RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 SPINK7P58062 85 aa3.24□□□□□ -1.89
CTNNA1-219ENST00000520158 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
CTNNA1-219ENST00000520158 IGLV7-46A0A075B6I9 117 aa3.23□□□□□ -1.89
CTNNA1-219ENST00000520158 SPRR1AP35321 89 aa3.23□□□□□ -1.89
CTNNA1-219ENST00000520158 PRLHP81277 87 aa3.23□□□□□ -1.89
CTNNA1-219ENST00000520158 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.23□□□□□ -1.89
CTNNA1-219ENST00000520158 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
CTNNA1-219ENST00000520158 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
CTNNA1-219ENST00000520158 KCNQ1DNQ9H478 68 aa3.22□□□□□ -1.89
CTNNA1-219ENST00000520158 H3BQ85 93 aa3.21□□□□□ -1.9
CTNNA1-219ENST00000520158 LINC00483Q53H64 154 aa3.21□□□□□ -1.9
CTNNA1-219ENST00000520158 SPINK1P00995 79 aa3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 LINC00158P58513 81 aa3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
CTNNA1-219ENST00000520158 ETDCA0A1B0GVM5 59 aa3.19□□□□□ -1.9
CTNNA1-219ENST00000520158 H0Y9P7 68 aa3.19□□□□□ -1.9
CTNNA1-219ENST00000520158 SSBP3-AS1Q7Z2R9 100 aa3.19□□□□□ -1.9
CTNNA1-219ENST00000520158 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
CTNNA1-219ENST00000520158 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
CTNNA1-219ENST00000520158 IGLV8-61A0A075B6I0 122 aa3.18□□□□□ -1.9
CTNNA1-219ENST00000520158 H3BPC8 53 aa3.18□□□□□ -1.9
CTNNA1-219ENST00000520158 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
CTNNA1-219ENST00000520158 SMIM11BQ8TCY0 68 aa3.18□□□□□ -1.9
CTNNA1-219ENST00000520158 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CTNNA1-219ENST00000520158 Q8NBF4 154 aa3.17□□□□□ -1.9
CTNNA1-219ENST00000520158 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
CTNNA1-219ENST00000520158 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CTNNA1-219ENST00000520158 COA5Q86WW8 74 aa3.16□□□□□ -1.9
CTNNA1-219ENST00000520158 Q8N377 158 aa3.16□□□□□ -1.9
CTNNA1-219ENST00000520158 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CTNNA1-219ENST00000520158 Q6ZRX8 168 aa3.15□□□□□ -1.91
CTNNA1-219ENST00000520158 KRTAP4-1Q9BYQ7 146 aa3.15□□□□□ -1.91
CTNNA1-219ENST00000520158 A8MUU9 505 aa3.14□□□□□ -1.91
CTNNA1-219ENST00000520158 IGLV6-57P01721 117 aa3.14□□□□□ -1.91
CTNNA1-219ENST00000520158 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
CTNNA1-219ENST00000520158 UQCR11O14957 56 aa3.12□□□□□ -1.91
CTNNA1-219ENST00000520158 SPRR1BP22528 89 aa3.12□□□□□ -1.91
CTNNA1-219ENST00000520158 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
CTNNA1-219ENST00000520158 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
CTNNA1-219ENST00000520158 COX7BP24311 80 aa3.08□□□□□ -1.92
CTNNA1-219ENST00000520158 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
CTNNA1-219ENST00000520158 Q5W150 140 aa3.08□□□□□ -1.92
CTNNA1-219ENST00000520158 Q8N9L7 120 aa3.08□□□□□ -1.92
CTNNA1-219ENST00000520158 MT1HP80294 61 aa3.06□□□□□ -1.92
CTNNA1-219ENST00000520158 LINC00575Q6W349 94 aa3.06□□□□□ -1.92
CTNNA1-219ENST00000520158 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
CTNNA1-219ENST00000520158 FSIP2Q5CZC0 6907 aa3.04□□□□□ -1.92
CTNNA1-219ENST00000520158 IGLV5-48A0A075B6I7 105 aa3.04□□□□□ -1.92
CTNNA1-219ENST00000520158 PCOTHQ58A44 107 aa3.04□□□□□ -1.92
CTNNA1-219ENST00000520158 LINC00472Q9H8W2 130 aa3.03□□□□□ -1.92
CTNNA1-219ENST00000520158 Q6ZQY7 126 aa3.02□□□□□ -1.93
CTNNA1-219ENST00000520158 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
CTNNA1-219ENST00000520158 KRTAP10-6P60371 365 aaPredicted RBP3.01□□□□□ -1.93
CTNNA1-219ENST00000520158 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
CTNNA1-219ENST00000520158 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
CTNNA1-219ENST00000520158 DEFB105AQ8NG35 78 aa3□□□□□ -1.93
CTNNA1-219ENST00000520158 A0A1B0GU69 56 aa2.99□□□□□ -1.93
CTNNA1-219ENST00000520158 HRES1P13985 223 aa2.99□□□□□ -1.93
CTNNA1-219ENST00000520158 A0A0G2JQZ4 141 aa2.97□□□□□ -1.93
CTNNA1-219ENST00000520158 A0A1B0GU33 70 aa2.97□□□□□ -1.93
CTNNA1-219ENST00000520158 DSCR10P59022 87 aa2.97□□□□□ -1.93
CTNNA1-219ENST00000520158 FLGP20930 4061 aaPredicted RBP2.96□□□□□ -1.94
CTNNA1-219ENST00000520158 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CTNNA1-219ENST00000520158 Q96NJ1 140 aa2.95□□□□□ -1.94
CTNNA1-219ENST00000520158 M0R2T5 61 aa2.94□□□□□ -1.94
CTNNA1-219ENST00000520158 IGFL1Q6UW32 110 aa2.94□□□□□ -1.94
CTNNA1-219ENST00000520158 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
CTNNA1-219ENST00000520158 K7EQZ3 153 aa2.92□□□□□ -1.94
CTNNA1-219ENST00000520158 ACYP2P14621 99 aa2.89□□□□□ -1.95
CTNNA1-219ENST00000520158 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
CTNNA1-219ENST00000520158 USH2AO75445 5202 aa2.88□□□□□ -1.95
CTNNA1-219ENST00000520158 TP53AIP1Q9HCN2 124 aa2.87□□□□□ -1.95
CTNNA1-219ENST00000520158 PRO2289Q9P1D8 64 aa2.86□□□□□ -1.95
CTNNA1-219ENST00000520158 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
CTNNA1-219ENST00000520158 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
CTNNA1-219ENST00000520158 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
CTNNA1-219ENST00000520158 MT2AP02795 61 aa2.83□□□□□ -1.96
CTNNA1-219ENST00000520158 IGKV2-30P06310 120 aa2.82□□□□□ -1.96
CTNNA1-219ENST00000520158 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
CTNNA1-219ENST00000520158 MT1FP04733 61 aa2.8□□□□□ -1.96
CTNNA1-219ENST00000520158 CRIPTQ9P021 101 aa2.78□□□□□ -1.96
CTNNA1-219ENST00000520158 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
CTNNA1-219ENST00000520158 R4GN34 69 aa2.77□□□□□ -1.97
CTNNA1-219ENST00000520158 MMP24-AS1A0A0U1RRL7 71 aa2.75□□□□□ -1.97
CTNNA1-219ENST00000520158 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
CTNNA1-219ENST00000520158 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
CTNNA1-219ENST00000520158 H0YAA0 97 aa2.73□□□□□ -1.97
CTNNA1-219ENST00000520158 IGKV2D-30A0A075B6S6 120 aa2.72□□□□□ -1.97
CTNNA1-219ENST00000520158 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
CTNNA1-219ENST00000520158 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CTNNA1-219ENST00000520158 PLAC4Q8WY50 150 aa2.7□□□□□ -1.98
CTNNA1-219ENST00000520158 MRPL34Q9BQ48 92 aaKnown RBP2.7□□□□□ -1.98
CTNNA1-219ENST00000520158 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
CTNNA1-219ENST00000520158 INE1O15225 51 aa2.67□□□□□ -1.98
CTNNA1-219ENST00000520158 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
CTNNA1-219ENST00000520158 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
CTNNA1-219ENST00000520158 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms