RNA–Protein interactions for RNA: ENST00000518905.1

CLMAT3-202, colorectal liver metastasis associated transcript 3, humanhuman

TSL 3

Gene CLMAT3, Length 410 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-202ENST00000518905 A0A1B0GVY2 172 aa1.7□□□□□ -2.14
CLMAT3-202ENST00000518905 HERC1Q15751 4861 aa1.7□□□□□ -2.14
CLMAT3-202ENST00000518905 TENM2Q9NT68 2774 aa1.7□□□□□ -2.14
CLMAT3-202ENST00000518905 DNAH1Q9P2D7 4330 aa1.7□□□□□ -2.14
CLMAT3-202ENST00000518905 VWFP04275 2813 aa1.69□□□□□ -2.14
CLMAT3-202ENST00000518905 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
CLMAT3-202ENST00000518905 DYNC2H1Q8NCM8 4307 aaKnown RBP1.69□□□□□ -2.14
CLMAT3-202ENST00000518905 H3BUX3 64 aa1.68□□□□□ -2.14
CLMAT3-202ENST00000518905 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
CLMAT3-202ENST00000518905 PLCE1Q9P212 2302 aa1.68□□□□□ -2.14
CLMAT3-202ENST00000518905 CMYA5Q8N3K9 4069 aa1.68□□□□□ -2.14
CLMAT3-202ENST00000518905 ROS1P08922 2347 aa1.66□□□□□ -2.14
CLMAT3-202ENST00000518905 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
CLMAT3-202ENST00000518905 SPINK1P00995 79 aa1.66□□□□□ -2.14
CLMAT3-202ENST00000518905 KRTAP10-12P60413 245 aa1.66□□□□□ -2.14
CLMAT3-202ENST00000518905 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
CLMAT3-202ENST00000518905 HRNRQ86YZ3 2850 aaPredicted RBP1.65□□□□□ -2.14
CLMAT3-202ENST00000518905 S4R3F8 94 aa1.65□□□□□ -2.15
CLMAT3-202ENST00000518905 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
CLMAT3-202ENST00000518905 NOP10Q9NPE3 64 aaKnown RBP1.63□□□□□ -2.15
CLMAT3-202ENST00000518905 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
CLMAT3-202ENST00000518905 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
CLMAT3-202ENST00000518905 COL7A1Q02388 2944 aa1.62□□□□□ -2.15
CLMAT3-202ENST00000518905 FLG2Q5D862 2391 aaPredicted RBP1.62□□□□□ -2.15
CLMAT3-202ENST00000518905 PRO0255Q9UI72 69 aa1.61□□□□□ -2.15
CLMAT3-202ENST00000518905 PLECQ15149 4684 aaKnown RBP1.61□□□□□ -2.15
CLMAT3-202ENST00000518905 CSMD3Q7Z407 3707 aa1.61□□□□□ -2.15
CLMAT3-202ENST00000518905 KRTAP10-3P60369 221 aa1.6□□□□□ -2.15
CLMAT3-202ENST00000518905 DEFB136Q30KP8 78 aa1.6□□□□□ -2.15
CLMAT3-202ENST00000518905 LYSTQ99698 3801 aa1.6□□□□□ -2.15
CLMAT3-202ENST00000518905 HECTD4Q9Y4D8 3996 aa1.59□□□□□ -2.15
CLMAT3-202ENST00000518905 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.16
CLMAT3-202ENST00000518905 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
CLMAT3-202ENST00000518905 A0A0D9SG42 100 aa1.58□□□□□ -2.16
CLMAT3-202ENST00000518905 Q5VSD8 79 aa1.58□□□□□ -2.16
CLMAT3-202ENST00000518905 FRAS1Q86XX4 4008 aa1.58□□□□□ -2.16
CLMAT3-202ENST00000518905 WNK2Q9Y3S1 2297 aa1.57□□□□□ -2.16
CLMAT3-202ENST00000518905 MUC2Q02817 5179 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 HMCN2Q8NDA2 5059 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 KRTAP10-1P60331 282 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 KRTAP10-6P60371 365 aaPredicted RBP1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 LCE3CQ5T5A8 94 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 DNAH10Q8IVF4 4471 aa1.56□□□□□ -2.16
CLMAT3-202ENST00000518905 DNAH3Q8TD57 4116 aa1.55□□□□□ -2.16
CLMAT3-202ENST00000518905 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
CLMAT3-202ENST00000518905 DYNC1H1Q14204 4646 aaKnown RBP1.54□□□□□ -2.16
CLMAT3-202ENST00000518905 DNAH7Q8WXX0 4024 aa1.54□□□□□ -2.16
CLMAT3-202ENST00000518905 A0A096LNI7 61 aa1.53□□□□□ -2.16
CLMAT3-202ENST00000518905 LCE1EQ5T753 118 aa1.53□□□□□ -2.16
CLMAT3-202ENST00000518905 HUWE1Q7Z6Z7 4374 aaKnown RBP1.53□□□□□ -2.16
CLMAT3-202ENST00000518905 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
CLMAT3-202ENST00000518905 A0A096LPF7 62 aa1.52□□□□□ -2.17
CLMAT3-202ENST00000518905 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
CLMAT3-202ENST00000518905 DMBT1Q9UGM3 2413 aaPredicted RBP1.52□□□□□ -2.17
CLMAT3-202ENST00000518905 M0QZ58 72 aa1.51□□□□□ -2.17
CLMAT3-202ENST00000518905 KRTAP10-5P60370 271 aa1.51□□□□□ -2.17
CLMAT3-202ENST00000518905 SPINK6Q6UWN8 80 aa1.51□□□□□ -2.17
CLMAT3-202ENST00000518905 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
CLMAT3-202ENST00000518905 KMT2AQ03164 3969 aa1.5□□□□□ -2.17
CLMAT3-202ENST00000518905 HSPG2P98160 4391 aa1.5□□□□□ -2.17
CLMAT3-202ENST00000518905 DNAH5Q8TE73 4624 aa1.49□□□□□ -2.17
CLMAT3-202ENST00000518905 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
CLMAT3-202ENST00000518905 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
CLMAT3-202ENST00000518905 SRRM2Q9UQ35 2752 aaKnown RBP1.49□□□□□ -2.17
CLMAT3-202ENST00000518905 H3BNG1 76 aa1.48□□□□□ -2.17
CLMAT3-202ENST00000518905 DNAH2Q9P225 4427 aa1.47□□□□□ -2.17
CLMAT3-202ENST00000518905 FAT1Q14517 4588 aa1.47□□□□□ -2.17
CLMAT3-202ENST00000518905 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
CLMAT3-202ENST00000518905 LRP1BQ9NZR2 4599 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 LINC01556Q5JQF7 62 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
CLMAT3-202ENST00000518905 KRTAP10-10P60014 251 aa1.44□□□□□ -2.18
CLMAT3-202ENST00000518905 LRP2P98164 4655 aa1.43□□□□□ -2.18
CLMAT3-202ENST00000518905 SPART-AS1P0CW21 52 aa1.43□□□□□ -2.18
CLMAT3-202ENST00000518905 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
CLMAT3-202ENST00000518905 PKD1P98161 4303 aa1.42□□□□□ -2.18
CLMAT3-202ENST00000518905 KRTAP10-7P60409 375 aaPredicted RBP1.41□□□□□ -2.18
CLMAT3-202ENST00000518905 LCE3EQ5T5B0 92 aa1.4□□□□□ -2.19
CLMAT3-202ENST00000518905 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
CLMAT3-202ENST00000518905 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
CLMAT3-202ENST00000518905 SMR3BP02814 79 aaPredicted RBP1.37□□□□□ -2.19
CLMAT3-202ENST00000518905 HTN3P15516 51 aa1.37□□□□□ -2.19
CLMAT3-202ENST00000518905 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
CLMAT3-202ENST00000518905 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
CLMAT3-202ENST00000518905 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
CLMAT3-202ENST00000518905 TNP1P09430 55 aa1.35□□□□□ -2.19
CLMAT3-202ENST00000518905 FAT3Q8TDW7 4589 aa1.34□□□□□ -2.19
CLMAT3-202ENST00000518905 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
CLMAT3-202ENST00000518905 KRTAP9-6A8MVA2 160 aa1.33□□□□□ -2.2
CLMAT3-202ENST00000518905 DEFB4AO15263 64 aa1.31□□□□□ -2.2
CLMAT3-202ENST00000518905 RPS29P62273 56 aaKnown RBP1.31□□□□□ -2.2
CLMAT3-202ENST00000518905 DEFB135Q30KP9 77 aa1.3□□□□□ -2.2
CLMAT3-202ENST00000518905 LPAP08519 4548 aa1.3□□□□□ -2.2
CLMAT3-202ENST00000518905 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
CLMAT3-202ENST00000518905 SSPOA2VEC9 5147 aa1.29□□□□□ -2.2
CLMAT3-202ENST00000518905 USH2AO75445 5202 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms