RNA–Protein interactions for RNA: ENST00000519600.1

KHDRBS3-205, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 1 (best)

Gene KHDRBS3, Length 5,466 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-205ENST00000519600 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
KHDRBS3-205ENST00000519600 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
KHDRBS3-205ENST00000519600 DNAH11Q96DT5 4516 aa2.32□□□□□ -2.04
KHDRBS3-205ENST00000519600 PLECQ15149 4684 aaKnown RBP2.31□□□□□ -2.04
KHDRBS3-205ENST00000519600 CUBNO60494 3623 aa2.3□□□□□ -2.04
KHDRBS3-205ENST00000519600 CSMD2Q7Z408 3487 aa2.29□□□□□ -2.04
KHDRBS3-205ENST00000519600 TRRAPQ9Y4A5 3859 aa2.29□□□□□ -2.04
KHDRBS3-205ENST00000519600 KRTAP19-4Q3LI73 84 aa2.28□□□□□ -2.04
KHDRBS3-205ENST00000519600 PRKDCP78527 4128 aaKnown RBP2.27□□□□□ -2.05
KHDRBS3-205ENST00000519600 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
KHDRBS3-205ENST00000519600 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
KHDRBS3-205ENST00000519600 KRTAP12-1P59990 96 aa2.26□□□□□ -2.05
KHDRBS3-205ENST00000519600 TGP01266 2768 aa2.25□□□□□ -2.05
KHDRBS3-205ENST00000519600 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
KHDRBS3-205ENST00000519600 TNP1P09430 55 aa2.24□□□□□ -2.05
KHDRBS3-205ENST00000519600 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
KHDRBS3-205ENST00000519600 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
KHDRBS3-205ENST00000519600 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
KHDRBS3-205ENST00000519600 STARD9Q9P2P6 4700 aa2.22□□□□□ -2.05
KHDRBS3-205ENST00000519600 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
KHDRBS3-205ENST00000519600 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
KHDRBS3-205ENST00000519600 SRRM2Q9UQ35 2752 aaKnown RBP2.21□□□□□ -2.06
KHDRBS3-205ENST00000519600 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
KHDRBS3-205ENST00000519600 CSMD3Q7Z407 3707 aa2.19□□□□□ -2.06
KHDRBS3-205ENST00000519600 BIRC6Q9NR09 4857 aa2.17□□□□□ -2.06
KHDRBS3-205ENST00000519600 APOBP04114 4563 aaKnown RBP2.15□□□□□ -2.06
KHDRBS3-205ENST00000519600 LRP1BQ9NZR2 4599 aa2.15□□□□□ -2.07
KHDRBS3-205ENST00000519600 FAT2Q9NYQ8 4349 aa2.14□□□□□ -2.07
KHDRBS3-205ENST00000519600 LYSTQ99698 3801 aa2.14□□□□□ -2.07
KHDRBS3-205ENST00000519600 FRAS1Q86XX4 4008 aa2.13□□□□□ -2.07
KHDRBS3-205ENST00000519600 PKD1P98161 4303 aa2.12□□□□□ -2.07
KHDRBS3-205ENST00000519600 COL7A1Q02388 2944 aa2.12□□□□□ -2.07
KHDRBS3-205ENST00000519600 KRTAP9-6A0A140TA67 174 aa2.12□□□□□ -2.07
KHDRBS3-205ENST00000519600 LCE2CQ5TA81 110 aa2.12□□□□□ -2.07
KHDRBS3-205ENST00000519600 FAT1Q14517 4588 aa2.12□□□□□ -2.07
KHDRBS3-205ENST00000519600 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
KHDRBS3-205ENST00000519600 DNHD1Q96M86 4753 aa2.1□□□□□ -2.07
KHDRBS3-205ENST00000519600 CRCT1Q9UGL9 99 aa2.1□□□□□ -2.07
KHDRBS3-205ENST00000519600 PKHD1P08F94 4074 aa2.1□□□□□ -2.07
KHDRBS3-205ENST00000519600 TNXBP22105 4242 aa2.09□□□□□ -2.08
KHDRBS3-205ENST00000519600 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
KHDRBS3-205ENST00000519600 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
KHDRBS3-205ENST00000519600 HSPG2P98160 4391 aa2.08□□□□□ -2.08
KHDRBS3-205ENST00000519600 LCE2BO14633 110 aa2.08□□□□□ -2.08
KHDRBS3-205ENST00000519600 MT3P25713 68 aa2.08□□□□□ -2.08
KHDRBS3-205ENST00000519600 MT1HP80294 61 aa2.07□□□□□ -2.08
KHDRBS3-205ENST00000519600 KRTAP9-2Q9BYQ4 174 aa2.07□□□□□ -2.08
KHDRBS3-205ENST00000519600 LORP23490 312 aaPredicted RBP2.06□□□□□ -2.08
KHDRBS3-205ENST00000519600 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
KHDRBS3-205ENST00000519600 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
KHDRBS3-205ENST00000519600 MYCBP2O75592 4640 aa2.04□□□□□ -2.08
KHDRBS3-205ENST00000519600 LRP1Q07954 4544 aaKnown RBP2.04□□□□□ -2.08
KHDRBS3-205ENST00000519600 RYR2Q92736 4967 aa2.04□□□□□ -2.08
KHDRBS3-205ENST00000519600 PCLOQ9Y6V0 5065 aa2.01□□□□□ -2.09
KHDRBS3-205ENST00000519600 HERC1Q15751 4861 aa2.01□□□□□ -2.09
KHDRBS3-205ENST00000519600 RYR1P21817 5038 aa1.99□□□□□ -2.09
KHDRBS3-205ENST00000519600 HERC2O95714 4834 aa1.99□□□□□ -2.09
KHDRBS3-205ENST00000519600 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
KHDRBS3-205ENST00000519600 HYDINQ4G0P3 5121 aa1.98□□□□□ -2.09
KHDRBS3-205ENST00000519600 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
KHDRBS3-205ENST00000519600 MUC17Q685J3 4493 aa1.96□□□□□ -2.1
KHDRBS3-205ENST00000519600 MT2AP02795 61 aa1.96□□□□□ -2.1
KHDRBS3-205ENST00000519600 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
KHDRBS3-205ENST00000519600 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
KHDRBS3-205ENST00000519600 SPRR2EP22531 72 aa1.93□□□□□ -2.1
KHDRBS3-205ENST00000519600 SPRR2BP35325 72 aa1.93□□□□□ -2.1
KHDRBS3-205ENST00000519600 SPRR2AP35326 72 aa1.93□□□□□ -2.1
KHDRBS3-205ENST00000519600 KRTAP4-1Q9BYQ7 146 aa1.92□□□□□ -2.1
KHDRBS3-205ENST00000519600 KRTAP9-7A8MTY7 169 aa1.92□□□□□ -2.1
KHDRBS3-205ENST00000519600 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
KHDRBS3-205ENST00000519600 RYR3Q15413 4870 aa1.9□□□□□ -2.11
KHDRBS3-205ENST00000519600 SPRR2DP22532 72 aa1.9□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP19-8Q3LI54 63 aa1.88□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP10-7P60409 375 aaPredicted RBP1.88□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP19-1Q8IUB9 90 aa1.88□□□□□ -2.11
KHDRBS3-205ENST00000519600 MT1FP04733 61 aa1.87□□□□□ -2.11
KHDRBS3-205ENST00000519600 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
KHDRBS3-205ENST00000519600 KMT2CQ8NEZ4 4911 aaKnown RBP1.86□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
KHDRBS3-205ENST00000519600 KIAA1109Q2LD37 5005 aa1.85□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
KHDRBS3-205ENST00000519600 KRTAP10-5P60370 271 aa1.84□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
KHDRBS3-205ENST00000519600 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.8□□□□□ -2.12
KHDRBS3-205ENST00000519600 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP9-8Q9BYQ0 159 aa1.78□□□□□ -2.12
KHDRBS3-205ENST00000519600 KRTAP9-3Q9BYQ3 159 aa1.77□□□□□ -2.13
KHDRBS3-205ENST00000519600 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
KHDRBS3-205ENST00000519600 LRP2P98164 4655 aa1.77□□□□□ -2.13
KHDRBS3-205ENST00000519600 LOC100996750A0A140TA64 210 aa1.75□□□□□ -2.13
KHDRBS3-205ENST00000519600 MT1XP80297 61 aa1.75□□□□□ -2.13
KHDRBS3-205ENST00000519600 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
KHDRBS3-205ENST00000519600 MT1BP07438 61 aa1.74□□□□□ -2.13
KHDRBS3-205ENST00000519600 LCE3CQ5T5A8 94 aa1.74□□□□□ -2.13
KHDRBS3-205ENST00000519600 KRTAP2-2Q9BYT5 123 aa1.72□□□□□ -2.13
KHDRBS3-205ENST00000519600 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms