RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 MT2AP02795 61 aa-0.65□□□□□ -2.51
SKP1-207ENST00000520417 MT1MQ8N339 61 aa-0.65□□□□□ -2.51
SKP1-207ENST00000520417 MT1GP13640 62 aa-0.66□□□□□ -2.52
SKP1-207ENST00000520417 ASXL1Q8IXJ9 1541 aa-0.66□□□□□ -2.52
SKP1-207ENST00000520417 DCAF1Q9Y4B6 1507 aa-0.66□□□□□ -2.52
SKP1-207ENST00000520417 XIRP2A4UGR9 3374 aa-0.66□□□□□ -2.52
SKP1-207ENST00000520417 TJP1Q07157 1748 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 ITSN1Q15811 1721 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 CFAP43Q8NDM7 1665 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 MMP24-AS1A0A0U1RRL7 71 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 H3BUA1 57 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 FCER1GP30273 86 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 RPS27P42677 84 aaKnown RBP-0.67□□□□□ -2.52
SKP1-207ENST00000520417 ATXN8Q156A1 80 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 RPS27LQ71UM5 84 aaKnown RBP-0.67□□□□□ -2.52
SKP1-207ENST00000520417 GOLGB1Q14789 3259 aaKnown RBP-0.67□□□□□ -2.52
SKP1-207ENST00000520417 VPS13AQ96RL7 3174 aa-0.67□□□□□ -2.52
SKP1-207ENST00000520417 IGLV5-48A0A075B6I7 105 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 DEFB1P60022 68 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 MT1XP80297 61 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 ANKARQ7Z5J8 1434 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 GNG13Q9P2W3 67 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 C6orf48Q9UBA6 75 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 ANKRD36CQ5JPF3 1778 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 CENPFP49454 3210 aa-0.68□□□□□ -2.52
SKP1-207ENST00000520417 KIAA0586Q9BVV6 1533 aa-0.69□□□□□ -2.52
SKP1-207ENST00000520417 SFTA3P0C7M3 94 aa-0.69□□□□□ -2.52
SKP1-207ENST00000520417 MT1HP80294 61 aa-0.69□□□□□ -2.52
SKP1-207ENST00000520417 LMTK2Q8IWU2 1503 aa-0.69□□□□□ -2.52
SKP1-207ENST00000520417 THOC2Q8NI27 1593 aaKnown RBP-0.7□□□□□ -2.52
SKP1-207ENST00000520417 RB1CC1Q8TDY2 1594 aa-0.7□□□□□ -2.52
SKP1-207ENST00000520417 HILPDAQ9Y5L2 63 aa-0.7□□□□□ -2.52
SKP1-207ENST00000520417 ZC3H13Q5T200 1668 aaKnown RBP-0.71□□□□□ -2.52
SKP1-207ENST00000520417 CD163L1Q9NR16 1453 aa-0.71□□□□□ -2.52
SKP1-207ENST00000520417 TNP1P09430 55 aa-0.71□□□□□ -2.52
SKP1-207ENST00000520417 CLPSL2Q6UWE3 100 aa-0.71□□□□□ -2.52
SKP1-207ENST00000520417 NOP10Q9NPE3 64 aaKnown RBP-0.71□□□□□ -2.52
SKP1-207ENST00000520417 NRAPQ86VF7 1730 aa-0.72□□□□□ -2.52
SKP1-207ENST00000520417 DIP2AQ14689 1571 aa-0.73□□□□□ -2.53
SKP1-207ENST00000520417 MT1EP04732 61 aa-0.73□□□□□ -2.53
SKP1-207ENST00000520417 NCBP2-AS2Q69YL0 99 aa-0.73□□□□□ -2.53
SKP1-207ENST00000520417 TOGARAM1Q9Y4F4 1720 aa-0.73□□□□□ -2.53
SKP1-207ENST00000520417 RRBP1Q9P2E9 1410 aaKnown RBP-0.73□□□□□ -2.53
SKP1-207ENST00000520417 CFAP74Q9C0B2 1584 aa-0.74□□□□□ -2.53
SKP1-207ENST00000520417 PARP4Q9UKK3 1724 aaKnown RBP-0.74□□□□□ -2.53
SKP1-207ENST00000520417 DEFB114Q30KQ6 69 aa-0.74□□□□□ -2.53
SKP1-207ENST00000520417 PDCD5O14737 125 aa-0.75□□□□□ -2.53
SKP1-207ENST00000520417 KRTAP19-5Q3LI72 72 aa-0.75□□□□□ -2.53
SKP1-207ENST00000520417 SMCO4Q9NRQ5 59 aa-0.75□□□□□ -2.53
SKP1-207ENST00000520417 ABCC6O95255 1503 aa-0.75□□□□□ -2.53
SKP1-207ENST00000520417 DNMBPQ6XZF7 1577 aa-0.76□□□□□ -2.53
SKP1-207ENST00000520417 INO80Q9ULG1 1556 aaPredicted RBP-0.76□□□□□ -2.53
SKP1-207ENST00000520417 KIF1AQ12756 1690 aa-0.76□□□□□ -2.53
SKP1-207ENST00000520417 LRRIQ1Q96JM4 1722 aa-0.76□□□□□ -2.53
SKP1-207ENST00000520417 ITSN2Q9NZM3 1697 aa-0.77□□□□□ -2.53
SKP1-207ENST00000520417 RNF17Q9BXT8 1623 aaKnown RBP-0.78□□□□□ -2.53
SKP1-207ENST00000520417 LINC01549A6NIU2 74 aa-0.78□□□□□ -2.53
SKP1-207ENST00000520417 MT1LQ93083 61 aa-0.78□□□□□ -2.53
SKP1-207ENST00000520417 RPS29P62273 56 aaKnown RBP-0.79□□□□□ -2.54
SKP1-207ENST00000520417 ABRACLQ9P1F3 81 aa-0.79□□□□□ -2.54
SKP1-207ENST00000520417 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.79□□□□□ -2.54
SKP1-207ENST00000520417 K7EMI3 77 aa-0.8□□□□□ -2.54
SKP1-207ENST00000520417 ABCA8O94911 1581 aa-0.8□□□□□ -2.54
SKP1-207ENST00000520417 DUOX2Q9NRD8 1548 aa-0.8□□□□□ -2.54
SKP1-207ENST00000520417 CDC42BPGQ6DT37 1551 aa-0.81□□□□□ -2.54
SKP1-207ENST00000520417 M0QY20 66 aa-0.82□□□□□ -2.54
SKP1-207ENST00000520417 LY75O60449 1722 aa-0.82□□□□□ -2.54
SKP1-207ENST00000520417 M0QZ58 72 aa-0.83□□□□□ -2.54
SKP1-207ENST00000520417 DEFB4AO15263 64 aa-0.83□□□□□ -2.54
SKP1-207ENST00000520417 KRTAP19-2Q3LHN2 52 aa-0.83□□□□□ -2.54
SKP1-207ENST00000520417 DEFB104AQ8WTQ1 72 aa-0.83□□□□□ -2.54
SKP1-207ENST00000520417 MYO5CQ9NQX4 1742 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 UGGT2Q9NYU1 1516 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 NHSQ6T4R5 1651 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 M0R1W7 72 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 SERF2P84101 59 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 NMES1Q9C002 83 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 KAAG1Q9UBP8 84 aa-0.84□□□□□ -2.54
SKP1-207ENST00000520417 SMIM27A0A1W2PRY6 76 aa-0.85□□□□□ -2.55
SKP1-207ENST00000520417 A8MTW9 85 aa-0.86□□□□□ -2.55
SKP1-207ENST00000520417 SPART-AS1P0CW21 52 aa-0.87□□□□□ -2.55
SKP1-207ENST00000520417 LINC00308Q8TCZ7 52 aa-0.87□□□□□ -2.55
SKP1-207ENST00000520417 TMEM167BQ9NRX6 74 aa-0.87□□□□□ -2.55
SKP1-207ENST00000520417 CDC42BPAQ5VT25 1732 aa-0.87□□□□□ -2.55
SKP1-207ENST00000520417 CLASP1Q7Z460 1538 aa-0.88□□□□□ -2.55
SKP1-207ENST00000520417 MAST1Q9Y2H9 1570 aa-0.88□□□□□ -2.55
SKP1-207ENST00000520417 C3P01024 1663 aa-0.88□□□□□ -2.55
SKP1-207ENST00000520417 IQGAP3Q86VI3 1631 aa-0.89□□□□□ -2.55
SKP1-207ENST00000520417 MROH1Q8NDA8 1641 aa-0.89□□□□□ -2.55
SKP1-207ENST00000520417 ABCA9Q8IUA7 1624 aa-0.89□□□□□ -2.55
SKP1-207ENST00000520417 WFDC10BQ8IUB3 73 aa-0.9□□□□□ -2.55
SKP1-207ENST00000520417 TTTY10Q9BZA0 68 aa-0.9□□□□□ -2.55
SKP1-207ENST00000520417 GLI2P10070 1586 aa-0.91□□□□□ -2.55
SKP1-207ENST00000520417 EEA1Q15075 1411 aa-0.92□□□□□ -2.56
SKP1-207ENST00000520417 LINC01546A6NGU7 62 aa-0.93□□□□□ -2.56
SKP1-207ENST00000520417 MADDQ8WXG6 1647 aa-0.93□□□□□ -2.56
SKP1-207ENST00000520417 TIAM1Q13009 1591 aa-0.94□□□□□ -2.56
SKP1-207ENST00000520417 IGIPA6NJ69 53 aa-0.94□□□□□ -2.56
SKP1-207ENST00000520417 H0YGX0 51 aa-0.95□□□□□ -2.56
SKP1-207ENST00000520417 CROCC2H7BZ55 1655 aa-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms