RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 MT4P47944 62 aa-0.42□□□□□ -2.48
PTPN12-214ENST00000520947 ITPR2Q14571 2701 aa-0.42□□□□□ -2.48
PTPN12-214ENST00000520947 DNAH11Q96DT5 4516 aa-0.42□□□□□ -2.48
PTPN12-214ENST00000520947 MMP24-AS1A0A0U1RRL7 71 aa-0.43□□□□□ -2.48
PTPN12-214ENST00000520947 TEX15Q9BXT5 2789 aa-0.43□□□□□ -2.48
PTPN12-214ENST00000520947 NIPBLQ6KC79 2804 aaeCLIP-0.43□□□□□ -2.48
PTPN12-214ENST00000520947 CELSR3Q9NYQ7 3312 aa-0.43□□□□□ -2.48
PTPN12-214ENST00000520947 DNAH1Q9P2D7 4330 aa-0.45□□□□□ -2.48
PTPN12-214ENST00000520947 LINC00308Q8TCZ7 52 aa-0.45□□□□□ -2.48
PTPN12-214ENST00000520947 A0A0C4DFX4 3053 aa-0.46□□□□□ -2.48
PTPN12-214ENST00000520947 TLN2Q9Y4G6 2542 aa-0.46□□□□□ -2.48
PTPN12-214ENST00000520947 LAMA3Q16787 3333 aa-0.47□□□□□ -2.48
PTPN12-214ENST00000520947 TNP1P09430 55 aa-0.47□□□□□ -2.48
PTPN12-214ENST00000520947 ABRACLQ9P1F3 81 aa-0.47□□□□□ -2.48
PTPN12-214ENST00000520947 H0YGX0 51 aa-0.48□□□□□ -2.49
PTPN12-214ENST00000520947 MYO15AQ9UKN7 3530 aa-0.48□□□□□ -2.49
PTPN12-214ENST00000520947 CEP295Q9C0D2 2601 aa-0.49□□□□□ -2.49
PTPN12-214ENST00000520947 DNAH2Q9P225 4427 aa-0.49□□□□□ -2.49
PTPN12-214ENST00000520947 DNAH8Q96JB1 4490 aa-0.5□□□□□ -2.49
PTPN12-214ENST00000520947 SPENQ96T58 3664 aaKnown RBP-0.5□□□□□ -2.49
PTPN12-214ENST00000520947 TRIOO75962 3097 aa-0.5□□□□□ -2.49
PTPN12-214ENST00000520947 SYCP2Q9BX26 1530 aa-0.5□□□□□ -2.49
PTPN12-214ENST00000520947 MYO9AB2RTY4 2548 aa-0.5□□□□□ -2.49
PTPN12-214ENST00000520947 EFCAB6Q5THR3 1501 aa-0.51□□□□□ -2.49
PTPN12-214ENST00000520947 C5orf42Q9H799 3197 aa-0.51□□□□□ -2.49
PTPN12-214ENST00000520947 FRYQ5TBA9 3013 aa-0.51□□□□□ -2.49
PTPN12-214ENST00000520947 M0QY20 66 aa-0.52□□□□□ -2.49
PTPN12-214ENST00000520947 KRTAP19-5Q3LI72 72 aa-0.52□□□□□ -2.49
PTPN12-214ENST00000520947 ADCY10Q96PN6 1610 aa-0.53□□□□□ -2.49
PTPN12-214ENST00000520947 DNAH7Q8WXX0 4024 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 CMYA5Q8N3K9 4069 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 RELNP78509 3460 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 SMIM27A0A1W2PRY6 76 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 KAAG1Q9UBP8 84 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 CFAP46Q8IYW2 2715 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 AGLP35573 1532 aa-0.54□□□□□ -2.5
PTPN12-214ENST00000520947 A0A1B0GUL6 1792 aa-0.55□□□□□ -2.5
PTPN12-214ENST00000520947 KIF21BO75037 1637 aa-0.55□□□□□ -2.5
PTPN12-214ENST00000520947 PLNP26678 52 aa-0.55□□□□□ -2.5
PTPN12-214ENST00000520947 MT1HP80294 61 aa-0.55□□□□□ -2.5
PTPN12-214ENST00000520947 PLECQ15149 4684 aaKnown RBP-0.56□□□□□ -2.5
PTPN12-214ENST00000520947 DMXL2Q8TDJ6 3036 aa-0.56□□□□□ -2.5
PTPN12-214ENST00000520947 ABCA5Q8WWZ7 1642 aa-0.56□□□□□ -2.5
PTPN12-214ENST00000520947 DEFB1P60022 68 aa-0.56□□□□□ -2.5
PTPN12-214ENST00000520947 SPTBN5Q9NRC6 3674 aaKnown RBP-0.57□□□□□ -2.5
PTPN12-214ENST00000520947 CLPSL2Q6UWE3 100 aa-0.57□□□□□ -2.5
PTPN12-214ENST00000520947 TLN1Q9Y490 2541 aaKnown RBP-0.57□□□□□ -2.5
PTPN12-214ENST00000520947 SPTAN1Q13813 2472 aaKnown RBP-0.57□□□□□ -2.5
PTPN12-214ENST00000520947 PREX2Q70Z35 1606 aa-0.57□□□□□ -2.5
PTPN12-214ENST00000520947 A8MTW9 85 aa-0.58□□□□□ -2.5
PTPN12-214ENST00000520947 M0QZ58 72 aa-0.58□□□□□ -2.5
PTPN12-214ENST00000520947 DYNC1H1Q14204 4646 aaKnown RBP-0.59□□□□□ -2.5
PTPN12-214ENST00000520947 SMR3BP02814 79 aaPredicted RBP-0.59□□□□□ -2.5
PTPN12-214ENST00000520947 KRTAP8-1Q8IUC2 63 aa-0.59□□□□□ -2.5
PTPN12-214ENST00000520947 LMO7Q8WWI1 1683 aa-0.59□□□□□ -2.5
PTPN12-214ENST00000520947 FAM208AQ9UK61 1670 aaKnown RBP-0.59□□□□□ -2.5
PTPN12-214ENST00000520947 WFDC10BQ8IUB3 73 aa-0.6□□□□□ -2.51
PTPN12-214ENST00000520947 SRCAPQ6ZRS2 3230 aa-0.6□□□□□ -2.51
PTPN12-214ENST00000520947 LRBAP50851 2863 aa-0.6□□□□□ -2.51
PTPN12-214ENST00000520947 KRTAP19-6Q3LI70 58 aa-0.61□□□□□ -2.51
PTPN12-214ENST00000520947 ABCC8Q09428 1581 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 TRRAPQ9Y4A5 3859 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 ZFHX4Q86UP3 3567 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 DNAH5Q8TE73 4624 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 NRXN3Q9Y4C0 1643 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 CSMD2Q7Z408 3487 aa-0.62□□□□□ -2.51
PTPN12-214ENST00000520947 MROH2AA6NES4 1674 aa-0.63□□□□□ -2.51
PTPN12-214ENST00000520947 CHD7Q9P2D1 2997 aa-0.63□□□□□ -2.51
PTPN12-214ENST00000520947 MGAQ8IWI9 3026 aa-0.64□□□□□ -2.51
PTPN12-214ENST00000520947 ADGRG4Q8IZF6 3080 aa-0.64□□□□□ -2.51
PTPN12-214ENST00000520947 CMC2Q9NRP2 79 aa-0.64□□□□□ -2.51
PTPN12-214ENST00000520947 FANCD2Q9BXW9 1451 aa-0.65□□□□□ -2.51
PTPN12-214ENST00000520947 CSMD1Q96PZ7 3565 aa-0.66□□□□□ -2.51
PTPN12-214ENST00000520947 DCHS1Q96JQ0 3298 aa-0.66□□□□□ -2.51
PTPN12-214ENST00000520947 WDFY4Q6ZS81 3184 aa-0.66□□□□□ -2.51
PTPN12-214ENST00000520947 MT1XP80297 61 aa-0.66□□□□□ -2.52
PTPN12-214ENST00000520947 DNAH17Q9UFH2 4485 aa-0.67□□□□□ -2.52
PTPN12-214ENST00000520947 UNC80Q8N2C7 3258 aa-0.67□□□□□ -2.52
PTPN12-214ENST00000520947 DNAH10Q8IVF4 4471 aa-0.68□□□□□ -2.52
PTPN12-214ENST00000520947 BOD1L1Q8NFC6 3051 aa-0.68□□□□□ -2.52
PTPN12-214ENST00000520947 MT1EP04732 61 aa-0.69□□□□□ -2.52
PTPN12-214ENST00000520947 DEFB131AP59861 70 aa-0.69□□□□□ -2.52
PTPN12-214ENST00000520947 EYSQ5T1H1 3165 aa-0.69□□□□□ -2.52
PTPN12-214ENST00000520947 LOC400499M0QZD8 3231 aa-0.7□□□□□ -2.52
PTPN12-214ENST00000520947 LINC01546A6NGU7 62 aa-0.71□□□□□ -2.52
PTPN12-214ENST00000520947 SPEGQ15772 3267 aa-0.72□□□□□ -2.52
PTPN12-214ENST00000520947 CRYBG3Q68DQ2 2970 aa-0.72□□□□□ -2.52
PTPN12-214ENST00000520947 MT1LQ93083 61 aa-0.72□□□□□ -2.52
PTPN12-214ENST00000520947 CENPEQ02224 2701 aa-0.72□□□□□ -2.52
PTPN12-214ENST00000520947 SPART-AS1P0CW21 52 aa-0.74□□□□□ -2.53
PTPN12-214ENST00000520947 TFF3Q07654 80 aa-0.74□□□□□ -2.53
PTPN12-214ENST00000520947 IQGAP1P46940 1657 aa-0.75□□□□□ -2.53
PTPN12-214ENST00000520947 FREM2Q5SZK8 3169 aa-0.75□□□□□ -2.53
PTPN12-214ENST00000520947 SMIM2Q9BVW6 85 aa-0.75□□□□□ -2.53
PTPN12-214ENST00000520947 DDX60Q8IY21 1712 aaKnown RBP-0.75□□□□□ -2.53
PTPN12-214ENST00000520947 SMG1Q96Q15 3661 aaKnown RBP-0.76□□□□□ -2.53
PTPN12-214ENST00000520947 CFAP54Q96N23 3096 aa-0.76□□□□□ -2.53
PTPN12-214ENST00000520947 SZT2Q5T011 3432 aa-0.77□□□□□ -2.53
PTPN12-214ENST00000520947 PRUNE2Q8WUY3 3088 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms