RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 SNAPINO95295 136 aa0.4□□□□□ -2.35
RNU1-48P-201ENST00000516400 IFITM1P13164 125 aa0.4□□□□□ -2.35
RNU1-48P-201ENST00000516400 VAMP3Q15836 100 aa0.4□□□□□ -2.35
RNU1-48P-201ENST00000516400 CAMK2N1Q7Z7J9 78 aa0.4□□□□□ -2.35
RNU1-48P-201ENST00000516400 SMCO4Q9NRQ5 59 aa0.4□□□□□ -2.35
RNU1-48P-201ENST00000516400 TRACP01848 142 aa0.39□□□□□ -2.35
RNU1-48P-201ENST00000516400 PMCHL2Q9BQD1 86 aa0.39□□□□□ -2.35
RNU1-48P-201ENST00000516400 TRGC2P03986 189 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 PLNP26678 52 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 SLC51BQ86UW2 128 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 S100ZQ8WXG8 99 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 HIST1H4GQ99525 98 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 SEC11CQ9BY50 192 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 CYP4F30PQ9H0H9 118 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 MUC16Q8WXI7 14507 aa0.38□□□□□ -2.35
RNU1-48P-201ENST00000516400 NDUFS5O43920 106 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 DPM2O94777 84 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 IGKCP01834 107 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 BVES-AS1Q5T3Y7 98 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 C20orf197Q8N268 126 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 C12orf57Q99622 126 aa0.37□□□□□ -2.35
RNU1-48P-201ENST00000516400 FABP9Q0Z7S8 132 aa0.36□□□□□ -2.35
RNU1-48P-201ENST00000516400 BATFQ16520 125 aa0.36□□□□□ -2.35
RNU1-48P-201ENST00000516400 A0A1B0GX51 115 aa0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 K7EP34 96 aa0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 MT-ATP8P03928 68 aa0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 FABP2P12104 132 aa0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 COX19Q49B96 90 aa0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 CHCHD1Q96BP2 118 aaKnown RBP0.35□□□□□ -2.35
RNU1-48P-201ENST00000516400 A0A1B0GV72 72 aa0.34□□□□□ -2.36
RNU1-48P-201ENST00000516400 H0YGX0 51 aa0.34□□□□□ -2.36
RNU1-48P-201ENST00000516400 LEPROTL1O95214 131 aa0.34□□□□□ -2.36
RNU1-48P-201ENST00000516400 MT-ND4LP03901 98 aa0.34□□□□□ -2.36
RNU1-48P-201ENST00000516400 TCTE3Q8IZS6 198 aa0.34□□□□□ -2.36
RNU1-48P-201ENST00000516400 A0A1B0GW54 56 aa0.33□□□□□ -2.36
RNU1-48P-201ENST00000516400 H0Y8G0 127 aa0.33□□□□□ -2.36
RNU1-48P-201ENST00000516400 KRTAP25-1Q3LHN0 102 aa0.33□□□□□ -2.36
RNU1-48P-201ENST00000516400 PEA15Q15121 130 aa0.32□□□□□ -2.36
RNU1-48P-201ENST00000516400 UQCC3Q6UW78 93 aa0.32□□□□□ -2.36
RNU1-48P-201ENST00000516400 COPS9Q8WXC6 57 aa0.32□□□□□ -2.36
RNU1-48P-201ENST00000516400 NAA38Q9BRA0 125 aaKnown RBP0.32□□□□□ -2.36
RNU1-48P-201ENST00000516400 LINC01545Q5VT33 79 aa0.31□□□□□ -2.36
RNU1-48P-201ENST00000516400 SPINT4Q6UDR6 99 aa0.31□□□□□ -2.36
RNU1-48P-201ENST00000516400 CASC2Q6XLA1 102 aa0.31□□□□□ -2.36
RNU1-48P-201ENST00000516400 VPS25Q9BRG1 176 aa0.31□□□□□ -2.36
RNU1-48P-201ENST00000516400 TMEM256-PLSCR3K7ERE1 68 aa0.3□□□□□ -2.36
RNU1-48P-201ENST00000516400 KRTAP12-1P59990 96 aa0.3□□□□□ -2.36
RNU1-48P-201ENST00000516400 ACYP1P07311 99 aa0.29□□□□□ -2.36
RNU1-48P-201ENST00000516400 FABP4P15090 132 aa0.29□□□□□ -2.36
RNU1-48P-201ENST00000516400 SCGB1D4Q6XE38 83 aa0.29□□□□□ -2.36
RNU1-48P-201ENST00000516400 ORMDL1Q9P0S3 153 aa0.29□□□□□ -2.36
RNU1-48P-201ENST00000516400 C9JAW5 83 aa0.28□□□□□ -2.36
RNU1-48P-201ENST00000516400 SYS1-DBNDD2H3BUS1 97 aa0.28□□□□□ -2.36
RNU1-48P-201ENST00000516400 HSBP1O75506 76 aa0.28□□□□□ -2.36
RNU1-48P-201ENST00000516400 TNP1P09430 55 aa0.28□□□□□ -2.36
RNU1-48P-201ENST00000516400 HIGD1BQ9P298 99 aa0.28□□□□□ -2.36
RNU1-48P-201ENST00000516400 H3BQ85 93 aa0.27□□□□□ -2.37
RNU1-48P-201ENST00000516400 BPY2O14599 106 aa0.27□□□□□ -2.37
RNU1-48P-201ENST00000516400 TRAV22A0A0B4J277 110 aa0.26□□□□□ -2.37
RNU1-48P-201ENST00000516400 NREPQ16612 68 aa0.26□□□□□ -2.37
RNU1-48P-201ENST00000516400 SNCGO76070 127 aa0.25□□□□□ -2.37
RNU1-48P-201ENST00000516400 TP53AIP1Q9HCN2 124 aa0.25□□□□□ -2.37
RNU1-48P-201ENST00000516400 A0A0B4J2C4 111 aa0.24□□□□□ -2.37
RNU1-48P-201ENST00000516400 LOC101927531A0A1B0GV80 90 aa0.24□□□□□ -2.37
RNU1-48P-201ENST00000516400 SPANXA2-OT1Q8N9U9 137 aa0.24□□□□□ -2.37
RNU1-48P-201ENST00000516400 S100PP25815 95 aa0.23□□□□□ -2.37
RNU1-48P-201ENST00000516400 TMEM218A2RU14 115 aa0.22□□□□□ -2.37
RNU1-48P-201ENST00000516400 DMAC1Q96GE9 116 aa0.21□□□□□ -2.38
RNU1-48P-201ENST00000516400 DNAL4O96015 105 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 BAALC-AS2P0C853 105 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 RGS21Q2M5E4 152 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 HIST3H2BBQ8N257 126 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 C14orf132Q9NPU4 83 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 PRO1854Q9UHT4 67 aa0.2□□□□□ -2.38
RNU1-48P-201ENST00000516400 JMJD7-PLA2G4BH0Y9G9 81 aa0.19□□□□□ -2.38
RNU1-48P-201ENST00000516400 SPATA8Q6RVD6 105 aa0.19□□□□□ -2.38
RNU1-48P-201ENST00000516400 ATOH7Q8N100 152 aa0.19□□□□□ -2.38
RNU1-48P-201ENST00000516400 KRTDAPP60985 99 aa0.18□□□□□ -2.38
RNU1-48P-201ENST00000516400 HIST1H2BLQ99880 126 aa0.18□□□□□ -2.38
RNU1-48P-201ENST00000516400 PCP4L1A6NKN8 68 aa0.17□□□□□ -2.38
RNU1-48P-201ENST00000516400 FXYD2P54710 66 aa0.16□□□□□ -2.38
RNU1-48P-201ENST00000516400 LINC00208Q96KT6 92 aa0.16□□□□□ -2.38
RNU1-48P-201ENST00000516400 TRAV7A0A075B6U4 112 aa0.15□□□□□ -2.39
RNU1-48P-201ENST00000516400 DLEU1O43261 78 aa0.15□□□□□ -2.39
RNU1-48P-201ENST00000516400 H0Y9P7 68 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BKO60814 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BJP06899 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 COX8AP10176 69 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BOP23527 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BBP33778 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BDP58876 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BCP62807 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST2H2BEQ16778 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 CLLU1Q5K131 121 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BHQ93079 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BNQ99877 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 HIST1H2BMQ99879 126 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 SPCS1Q9Y6A9 102 aa0.13□□□□□ -2.39
RNU1-48P-201ENST00000516400 K7ERJ3 54 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms