RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 SVEP1Q4LDE5 3571 aa4.42□□□□□ -1.7
SHPRH-208ENST00000520752 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
SHPRH-208ENST00000520752 VPS13CQ709C8 3753 aa4.4□□□□□ -1.7
SHPRH-208ENST00000520752 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
SHPRH-208ENST00000520752 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
SHPRH-208ENST00000520752 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
SHPRH-208ENST00000520752 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
SHPRH-208ENST00000520752 A0A0D9SG42 100 aa4.38□□□□□ -1.71
SHPRH-208ENST00000520752 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
SHPRH-208ENST00000520752 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
SHPRH-208ENST00000520752 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
SHPRH-208ENST00000520752 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
SHPRH-208ENST00000520752 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
SHPRH-208ENST00000520752 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
SHPRH-208ENST00000520752 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
SHPRH-208ENST00000520752 M0QZ58 72 aa4.31□□□□□ -1.72
SHPRH-208ENST00000520752 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
SHPRH-208ENST00000520752 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
SHPRH-208ENST00000520752 ANK2Q01484 3957 aa4.29□□□□□ -1.72
SHPRH-208ENST00000520752 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
SHPRH-208ENST00000520752 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
SHPRH-208ENST00000520752 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
SHPRH-208ENST00000520752 INE1O15225 51 aa4.26□□□□□ -1.73
SHPRH-208ENST00000520752 DNAH8Q96JB1 4490 aa4.25□□□□□ -1.73
SHPRH-208ENST00000520752 TENM1Q9UKZ4 2725 aa4.24□□□□□ -1.73
SHPRH-208ENST00000520752 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
SHPRH-208ENST00000520752 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
SHPRH-208ENST00000520752 VWFP04275 2813 aa4.19□□□□□ -1.74
SHPRH-208ENST00000520752 TRRAPQ9Y4A5 3859 aa4.19□□□□□ -1.74
SHPRH-208ENST00000520752 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
SHPRH-208ENST00000520752 PRKDCP78527 4128 aaKnown RBP4.17□□□□□ -1.74
SHPRH-208ENST00000520752 RYR3Q15413 4870 aa4.16□□□□□ -1.74
SHPRH-208ENST00000520752 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.74
SHPRH-208ENST00000520752 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
SHPRH-208ENST00000520752 DYNC2H1Q8NCM8 4307 aaKnown RBP4.14□□□□□ -1.75
SHPRH-208ENST00000520752 DNAH10Q8IVF4 4471 aa4.13□□□□□ -1.75
SHPRH-208ENST00000520752 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
SHPRH-208ENST00000520752 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
SHPRH-208ENST00000520752 DNAH17Q9UFH2 4485 aa4.11□□□□□ -1.75
SHPRH-208ENST00000520752 R4GN34 69 aa4.1□□□□□ -1.75
SHPRH-208ENST00000520752 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
SHPRH-208ENST00000520752 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
SHPRH-208ENST00000520752 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
SHPRH-208ENST00000520752 C9orf92A6NGG3 77 aa4.05□□□□□ -1.76
SHPRH-208ENST00000520752 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
SHPRH-208ENST00000520752 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SHPRH-208ENST00000520752 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
SHPRH-208ENST00000520752 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
SHPRH-208ENST00000520752 DNAH6Q9C0G6 4158 aa4.02□□□□□ -1.77
SHPRH-208ENST00000520752 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
SHPRH-208ENST00000520752 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
SHPRH-208ENST00000520752 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
SHPRH-208ENST00000520752 HUWE1Q7Z6Z7 4374 aaKnown RBP4□□□□□ -1.77
SHPRH-208ENST00000520752 LYSTQ99698 3801 aa3.99□□□□□ -1.77
SHPRH-208ENST00000520752 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
SHPRH-208ENST00000520752 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
SHPRH-208ENST00000520752 CSMD3Q7Z407 3707 aa3.96□□□□□ -1.78
SHPRH-208ENST00000520752 Q5VSD8 79 aa3.96□□□□□ -1.78
SHPRH-208ENST00000520752 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
SHPRH-208ENST00000520752 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
SHPRH-208ENST00000520752 SACSQ9NZJ4 4579 aa3.95□□□□□ -1.78
SHPRH-208ENST00000520752 RYR1P21817 5038 aa3.93□□□□□ -1.78
SHPRH-208ENST00000520752 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SHPRH-208ENST00000520752 HECTD4Q9Y4D8 3996 aa3.9□□□□□ -1.79
SHPRH-208ENST00000520752 RYR2Q92736 4967 aa3.88□□□□□ -1.79
SHPRH-208ENST00000520752 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
SHPRH-208ENST00000520752 HERC2O95714 4834 aa3.83□□□□□ -1.8
SHPRH-208ENST00000520752 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
SHPRH-208ENST00000520752 TNP1P09430 55 aa3.82□□□□□ -1.8
SHPRH-208ENST00000520752 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
SHPRH-208ENST00000520752 PLECQ15149 4684 aaKnown RBP3.74□□□□□ -1.81
SHPRH-208ENST00000520752 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
SHPRH-208ENST00000520752 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.81
SHPRH-208ENST00000520752 KMT2AQ03164 3969 aa3.71□□□□□ -1.82
SHPRH-208ENST00000520752 APOBP04114 4563 aaKnown RBP3.71□□□□□ -1.82
SHPRH-208ENST00000520752 DNAH5Q8TE73 4624 aa3.69□□□□□ -1.82
SHPRH-208ENST00000520752 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
SHPRH-208ENST00000520752 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
SHPRH-208ENST00000520752 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.83
SHPRH-208ENST00000520752 STARD9Q9P2P6 4700 aa3.63□□□□□ -1.83
SHPRH-208ENST00000520752 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
SHPRH-208ENST00000520752 PKD1P98161 4303 aa3.62□□□□□ -1.83
SHPRH-208ENST00000520752 HERC1Q15751 4861 aa3.61□□□□□ -1.83
SHPRH-208ENST00000520752 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
SHPRH-208ENST00000520752 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-208ENST00000520752 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
SHPRH-208ENST00000520752 TNXBP22105 4242 aa3.59□□□□□ -1.84
SHPRH-208ENST00000520752 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
SHPRH-208ENST00000520752 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SHPRH-208ENST00000520752 HSPG2P98160 4391 aa3.54□□□□□ -1.84
SHPRH-208ENST00000520752 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
SHPRH-208ENST00000520752 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
SHPRH-208ENST00000520752 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.85
SHPRH-208ENST00000520752 FAT1Q14517 4588 aa3.46□□□□□ -1.86
SHPRH-208ENST00000520752 SMR3BP02814 79 aaPredicted RBP3.46□□□□□ -1.86
SHPRH-208ENST00000520752 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
SHPRH-208ENST00000520752 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
SHPRH-208ENST00000520752 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
SHPRH-208ENST00000520752 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
SHPRH-208ENST00000520752 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms