RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	DNAH9	Q9NYC9	4486 aa		4.49	□□□□□ -1.69
TCF7-223	ENST00000522653	MEGF8	Q7Z7M0	2845 aa		4.48	□□□□□ -1.69
TCF7-223	ENST00000522653	CRCT1	Q9UGL9	99 aa		4.47	□□□□□ -1.69
TCF7-223	ENST00000522653	KRTAP12-3	P60328	96 aa		4.46	□□□□□ -1.7
TCF7-223	ENST00000522653	LOR	P23490	312 aa	Predicted RBP	4.45	□□□□□ -1.7
TCF7-223	ENST00000522653	KRTAP19-4	Q3LI73	84 aa		4.44	□□□□□ -1.7
TCF7-223	ENST00000522653	DNAH1	Q9P2D7	4330 aa		4.37	□□□□□ -1.71
TCF7-223	ENST00000522653	KRTAP10-7	P60409	375 aa	Predicted RBP	4.34	□□□□□ -1.71
TCF7-223	ENST00000522653	DNAH11	Q96DT5	4516 aa		4.34	□□□□□ -1.71
TCF7-223	ENST00000522653	COL7A1	Q02388	2944 aa		4.33	□□□□□ -1.72
TCF7-223	ENST00000522653	DNAH10	Q8IVF4	4471 aa		4.33	□□□□□ -1.72
TCF7-223	ENST00000522653	DNAH2	Q9P225	4427 aa		4.32	□□□□□ -1.72
TCF7-223	ENST00000522653	DNAH5	Q8TE73	4624 aa		4.31	□□□□□ -1.72
TCF7-223	ENST00000522653	MT1H	P80294	61 aa		4.31	□□□□□ -1.72
TCF7-223	ENST00000522653	VPS13D	Q5THJ4	4388 aa		4.26	□□□□□ -1.73
TCF7-223	ENST00000522653	PLEC	Q15149	4684 aa	Known RBP	4.26	□□□□□ -1.73
TCF7-223	ENST00000522653	SPRR2F	Q96RM1	72 aa		4.25	□□□□□ -1.73
TCF7-223	ENST00000522653	DNAH17	Q9UFH2	4485 aa		4.24	□□□□□ -1.73
TCF7-223	ENST00000522653	DNHD1	Q96M86	4753 aa		4.24	□□□□□ -1.73
TCF7-223	ENST00000522653	LCE3A	Q5TA76	89 aa		4.23	□□□□□ -1.73
TCF7-223	ENST00000522653	ANK2	Q01484	3957 aa		4.2	□□□□□ -1.74
TCF7-223	ENST00000522653	DYNC1H1	Q14204	4646 aa	Known RBP	4.19	□□□□□ -1.74
TCF7-223	ENST00000522653	DNAH3	Q8TD57	4116 aa		4.18	□□□□□ -1.74
TCF7-223	ENST00000522653	MT2A	P02795	61 aa		4.18	□□□□□ -1.74
TCF7-223	ENST00000522653	SPRR2E	P22531	72 aa		4.16	□□□□□ -1.74
TCF7-223	ENST00000522653	SPRR2B	P35325	72 aa		4.16	□□□□□ -1.74
TCF7-223	ENST00000522653	SPRR2A	P35326	72 aa		4.16	□□□□□ -1.74
TCF7-223	ENST00000522653	SPRR2G	Q9BYE4	73 aa		4.14	□□□□□ -1.75
TCF7-223	ENST00000522653	CSMD3	Q7Z407	3707 aa		4.12	□□□□□ -1.75
TCF7-223	ENST00000522653	STARD9	Q9P2P6	4700 aa		4.12	□□□□□ -1.75
TCF7-223	ENST00000522653	KRTAP10-5	P60370	271 aa		4.11	□□□□□ -1.75
TCF7-223	ENST00000522653	FAT2	Q9NYQ8	4349 aa		4.11	□□□□□ -1.75
TCF7-223	ENST00000522653	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.11	□□□□□ -1.75
TCF7-223	ENST00000522653	LRP1B	Q9NZR2	4599 aa		4.11	□□□□□ -1.75
TCF7-223	ENST00000522653	LCE2B	O14633	110 aa		4.11	□□□□□ -1.75
TCF7-223	ENST00000522653	CMYA5	Q8N3K9	4069 aa		4.1	□□□□□ -1.75
TCF7-223	ENST00000522653	PRKDC	P78527	4128 aa	Known RBP	4.1	□□□□□ -1.75
TCF7-223	ENST00000522653	MYCBP2	O75592	4640 aa		4.1	□□□□□ -1.75
TCF7-223	ENST00000522653	DNAH6	Q9C0G6	4158 aa		4.09	□□□□□ -1.75
TCF7-223	ENST00000522653	SPRR2D	P22532	72 aa		4.08	□□□□□ -1.76
TCF7-223	ENST00000522653	KRTAP4-1	Q9BYQ7	146 aa		4.08	□□□□□ -1.76
TCF7-223	ENST00000522653	HERC1	Q15751	4861 aa		4.07	□□□□□ -1.76
TCF7-223	ENST00000522653	SACS	Q9NZJ4	4579 aa		4.04	□□□□□ -1.76
TCF7-223	ENST00000522653	DNAH8	Q96JB1	4490 aa		4.04	□□□□□ -1.76
TCF7-223	ENST00000522653	KRTAP12-4	P60329	112 aa		4.01	□□□□□ -1.77
TCF7-223	ENST00000522653	MT1F	P04733	61 aa		3.98	□□□□□ -1.77
TCF7-223	ENST00000522653	RYR1	P21817	5038 aa		3.98	□□□□□ -1.77
TCF7-223	ENST00000522653	LCE2C	Q5TA81	110 aa		3.97	□□□□□ -1.77
TCF7-223	ENST00000522653	KMT2A	Q03164	3969 aa		3.96	□□□□□ -1.78
TCF7-223	ENST00000522653	FAT1	Q14517	4588 aa		3.96	□□□□□ -1.78
TCF7-223	ENST00000522653	RYR3	Q15413	4870 aa		3.91	□□□□□ -1.78
TCF7-223	ENST00000522653	SPRR5	A0A1B0GTR4	108 aa		3.91	□□□□□ -1.78
TCF7-223	ENST00000522653	KRTAP19-8	Q3LI54	63 aa		3.9	□□□□□ -1.79
TCF7-223	ENST00000522653	LCE2A	Q5TA79	106 aa	Predicted RBP	3.89	□□□□□ -1.79
TCF7-223	ENST00000522653	RYR2	Q92736	4967 aa		3.88	□□□□□ -1.79
TCF7-223	ENST00000522653	DNAH7	Q8WXX0	4024 aa		3.87	□□□□□ -1.79
TCF7-223	ENST00000522653	KRTAP17-1	Q9BYP8	105 aa		3.86	□□□□□ -1.79
TCF7-223	ENST00000522653	KRTAP19-5	Q3LI72	72 aa		3.86	□□□□□ -1.79
TCF7-223	ENST00000522653	BIRC6	Q9NR09	4857 aa		3.85	□□□□□ -1.79
TCF7-223	ENST00000522653	APOB	P04114	4563 aa	Known RBP	3.84	□□□□□ -1.79
TCF7-223	ENST00000522653	LYST	Q99698	3801 aa		3.84	□□□□□ -1.79
TCF7-223	ENST00000522653	LCE3C	Q5T5A8	94 aa		3.82	□□□□□ -1.8
TCF7-223	ENST00000522653	FAT3	Q8TDW7	4589 aa		3.81	□□□□□ -1.8
TCF7-223	ENST00000522653	MT1G	P13640	62 aa		3.8	□□□□□ -1.8
TCF7-223	ENST00000522653	VPS13B	Q7Z7G8	4022 aa		3.8	□□□□□ -1.8
TCF7-223	ENST00000522653	HYDIN	Q4G0P3	5121 aa		3.78	□□□□□ -1.8
TCF7-223	ENST00000522653	KRTAP9-6	A0A140TA67	174 aa		3.77	□□□□□ -1.81
TCF7-223	ENST00000522653	KRTAP19-1	Q8IUB9	90 aa		3.77	□□□□□ -1.81
TCF7-223	ENST00000522653	KIAA1109	Q2LD37	5005 aa		3.77	□□□□□ -1.81
TCF7-223	ENST00000522653	HECTD4	Q9Y4D8	3996 aa		3.76	□□□□□ -1.81
TCF7-223	ENST00000522653	HSPG2	P98160	4391 aa		3.75	□□□□□ -1.81
TCF7-223	ENST00000522653	FRAS1	Q86XX4	4008 aa		3.73	□□□□□ -1.81
TCF7-223	ENST00000522653	KRTAP9-2	Q9BYQ4	174 aa		3.72	□□□□□ -1.81
TCF7-223	ENST00000522653	LRP1	Q07954	4544 aa	Known RBP	3.7	□□□□□ -1.82
TCF7-223	ENST00000522653	PKHD1L1	Q86WI1	4243 aa		3.69	□□□□□ -1.82
TCF7-223	ENST00000522653	HERC2	O95714	4834 aa		3.68	□□□□□ -1.82
TCF7-223	ENST00000522653	KRTAP20-1	Q3LI63	56 aa		3.65	□□□□□ -1.83
TCF7-223	ENST00000522653	PKHD1	P08F94	4074 aa		3.62	□□□□□ -1.83
TCF7-223	ENST00000522653	PKD1	P98161	4303 aa		3.62	□□□□□ -1.83
TCF7-223	ENST00000522653	KRTAP9-8	Q9BYQ0	159 aa		3.6	□□□□□ -1.83
TCF7-223	ENST00000522653	LRP2	P98164	4655 aa		3.59	□□□□□ -1.83
TCF7-223	ENST00000522653	KRTAP9-3	Q9BYQ3	159 aa		3.59	□□□□□ -1.83
TCF7-223	ENST00000522653	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.58	□□□□□ -1.84
TCF7-223	ENST00000522653	MT1X	P80297	61 aa		3.56	□□□□□ -1.84
TCF7-223	ENST00000522653	KRTAP19-6	Q3LI70	58 aa		3.56	□□□□□ -1.84
TCF7-223	ENST00000522653	LCE3B	Q5TA77	95 aa		3.56	□□□□□ -1.84
TCF7-223	ENST00000522653	PCLO	Q9Y6V0	5065 aa		3.56	□□□□□ -1.84
TCF7-223	ENST00000522653	KRTAP19-3	Q7Z4W3	81 aa		3.56	□□□□□ -1.84
TCF7-223	ENST00000522653	MT1B	P07438	61 aa		3.55	□□□□□ -1.84
TCF7-223	ENST00000522653	KRTAP2-3	P0C7H8	128 aa		3.49	□□□□□ -1.85
TCF7-223	ENST00000522653	KRTAP2-4	Q9BYR9	128 aa		3.49	□□□□□ -1.85
TCF7-223	ENST00000522653	MT3	P25713	68 aa		3.48	□□□□□ -1.85
TCF7-223	ENST00000522653	KRTAP9-7	A8MTY7	169 aa		3.47	□□□□□ -1.85
TCF7-223	ENST00000522653	EPPK1	P58107	5090 aa	Known RBP	3.47	□□□□□ -1.85
TCF7-223	ENST00000522653	KRTAP6-3	Q3LI67	103 aa		3.47	□□□□□ -1.85
TCF7-223	ENST00000522653	MUC17	Q685J3	4493 aa		3.44	□□□□□ -1.86
TCF7-223	ENST00000522653	TNXB	P22105	4242 aa		3.44	□□□□□ -1.86
TCF7-223	ENST00000522653	KRTAP19-2	Q3LHN2	52 aa		3.43	□□□□□ -1.86
TCF7-223	ENST00000522653	MT1L	Q93083	61 aa		3.43	□□□□□ -1.86
TCF7-223	ENST00000522653	LCE3D	Q9BYE3	92 aa		3.43	□□□□□ -1.86

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms