22□□□□□ -2.37
SMARCE1P4-201ENST00000523647 DMDP11532 3685 aa0.22□□□□□ -2.37
SMARCE1P4-201ENST00000523647 KMT2DO14686 5537 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 VPS13CQ709C8 3753 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 ITPR2Q14571 2701 aa0.21□□□□□ -2.38
SMARCE1P4-201ENST00000523647 DOPEY1Q5JWR5 2465 aa0.2□□□□□ -2.38
SMARCE1P4-201ENST00000523647 MT1LQ93083 61 aa0.19□□□□□ -2.38
SMARCE1P4-201ENST00000523647 MUC5ACP98088 5654 aa0.18□□□□□ -2.38
SMARCE1P4-201ENST00000523647 CSMD2Q7Z408 3487 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 STARD9Q9P2P6 4700 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 PCLOQ9Y6V0 5065 aa0.17□□□□□ -2.38
SMARCE1P4-201ENST00000523647 APELAP0DMC3 54 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 HTN1P15515 57 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 DEFB133Q30KQ1 61 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 CFAP46Q8IYW2 2715 aa0.16□□□□□ -2.38
SMARCE1P4-201ENST00000523647 SRCAPQ6ZRS2 3230 aa0.15□□□□□ -2.39
SMARCE1P4-201ENST00000523647 RPS29P62273 56 aaKnown RBP0.14□□□□□ -2.39
SMARCE1P4-201ENST00000523647 KMT2CQ8NEZ4 4911 aaKnown RBP0.14□□□□□ -2.39
SMARCE1P4-201ENST00000523647 MUC3AQ02505 3323 aa0.13□□□□□ -2.39
SMARCE1P4-201ENST00000523647 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
SMARCE1P4-201ENST00000523647 SZT2Q5T011 3432 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms