RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	LINC00575	Q6W349	94 aa		2.99	□□□□□ -1.93
PABPC1-223	ENST00000523636	ST20-AS1	Q8NBB2	130 aa		2.99	□□□□□ -1.93
PABPC1-223	ENST00000523636	UBL5	Q9BZL1	73 aa		2.99	□□□□□ -1.93
PABPC1-223	ENST00000523636	KLK12	Q9UKR0	248 aa		2.99	□□□□□ -1.93
PABPC1-223	ENST00000523636	NCR3	O14931	201 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	KRTAP10-12	P60413	245 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	KRTAP25-1	Q3LHN0	102 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	TMEM254	Q8TBM7	123 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	C22orf24	Q9Y442	160 aa		2.98	□□□□□ -1.93
PABPC1-223	ENST00000523636	LOC110117498	A0A087WWA1	95 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	CHKB-CPT1B	H3BT56	60 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	PSCA	O43653	123 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	ZNF861P	O60384	105 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	IGLV6-57	P01721	117 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	ENHO	Q6UWT2	76 aa		2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	2.97	□□□□□ -1.93
PABPC1-223	ENST00000523636	TRAV23DV6	A0A075B6W5	121 aa		2.96	□□□□□ -1.94
PABPC1-223	ENST00000523636	IGKV3D-7	A0A0C4DH55	119 aa		2.96	□□□□□ -1.94
PABPC1-223	ENST00000523636		A8MU10	97 aa		2.96	□□□□□ -1.94
PABPC1-223	ENST00000523636	COX7B	P24311	80 aa		2.96	□□□□□ -1.94
PABPC1-223	ENST00000523636	LINC00846	Q9NV44	126 aa		2.96	□□□□□ -1.94
PABPC1-223	ENST00000523636		A0A087WVE0	104 aa		2.95	□□□□□ -1.94
PABPC1-223	ENST00000523636	C6orf48	Q9UBA6	75 aa		2.95	□□□□□ -1.94
PABPC1-223	ENST00000523636	NDUFB1	O75438	58 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	LINC00483	Q53H64	154 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	LINC01556	Q5JQF7	62 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	KRTAP26-1	Q6PEX3	210 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	WFDC10B	Q8IUB3	73 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	C9orf163	Q8N9P6	203 aa		2.94	□□□□□ -1.94
PABPC1-223	ENST00000523636	IGKV2D-24	A0A075B6R9	120 aa		2.93	□□□□□ -1.94
PABPC1-223	ENST00000523636		Q6ZQY7	126 aa		2.93	□□□□□ -1.94
PABPC1-223	ENST00000523636		Q9BRP9	147 aa		2.93	□□□□□ -1.94
PABPC1-223	ENST00000523636	SNURF	Q9Y675	71 aa		2.93	□□□□□ -1.94
PABPC1-223	ENST00000523636		A0A1W2PNM2	257 aa		2.91	□□□□□ -1.94
PABPC1-223	ENST00000523636	CSAG1	Q6PB30	78 aa		2.91	□□□□□ -1.94
PABPC1-223	ENST00000523636	KCNQ1DN	Q9H478	68 aa		2.91	□□□□□ -1.94
PABPC1-223	ENST00000523636	NREP	Q16612	68 aa		2.9	□□□□□ -1.95
PABPC1-223	ENST00000523636	ETDC	A0A1B0GVM5	59 aa		2.89	□□□□□ -1.95
PABPC1-223	ENST00000523636	CNBP	P62633	177 aa	Known RBP	2.89	□□□□□ -1.95
PABPC1-223	ENST00000523636	KRTAP10-5	P60370	271 aa		2.88	□□□□□ -1.95
PABPC1-223	ENST00000523636	IGLV5-48	A0A075B6I7	105 aa		2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636	DEFB105A	Q8NG35	78 aa		2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636	ZCCHC13	Q8WW36	166 aa	Known RBP	2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636	PLAC8	Q9NZF1	115 aa		2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636	LINC01558	Q9Y6Z2	57 aa		2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636		R4GN34	69 aa		2.87	□□□□□ -1.95
PABPC1-223	ENST00000523636	KRTAP2-3	P0C7H8	128 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636	C1orf137	Q5JT78	98 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636	SPINK6	Q6UWN8	80 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636		Q6ZRX8	168 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636	HIGD2A	Q9BW72	106 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636	KRTAP2-4	Q9BYR9	128 aa		2.86	□□□□□ -1.95
PABPC1-223	ENST00000523636	SPRR1A	P35321	89 aa		2.85	□□□□□ -1.95
PABPC1-223	ENST00000523636	DMAC1	Q96GE9	116 aa		2.85	□□□□□ -1.95
PABPC1-223	ENST00000523636	PRR15L	Q9BU68	103 aa		2.85	□□□□□ -1.95
PABPC1-223	ENST00000523636	LCE3C	Q5T5A8	94 aa		2.84	□□□□□ -1.95
PABPC1-223	ENST00000523636	KRTAP1-4	P0C5Y4	121 aa		2.83	□□□□□ -1.96
PABPC1-223	ENST00000523636	SPINT4	Q6UDR6	99 aa		2.83	□□□□□ -1.96
PABPC1-223	ENST00000523636	PRO2289	Q9P1D8	64 aa		2.83	□□□□□ -1.96
PABPC1-223	ENST00000523636	LINC00208	Q96KT6	92 aa		2.82	□□□□□ -1.96
PABPC1-223	ENST00000523636	SPRR4	Q96PI1	79 aa		2.82	□□□□□ -1.96
PABPC1-223	ENST00000523636	PSORS1C2	Q9UIG4	136 aa		2.82	□□□□□ -1.96
PABPC1-223	ENST00000523636	IGKV4-1	P06312	121 aa		2.8	□□□□□ -1.96
PABPC1-223	ENST00000523636	KRTAP19-6	Q3LI70	58 aa		2.8	□□□□□ -1.96
PABPC1-223	ENST00000523636	SPAG11A	Q6PDA7	123 aa		2.8	□□□□□ -1.96
PABPC1-223	ENST00000523636	TPRXL	Q17RH7	258 aa		2.79	□□□□□ -1.96
PABPC1-223	ENST00000523636	IGKV2-24	A0A0C4DH68	120 aa		2.78	□□□□□ -1.96
PABPC1-223	ENST00000523636	SPRR1B	P22528	89 aa		2.78	□□□□□ -1.96
PABPC1-223	ENST00000523636	SPACA4	Q8TDM5	124 aa		2.78	□□□□□ -1.96
PABPC1-223	ENST00000523636		A0A096LNI7	61 aa		2.77	□□□□□ -1.97
PABPC1-223	ENST00000523636		A0A1W2PNN7	141 aa		2.77	□□□□□ -1.97
PABPC1-223	ENST00000523636	SPATA8	Q6RVD6	105 aa		2.77	□□□□□ -1.97
PABPC1-223	ENST00000523636	IGFL1	Q6UW32	110 aa		2.77	□□□□□ -1.97
PABPC1-223	ENST00000523636	HRES1	P13985	223 aa		2.76	□□□□□ -1.97
PABPC1-223	ENST00000523636		Q8N9L7	120 aa		2.76	□□□□□ -1.97
PABPC1-223	ENST00000523636		H0Y9P7	68 aa		2.75	□□□□□ -1.97
PABPC1-223	ENST00000523636	PRLH	P81277	87 aa		2.75	□□□□□ -1.97
PABPC1-223	ENST00000523636	UQCR11	O14957	56 aa		2.74	□□□□□ -1.97
PABPC1-223	ENST00000523636		A0A0G2JQZ4	141 aa		2.73	□□□□□ -1.97
PABPC1-223	ENST00000523636		K7EQZ3	153 aa		2.73	□□□□□ -1.97
PABPC1-223	ENST00000523636		M0R2T5	61 aa		2.73	□□□□□ -1.97
PABPC1-223	ENST00000523636	KRTAP2-1	Q9BYU5	128 aa		2.73	□□□□□ -1.97
PABPC1-223	ENST00000523636	TP53AIP1	Q9HCN2	124 aa		2.73	□□□□□ -1.97
PABPC1-223	ENST00000523636	LINC00472	Q9H8W2	130 aa		2.72	□□□□□ -1.97
PABPC1-223	ENST00000523636	SPINK7	P58062	85 aa		2.71	□□□□□ -1.98
PABPC1-223	ENST00000523636	WFDC13	Q8IUB5	93 aa		2.71	□□□□□ -1.98
PABPC1-223	ENST00000523636	KRTAP5-9	P26371	169 aa		2.7	□□□□□ -1.98
PABPC1-223	ENST00000523636	KRTAP13-1	Q8IUC0	172 aa		2.7	□□□□□ -1.98
PABPC1-223	ENST00000523636	ANAPC11	Q9NYG5	84 aa		2.7	□□□□□ -1.98
PABPC1-223	ENST00000523636	COA5	Q86WW8	74 aa		2.69	□□□□□ -1.98
PABPC1-223	ENST00000523636	AHNAK2	Q8IVF2	5795 aa		2.68	□□□□□ -1.98
PABPC1-223	ENST00000523636	SSBP3-AS1	Q7Z2R9	100 aa		2.68	□□□□□ -1.98
PABPC1-223	ENST00000523636	DST	Q03001	7570 aa	Known RBP	2.68	□□□□□ -1.98
PABPC1-223	ENST00000523636	KRTAP9-6	A8MVA2	160 aa		2.67	□□□□□ -1.98
PABPC1-223	ENST00000523636	KRTAP11-1	Q8IUC1	163 aa		2.67	□□□□□ -1.98
PABPC1-223	ENST00000523636	KRTAP13-3	Q3SY46	172 aa		2.66	□□□□□ -1.98
PABPC1-223	ENST00000523636	HMCN1	Q96RW7	5635 aa		2.66	□□□□□ -1.98
PABPC1-223	ENST00000523636	MMP24-AS1	A0A0U1RRL7	71 aa		2.65	□□□□□ -1.99
PABPC1-223	ENST00000523636	KRTAP5-1	Q6L8H4	278 aa		2.65	□□□□□ -1.99

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